{"id":"https://openalex.org/W4281564823","doi":"https://doi.org/10.3233/shti220391","title":"MISeval: A Metric Library for Medical Image Segmentation Evaluation","display_name":"MISeval: A Metric Library for Medical Image Segmentation Evaluation","publication_year":2022,"publication_date":"2022-05-25","ids":{"openalex":"https://openalex.org/W4281564823","doi":"https://doi.org/10.3233/shti220391","pmid":"https://pubmed.ncbi.nlm.nih.gov/35612011"},"language":"en","primary_location":{"id":"doi:10.3233/shti220391","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220391","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220391","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220391","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036358389","display_name":"Dominik M\u00fcller","orcid":"https://orcid.org/0000-0003-0838-9885"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]},{"id":"https://openalex.org/I2802007660","display_name":"University Hospital Augsburg","ror":"https://ror.org/03b0k9c14","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802007660"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Dominik M\u00fcller","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","Medical Data Integration Center, Institute for Digital Medicine, University Hospital Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]},{"raw_affiliation_string":"Medical Data Integration Center, Institute for Digital Medicine, University Hospital Augsburg, Germany","institution_ids":["https://openalex.org/I2802007660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029272027","display_name":"Dennis Hartmann","orcid":"https://orcid.org/0000-0002-8751-2505"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dennis Hartmann","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031216931","display_name":"Philip Meyer","orcid":"https://orcid.org/0000-0003-0651-5569"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]},{"id":"https://openalex.org/I2802007660","display_name":"University Hospital Augsburg","ror":"https://ror.org/03b0k9c14","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802007660"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philip Meyer","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","Medical Data Integration Center, Institute for Digital Medicine, University Hospital Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]},{"raw_affiliation_string":"Medical Data Integration Center, Institute for Digital Medicine, University Hospital Augsburg, Germany","institution_ids":["https://openalex.org/I2802007660"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075084280","display_name":"Florian Auer","orcid":"https://orcid.org/0000-0002-5320-8900"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Florian Auer","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045634598","display_name":"I\u00f1aki Soto\u2010Rey","orcid":"https://orcid.org/0000-0003-3061-5818"},"institutions":[{"id":"https://openalex.org/I2802007660","display_name":"University Hospital Augsburg","ror":"https://ror.org/03b0k9c14","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2802007660"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"I\u00f1aki Soto-Rey","raw_affiliation_strings":["Medical Data Integration Center, Institute for Digital Medicine, University Hospital Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"Medical Data Integration Center, Institute for Digital Medicine, University Hospital Augsburg, Germany","institution_ids":["https://openalex.org/I2802007660"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010964383","display_name":"Frank Kr\u00e4mer","orcid":"https://orcid.org/0000-0002-2857-7122"},"institutions":[{"id":"https://openalex.org/I179225836","display_name":"University of Augsburg","ror":"https://ror.org/03p14d497","country_code":"DE","type":"education","lineage":["https://openalex.org/I179225836"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Frank Kramer","raw_affiliation_strings":["IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany"],"affiliations":[{"raw_affiliation_string":"IT-Infrastructure for Translational Medical Research, University of Augsburg, Germany","institution_ids":["https://openalex.org/I179225836"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5036358389"],"corresponding_institution_ids":["https://openalex.org/I179225836","https://openalex.org/I2802007660"],"apc_list":null,"apc_paid":null,"fwci":9.4921,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.98264947,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":99},"biblio":{"volume":"294","issue":null,"first_page":"33","last_page":"37"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.8876019716262817},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8037887811660767},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7092907428741455},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.6448665857315063},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.5035662055015564},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4484623670578003},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4344748854637146},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4125230014324188},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.33495497703552246},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.15596184134483337}],"concepts":[{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.8876019716262817},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8037887811660767},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7092907428741455},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.6448665857315063},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.5035662055015564},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4484623670578003},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4344748854637146},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4125230014324188},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.33495497703552246},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.15596184134483337},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.3233/shti220391","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220391","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220391","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:35612011","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35612011","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null},{"id":"pmh:oai:uni-augsburg.opus-bayern.de:96107","is_oa":true,"landing_page_url":"https://opus.bibliothek.uni-augsburg.de/opus4/frontdoor/index/index/docId/96107","pdf_url":null,"source":{"id":"https://openalex.org/S4306400930","display_name":"OPUS (Augsburg University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I119916105","host_organization_name":"Augsburg University","host_organization_lineage":["https://openalex.org/I119916105"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"doc-type:bookpart"}],"best_oa_location":{"id":"doi:10.3233/shti220391","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti220391","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI220391","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4281564823.pdf","grobid_xml":"https://content.openalex.org/works/W4281564823.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1909740415","https://openalex.org/W2101234009","https://openalex.org/W2592929672","https://openalex.org/W2978457402","https://openalex.org/W3093606981","https://openalex.org/W3125055358","https://openalex.org/W3208176997","https://openalex.org/W4210984894","https://openalex.org/W4251651498","https://openalex.org/W6675354045","https://openalex.org/W6734494589"],"related_works":["https://openalex.org/W2341492732","https://openalex.org/W3187193180","https://openalex.org/W106542691","https://openalex.org/W4287027380","https://openalex.org/W1699080303","https://openalex.org/W4297799326","https://openalex.org/W3116064965","https://openalex.org/W2557718140","https://openalex.org/W67092138","https://openalex.org/W4225687299"],"abstract_inverted_index":{"Correct":[0],"performance":[1,64],"assessment":[2,65],"is":[3,22,79],"crucial":[4],"for":[5,29,47],"evaluating":[6],"modern":[7,70],"artificial":[8],"intelligence":[9],"algorithms":[10],"in":[11,27],"medicine":[12],"like":[13],"deep-learning":[14],"based":[15],"medical":[16],"image":[17],"segmentation":[18],"models.":[19],"However,":[20],"there":[21],"no":[23],"universal":[24],"metric":[25,45],"library":[26,46],"Python":[28,41],"standardized":[30],"and":[31,59,76,84],"reproducible":[32],"evaluation.":[33],"Thus,":[34],"we":[35],"propose":[36],"our":[37],"open-source":[38],"publicly":[39],"available":[40,80],"package":[42,68],"MISeval:":[43],"a":[44],"Medical":[48],"Image":[49],"Segmentation":[50],"Evaluation.":[51],"The":[52,67],"implemented":[53],"metrics":[54],"can":[55],"be":[56],"intuitively":[57],"used":[58],"easily":[60],"integrated":[61],"into":[62],"any":[63],"pipeline.":[66],"utilizes":[69],"DevOps":[71],"strategies":[72],"to":[73],"ensure":[74],"functionality":[75],"stability.":[77],"MISeval":[78],"from":[81],"PyPI":[82],"(miseval)":[83],"GitHub:":[85],"https://github.com/frankkramer-lab/miseval.":[86]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
