{"id":"https://openalex.org/W4283736397","doi":"https://doi.org/10.3233/shti220730","title":"Adaptation of HL7 FHIR for the Exchange of Patients\u2019 Gene Expression Profiles","display_name":"Adaptation of HL7 FHIR for the Exchange of Patients\u2019 Gene Expression Profiles","publication_year":2022,"publication_date":"2022-06-29","ids":{"openalex":"https://openalex.org/W4283736397","doi":"https://doi.org/10.3233/shti220730","pmid":"https://pubmed.ncbi.nlm.nih.gov/35773876"},"language":"en","primary_location":{"id":"doi:10.3233/shti220730","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220730","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220730","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220730","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075084280","display_name":"Florian Auer","orcid":"https://orcid.org/0000-0002-5320-8900"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Florian Auer","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029030657","display_name":"Zhibek Abdykalykova","orcid":"https://orcid.org/0000-0002-8017-5913"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Zhibek Abdykalykova","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036358389","display_name":"Dominik M\u00fcller","orcid":"https://orcid.org/0000-0003-0838-9885"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dominik M\u00fcller","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010964383","display_name":"Frank Kr\u00e4mer","orcid":"https://orcid.org/0000-0002-2857-7122"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Frank Kramer","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5075084280"],"corresponding_institution_ids":["https://openalex.org/I179225836"],"apc_list":null,"apc_paid":null,"fwci":0.9788,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.71667108,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"295","issue":null,"first_page":"332","last_page":"335"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9829999804496765,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9537000060081482,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adaptation","display_name":"Adaptation (eye)","score":0.6289446353912354},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5429428219795227},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.459085613489151},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39896202087402344},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.27929261326789856},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15587648749351501},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.0950818657875061},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0880504846572876}],"concepts":[{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.6289446353912354},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5429428219795227},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.459085613489151},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39896202087402344},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.27929261326789856},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15587648749351501},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.0950818657875061},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0880504846572876},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057208","descriptor_name":"Health Level Seven","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057208","descriptor_name":"Health Level Seven","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057208","descriptor_name":"Health Level Seven","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.3233/shti220730","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220730","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220730","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:35773876","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35773876","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null},{"id":"pmh:oai:uni-augsburg.opus-bayern.de:97323","is_oa":true,"landing_page_url":"https://opus.bibliothek.uni-augsburg.de/opus4/frontdoor/index/index/docId/97323","pdf_url":null,"source":{"id":"https://openalex.org/S4306400930","display_name":"OPUS (Augsburg University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I119916105","host_organization_name":"Augsburg University","host_organization_lineage":["https://openalex.org/I119916105"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"doc-type:bookpart"}],"best_oa_location":{"id":"doi:10.3233/shti220730","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220730","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220730","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.550000011920929}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4283736397.pdf","grobid_xml":"https://content.openalex.org/works/W4283736397.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W2084975981","https://openalex.org/W2116858301","https://openalex.org/W2154109625","https://openalex.org/W2164572080","https://openalex.org/W2626036098","https://openalex.org/W2751687090","https://openalex.org/W2764573087"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655","https://openalex.org/W2053972265"],"abstract_inverted_index":{"High-throughput":[0],"technologies,":[1],"especially":[2],"gene":[3,88],"expression":[4,70,89],"analyses":[5],"can":[6,115],"accurately":[7],"capture":[8,40],"the":[9,66,105,124,129],"molecular":[10,67],"state":[11],"in":[12,20,65,118,136],"patients":[13,96],"under":[14],"different":[15],"conditions.":[16],"Thus,":[17],"their":[18],"application":[19],"clinical":[21,44,119],"routine":[22],"gains":[23],"increasing":[24],"relevance":[25],"and":[26,46,53,121,131],"fosters":[27],"patient":[28],"stratification":[29],"towards":[30],"individualized":[31],"treatment":[32],"decisions.":[33],"Electronic":[34],"health":[35],"records":[36],"already":[37],"evolved":[38],"to":[39,63],"genomic":[41],"data":[42,135],"within":[43],"systems":[45,120],"standards":[47],"like":[48],"FHIR":[49,58,106,113],"enable":[50],"sharing":[51],"within,":[52],"even":[54],"between":[55],"institutions.":[56],"However,":[57],"only":[59],"provides":[60],"profiles":[61,90],"tailored":[62],"variations":[64],"sequence,":[68],"while":[69],"patterns":[71],"are":[72],"neglected":[73],"although":[74],"being":[75],"equally":[76],"important":[77],"for":[78,126,128],"decision":[79],"making.":[80],"Here":[81],"we":[82],"provide":[83],"an":[84,102],"exemplary":[85],"implementation":[86],"of":[87,91,95,104,133],"a":[92],"microarray":[93],"analysis":[94],"with":[97],"acute":[98],"myeloid":[99],"leukemia":[100],"using":[101],"adaptation":[103],"genomics":[107],"extension.":[108],"Our":[109],"results":[110],"demonstrate":[111],"how":[112],"resources":[114],"be":[116],"facilitated":[117],"thereby":[122],"pave":[123],"way":[125],"usage":[127],"aggregation":[130],"exchange":[132],"transcriptomic":[134],"multi-center":[137],"studies.":[138]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
