{"id":"https://openalex.org/W4205583566","doi":"https://doi.org/10.3233/shti210917","title":"Clinical Notes De-Identification: Scoping Recent Benchmarks for n2c2 Datasets","display_name":"Clinical Notes De-Identification: Scoping Recent Benchmarks for n2c2 Datasets","publication_year":2022,"publication_date":"2022-01-14","ids":{"openalex":"https://openalex.org/W4205583566","doi":"https://doi.org/10.3233/shti210917","pmid":"https://pubmed.ncbi.nlm.nih.gov/35062150"},"language":"en","primary_location":{"id":"doi:10.3233/shti210917","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210917","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210917","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210917","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5069577540","display_name":"Taridzo Chomutare","orcid":"https://orcid.org/0000-0003-3603-175X"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Taridzo Chomutare","raw_affiliation_strings":["Norwegian Centre for E-health Research, Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Norwegian Centre for E-health Research, Troms\u00f8, Norway","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5069577540"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.3309,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.49410336,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"289","issue":null,"first_page":"293","last_page":"296"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9907000064849854,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9431999921798706,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transparency","display_name":"Transparency (behavior)","score":0.7653599977493286},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7267131805419922},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6800026893615723},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5630640387535095},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.4704165756702423},{"id":"https://openalex.org/keywords/health-records","display_name":"Health records","score":0.42798566818237305},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.365885853767395},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3534321188926697},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.09208160638809204},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.07145613431930542}],"concepts":[{"id":"https://openalex.org/C2780233690","wikidata":"https://www.wikidata.org/wiki/Q535347","display_name":"Transparency (behavior)","level":2,"score":0.7653599977493286},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7267131805419922},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6800026893615723},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5630640387535095},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.4704165756702423},{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.42798566818237305},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.365885853767395},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3534321188926697},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.09208160638809204},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.07145613431930542},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti210917","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210917","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210917","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:35062150","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35062150","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti210917","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210917","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210917","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"display_name":"Gender equality","score":0.49000000953674316,"id":"https://metadata.un.org/sdg/5"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320324181","display_name":"Helse Nord RHF","ror":"https://ror.org/05f6c0c45"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4205583566.pdf","grobid_xml":"https://content.openalex.org/works/W4205583566.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W2190333735","https://openalex.org/W2621075239","https://openalex.org/W2791930518","https://openalex.org/W2896457183","https://openalex.org/W2963956191","https://openalex.org/W3027647720","https://openalex.org/W3095788424","https://openalex.org/W3116387758","https://openalex.org/W3158708644","https://openalex.org/W3206356080","https://openalex.org/W3209006175","https://openalex.org/W6601055026","https://openalex.org/W6702248584"],"related_works":["https://openalex.org/W4382930947","https://openalex.org/W3152382318","https://openalex.org/W3004686567","https://openalex.org/W2738656338","https://openalex.org/W2603787370","https://openalex.org/W2555400967","https://openalex.org/W3214759741","https://openalex.org/W3081288631","https://openalex.org/W3174876210","https://openalex.org/W3126697728"],"abstract_inverted_index":{"Publicly":[0],"shared":[1],"repositories":[2],"play":[3],"an":[4],"important":[5,16],"role":[6],"in":[7,18,25,50],"advancing":[8],"performance":[9],"benchmarks":[10,32],"for":[11,66],"some":[12],"of":[13,53],"the":[14,35,48,60],"most":[15,30],"tasks":[17],"natural":[19],"language":[20],"processing":[21],"(NLP)":[22],"and":[23,44,69],"healthcare":[24],"general.":[26],"This":[27],"study":[28],"reviews":[29],"recent":[31],"based":[33],"on":[34],"2014":[36],"n2c2":[37],"de-identification":[38],"dataset.":[39],"Pre-processing":[40],"challenges":[41],"were":[42],"uncovered,":[43],"attention":[45],"brought":[46],"to":[47],"discrepancies":[49],"reported":[51],"number":[52],"Protected":[54],"Health":[55],"Information":[56],"(PHI)":[57],"entities":[58],"among":[59],"studies.":[61],"Improved":[62],"reporting":[63],"is":[64],"required":[65],"greater":[67],"transparency":[68],"reproducibility.":[70]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
