{"id":"https://openalex.org/W4377092107","doi":"https://doi.org/10.3233/shti230074","title":"An Annotation Workbench for Semantic Annotation of Data Collection Instruments","display_name":"An Annotation Workbench for Semantic Annotation of Data Collection Instruments","publication_year":2023,"publication_date":"2023-05-18","ids":{"openalex":"https://openalex.org/W4377092107","doi":"https://doi.org/10.3233/shti230074","pmid":"https://pubmed.ncbi.nlm.nih.gov/37203619"},"language":"en","primary_location":{"id":"doi:10.3233/shti230074","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti230074","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230074","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230074","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056549628","display_name":"Julia Sasse","orcid":"https://orcid.org/0000-0002-0660-7597"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I2802983449","display_name":"Centre for Life","ror":"https://ror.org/027tbp210","country_code":"GB","type":"other","lineage":["https://openalex.org/I2802983449"]},{"id":"https://openalex.org/I4210112663","display_name":"ZB MED - Information Centre for Life Sciences","ror":"https://ror.org/0259fwx54","country_code":"DE","type":"archive","lineage":["https://openalex.org/I4210112663"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Julia Sasse","raw_affiliation_strings":["ZB MED \u2013 Information Centre for Life Sciences https://ror.org/0259fwx54","University of Bonn, Germany"],"raw_orcid":"https://orcid.org/0000-0002-0660-7597","affiliations":[{"raw_affiliation_string":"ZB MED \u2013 Information Centre for Life Sciences https://ror.org/0259fwx54","institution_ids":["https://openalex.org/I2802983449","https://openalex.org/I4210112663"]},{"raw_affiliation_string":"University of Bonn, Germany","institution_ids":["https://openalex.org/I135140700"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077378114","display_name":"Juliane Fluck","orcid":"https://orcid.org/0000-0003-1379-7023"},"institutions":[{"id":"https://openalex.org/I135140700","display_name":"University of Bonn","ror":"https://ror.org/041nas322","country_code":"DE","type":"education","lineage":["https://openalex.org/I135140700"]},{"id":"https://openalex.org/I2802983449","display_name":"Centre for Life","ror":"https://ror.org/027tbp210","country_code":"GB","type":"other","lineage":["https://openalex.org/I2802983449"]},{"id":"https://openalex.org/I4210112663","display_name":"ZB MED - Information Centre for Life Sciences","ror":"https://ror.org/0259fwx54","country_code":"DE","type":"archive","lineage":["https://openalex.org/I4210112663"]}],"countries":["DE","GB"],"is_corresponding":true,"raw_author_name":"Juliane Fluck","raw_affiliation_strings":["University of Bonn, Germany https://ror.org/041nas322","ZB MED \u2013 Information Centre for Life Sciences https://ror.org/0259fwx54"],"raw_orcid":"https://orcid.org/0000-0003-1379-7023","affiliations":[{"raw_affiliation_string":"University of Bonn, Germany https://ror.org/041nas322","institution_ids":["https://openalex.org/I135140700"]},{"raw_affiliation_string":"ZB MED \u2013 Information Centre for Life Sciences https://ror.org/0259fwx54","institution_ids":["https://openalex.org/I2802983449","https://openalex.org/I4210112663"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5077378114"],"corresponding_institution_ids":["https://openalex.org/I135140700","https://openalex.org/I2802983449","https://openalex.org/I4210112663"],"apc_list":null,"apc_paid":null,"fwci":2.7996,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.90634469,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":97},"biblio":{"volume":"302","issue":null,"first_page":"108","last_page":"112"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7985737323760986},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.72893226146698},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.686038613319397},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5646654367446899},{"id":"https://openalex.org/keywords/semantic-interoperability","display_name":"Semantic interoperability","score":0.5494557619094849},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.5365344285964966},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.4929165840148926},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4901757836341858},{"id":"https://openalex.org/keywords/workbench","display_name":"Workbench","score":0.48658835887908936},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.18161335587501526},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09250769019126892}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7985737323760986},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.72893226146698},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.686038613319397},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5646654367446899},{"id":"https://openalex.org/C192800085","wikidata":"https://www.wikidata.org/wiki/Q5258530","display_name":"Semantic interoperability","level":3,"score":0.5494557619094849},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.5365344285964966},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.4929165840148926},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4901757836341858},{"id":"https://openalex.org/C2779145975","wikidata":"https://www.wikidata.org/wiki/Q347690","display_name":"Workbench","level":3,"score":0.48658835887908936},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.18161335587501526},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09250769019126892},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012189","descriptor_name":"Retrospective Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012189","descriptor_name":"Retrospective Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012189","descriptor_name":"Retrospective Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064878","descriptor_name":"Web Browser","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti230074","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti230074","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230074","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:37203619","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37203619","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti230074","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti230074","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI230074","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320329666","display_name":"Berlin Institute of Health","ror":"https://ror.org/0493xsw21"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4377092107.pdf"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1577231857","https://openalex.org/W2164572080","https://openalex.org/W2254472215","https://openalex.org/W2302501749","https://openalex.org/W2404810405","https://openalex.org/W2413143458","https://openalex.org/W2763682064","https://openalex.org/W2886155598","https://openalex.org/W4205194571","https://openalex.org/W4226154371","https://openalex.org/W4281661209","https://openalex.org/W6753862913"],"related_works":["https://openalex.org/W2388509490","https://openalex.org/W2109648960","https://openalex.org/W2050384624","https://openalex.org/W2166015079","https://openalex.org/W2776888796","https://openalex.org/W2388480422","https://openalex.org/W2624268110","https://openalex.org/W2396746549","https://openalex.org/W1985696255","https://openalex.org/W1509712321"],"abstract_inverted_index":{"Semantic":[0],"interoperability,":[1],"i.e.,":[2],"the":[3,8,18,29,36,39,118,128,131,156,160],"ability":[4],"to":[5,100],"automatically":[6],"interpret":[7],"shared":[9],"information":[10],"in":[11,103],"a":[12,92,96,106,135,152],"meaningful":[13],"way,":[14],"is":[15,64,76,162],"one":[16],"of":[17,25,31,38,50,68,95,108,120,159],"most":[19],"important":[20],"requirements":[21,133],"for":[22,44,134,140],"data":[23,51,60],"analysis":[24],"different":[26],"sources.":[27],"In":[28],"area":[30],"clinical":[32],"and":[33,62,111,123,155],"epidemiological":[34],"studies,":[35],"target":[37],"National":[40],"Research":[41],"Data":[42,47],"Infrastructure":[43],"Personal":[45],"Health":[46],"(NFDI4Health),":[48],"interoperability":[49],"collection":[52],"instruments":[53],"such":[54],"as":[55,78],"case":[56],"report":[57],"forms":[58],"(CRFs),":[59],"dictionaries":[61],"questionnaires":[63],"critical.":[65],"Retrospective":[66],"integration":[67],"semantic":[69,136],"codes":[70],"into":[71],"study":[72],"metadata":[73,137],"at":[74],"item-level":[75],"important,":[77],"ongoing":[79],"or":[80],"completed":[81],"studies":[82],"contain":[83],"valuable":[84],"information,":[85],"which":[86],"should":[87],"be":[88,149],"preserved.":[89],"We":[90],"present":[91],"first":[93],"version":[94],"Metadata":[97],"Annotation":[98],"Workbench":[99],"support":[101],"annotators":[102],"dealing":[104],"with":[105,115,164],"variety":[107],"complex":[109],"terminologies":[110],"ontologies.":[112],"User-driven":[113],"development":[114],"users":[116],"from":[117],"fields":[119],"nutritional":[121],"epidemiology":[122],"chronic":[124],"diseases":[125],"ensured":[126],"that":[127],"service":[129],"fulfills":[130],"basic":[132],"annotation":[138],"software":[139,161],"these":[141],"NFDI4Health":[142],"use":[143],"cases.":[144],"The":[145],"web":[146,153],"application":[147],"can":[148],"accessed":[150],"using":[151],"browser":[154],"source":[157],"code":[158],"available":[163],"an":[165],"open-source":[166],"MIT":[167],"license.":[168]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
