{"id":"https://openalex.org/W4283714710","doi":"https://doi.org/10.3233/shti220735","title":"Natural Language Processing Approaches for Retrieval of Clinically Relevant Genomic Information in Cancer","display_name":"Natural Language Processing Approaches for Retrieval of Clinically Relevant Genomic Information in Cancer","publication_year":2022,"publication_date":"2022-06-29","ids":{"openalex":"https://openalex.org/W4283714710","doi":"https://doi.org/10.3233/shti220735"},"language":"en","primary_location":{"id":"doi:10.3233/shti220735","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220735","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220735","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220735","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070026501","display_name":"Taxiarchis Botsis","orcid":"https://orcid.org/0000-0001-7848-2570"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Taxiarchis Botsis","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":null,"display_name":"the Johns Hopkins Molecular Tumor Board Investigators","orcid":null},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"the Johns Hopkins Molecular Tumor Board Investigators","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063461454","display_name":"Joseph C. Murray","orcid":"https://orcid.org/0000-0001-6159-7814"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Murray","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070111285","display_name":"Alessandro Leal","orcid":"https://orcid.org/0000-0001-7967-3213"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alessandro Leal","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038324249","display_name":"Doreen N. Palsgrove","orcid":"https://orcid.org/0000-0001-9640-2482"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Doreen Palsgrove","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100392089","display_name":"Wei Wang","orcid":"https://orcid.org/0000-0002-8180-2886"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei Wang","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048216930","display_name":"James R. White","orcid":"https://orcid.org/0000-0002-7535-9179"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James R. White","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006560755","display_name":"Victor E. Velculescu","orcid":"https://orcid.org/0000-0003-1195-438X"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Victor E. Velculescu","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056510071","display_name":"Valsamo Anagnostou","orcid":"https://orcid.org/0000-0001-9480-3047"},"institutions":[{"id":"https://openalex.org/I145311948","display_name":"Johns Hopkins University","ror":"https://ror.org/00za53h95","country_code":"US","type":"education","lineage":["https://openalex.org/I145311948"]},{"id":"https://openalex.org/I4210164401","display_name":"Sidney Kimmel Comprehensive Cancer Center","ror":"https://ror.org/05m5b8x20","country_code":"US","type":"facility","lineage":["https://openalex.org/I2799853436","https://openalex.org/I4210164401"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Valsamo Anagnostou","raw_affiliation_strings":["The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA","institution_ids":["https://openalex.org/I4210164401","https://openalex.org/I145311948"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5070026501"],"corresponding_institution_ids":["https://openalex.org/I145311948","https://openalex.org/I4210164401"],"apc_list":null,"apc_paid":null,"fwci":2.4934,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.89097354,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5983719825744629},{"id":"https://openalex.org/keywords/genomic-information","display_name":"Genomic information","score":0.5576359033584595},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.5255105495452881},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5057740211486816},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.48194360733032227},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4717710018157959},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.4480953514575958},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40840232372283936},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3852118253707886},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.37055811285972595},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32849788665771484},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3056586980819702},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.275179386138916},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.22416523098945618},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.21460124850273132},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15878430008888245},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.1579592227935791},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.12544551491737366},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08858481049537659}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5983719825744629},{"id":"https://openalex.org/C3020077223","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomic information","level":4,"score":0.5576359033584595},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.5255105495452881},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5057740211486816},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.48194360733032227},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4717710018157959},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.4480953514575958},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40840232372283936},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3852118253707886},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.37055811285972595},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32849788665771484},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3056586980819702},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.275179386138916},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.22416523098945618},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.21460124850273132},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15878430008888245},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.1579592227935791},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.12544551491737366},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08858481049537659}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.3233/shti220735","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220735","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220735","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmh:oai:pubmedcentral.nih.gov:9381043","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9381043","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Stud Health Technol Inform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.3233/shti220735","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220735","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220735","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"score":0.5899999737739563,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4283714710.pdf","grobid_xml":"https://content.openalex.org/works/W4283714710.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W2116159459","https://openalex.org/W2564383306","https://openalex.org/W2805757857","https://openalex.org/W7038201309"],"related_works":["https://openalex.org/W3082935376","https://openalex.org/W4399651953","https://openalex.org/W4386960999","https://openalex.org/W2899657781","https://openalex.org/W4322484660","https://openalex.org/W3193951088","https://openalex.org/W4388011470","https://openalex.org/W4230423494","https://openalex.org/W4403376686","https://openalex.org/W4298001029"],"abstract_inverted_index":{"The":[0],"accelerating":[1],"impact":[2],"of":[3,21,27,40,44,50,60,100,112,119],"genomic":[4,29,42,67,88,138],"data":[5],"in":[6,54,110],"clinical":[7,36],"decision-making":[8],"has":[9,96],"generated":[10],"a":[11,45,75,117,126],"paradigm":[12],"shift":[13],"from":[14,69,90],"treatment":[15,132],"based":[16,133],"on":[17,134],"the":[18,22,25,35,41,51,58,98],"anatomic":[19],"origin":[20],"tumor":[23],"to":[24,31,80,129],"incorporation":[26],"key":[28],"features":[30],"guide":[32],"therapy.":[33],"Assessing":[34],"validity":[37],"and":[38,82,87,104],"utility":[39],"background":[43],"patient\u2019s":[46],"cancer":[47,84],"represents":[48],"one":[49],"emerging":[52],"challenges":[53],"oncology":[55],"practice,":[56],"demanding":[57],"development":[59],"automated":[61],"platforms":[62],"for":[63],"extracting":[64],"clinically":[65],"relevant":[66],"information":[68,89],"medical":[70],"texts.":[71],"We":[72],"developed":[73],"PubMiner,":[74],"natural":[76],"language":[77],"processing":[78],"tool":[79],"extract":[81],"interpret":[83],"type,":[85],"therapy,":[86],"biomedical":[91],"abstracts.":[92],"Our":[93,121],"initial":[94],"focus":[95],"been":[97],"retrieval":[99],"gene":[101],"names,":[102],"variants,":[103],"negations,":[105],"where":[106],"PubMiner":[107],"performed":[108],"highly":[109],"terms":[111],"total":[113],"recall":[114],"(91.7%)":[115],"with":[116],"precision":[118],"79.7%.":[120],"next":[122],"steps":[123],"include":[124],"developing":[125],"web-based":[127],"interface":[128],"promote":[130],"personalized":[131],"each":[135],"tumor\u2019s":[136],"unique":[137],"fingerprints.":[139]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
