{"id":"https://openalex.org/W4205703670","doi":"https://doi.org/10.3233/shti210861","title":"Semiautomatic Identification of Pulmonary Embolism in Electronic Health Records Through Sentence Labeling","display_name":"Semiautomatic Identification of Pulmonary Embolism in Electronic Health Records Through Sentence Labeling","publication_year":2022,"publication_date":"2022-01-14","ids":{"openalex":"https://openalex.org/W4205703670","doi":"https://doi.org/10.3233/shti210861","pmid":"https://pubmed.ncbi.nlm.nih.gov/35062094"},"language":"en","primary_location":{"id":"doi:10.3233/shti210861","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210861","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210861","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210861","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Gleb Danilov","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Gleb Danilov","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Timur Ishankulov","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Timur Ishankulov","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Alexandra Kosyrkova","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Alexandra Kosyrkova","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Maria Shults","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Maria Shults","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Semen Melchenko","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Semen Melchenko","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Tatyana Tsukanova","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Tatyana Tsukanova","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Michael Shifrin","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Michael Shifrin","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]},{"author_position":"last","author":{"id":null,"display_name":"Alexander Potapov","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122729","display_name":"Burdenko Neurosurgery Institute","ror":"https://ror.org/02t1t6n83","country_code":"RU","type":"healthcare","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210110862","https://openalex.org/I4210122729"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Alexander Potapov","raw_affiliation_strings":["Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation"],"affiliations":[{"raw_affiliation_string":"Laboratory of Biomedical Informatics and Artificial Intelligence, National Medical Research Center for Neurosurgery named after N.N. Burdenko, Moscow, Russian Federation","institution_ids":["https://openalex.org/I4210122729"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210122729"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.01021645,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"289","issue":null,"first_page":"69","last_page":"72"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.29249998927116394,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.29249998927116394,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.061799999326467514,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11396","display_name":"Artificial Intelligence in Healthcare","score":0.05860000103712082,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.666100025177002},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6359000205993652},{"id":"https://openalex.org/keywords/pulmonary-embolism","display_name":"Pulmonary embolism","score":0.574400007724762},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.5658000111579895},{"id":"https://openalex.org/keywords/health-records","display_name":"Health records","score":0.5321000218391418},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.4729999899864197},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.38609999418258667}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6901999711990356},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.666100025177002},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6359000205993652},{"id":"https://openalex.org/C2776265017","wikidata":"https://www.wikidata.org/wiki/Q220570","display_name":"Pulmonary embolism","level":2,"score":0.574400007724762},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.5658000111579895},{"id":"https://openalex.org/C3019952477","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Health records","level":3,"score":0.5321000218391418},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48980000615119934},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.4729999899864197},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.42579999566078186},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.38609999418258667},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.35249999165534973},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34200000762939453},{"id":"https://openalex.org/C2982795734","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health information","level":3,"score":0.3411000072956085},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.32019999623298645},{"id":"https://openalex.org/C545542383","wikidata":"https://www.wikidata.org/wiki/Q2751242","display_name":"Medical emergency","level":1,"score":0.3183000087738037},{"id":"https://openalex.org/C133652896","wikidata":"https://www.wikidata.org/wiki/Q7251300","display_name":"Protected health information","level":5,"score":0.3041999936103821},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.28690001368522644},{"id":"https://openalex.org/C28490314","wikidata":"https://www.wikidata.org/wiki/Q189436","display_name":"Speech recognition","level":1,"score":0.2662999927997589},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.257999986410141},{"id":"https://openalex.org/C3019150057","wikidata":"https://www.wikidata.org/wiki/Q92779279","display_name":"Medical information","level":2,"score":0.2565000057220459},{"id":"https://openalex.org/C24756922","wikidata":"https://www.wikidata.org/wiki/Q1757694","display_name":"Data quality","level":3,"score":0.2524000108242035}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011655","descriptor_name":"Pulmonary Embolism","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D011655","descriptor_name":"Pulmonary Embolism","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D011655","descriptor_name":"Pulmonary Embolism","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti210861","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210861","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210861","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:35062094","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35062094","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti210861","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210861","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210861","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4205703670.pdf","grobid_xml":"https://content.openalex.org/works/W4205703670.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W2775486588","https://openalex.org/W2794237618","https://openalex.org/W2807320350","https://openalex.org/W2990724214","https://openalex.org/W3013605954","https://openalex.org/W3015443789","https://openalex.org/W3040684673","https://openalex.org/W3164499433"],"related_works":[],"abstract_inverted_index":{"In":[0],"this":[1],"study,":[2],"we":[3],"tested":[4],"the":[5,8,36,52,57,73,84],"quality":[6,76],"of":[7,54,59,77,87],"information":[9,53,78],"extraction":[10,79],"algorithm":[11],"proposed":[12],"by":[13,80],"our":[14,46],"group":[15],"to":[16,35,50,64,72],"detect":[17],"pulmonary":[18],"embolism":[19],"(PE)":[20],"in":[21],"medical":[22],"cases":[23],"through":[24],"sentence":[25],"labeling.":[26],"Having":[27],"shown":[28],"a":[29],"comparable":[30],"result":[31],"(F1":[32],"=":[33,44],"0.921)":[34],"best":[37],"machine":[38],"learning":[39],"method":[40],"(random":[41],"forest,":[42],"F1":[43],"0.937),":[45],"approach":[47],"proved":[48],"not":[49],"miss":[51],"interest.":[55],"Scoping":[56],"number":[58],"texts":[60],"under":[61],"review":[62],"down":[63],"distinct":[65],"sentences":[66],"and":[67,75,82],"introducing":[68],"labeling":[69,88],"rules":[70],"contributes":[71],"efficiency":[74],"experts":[81],"makes":[83],"challenging":[85],"tasks":[86],"large":[89],"textual":[90],"datasets":[91],"solvable.":[92]},"counts_by_year":[],"updated_date":"2026-03-07T16:01:11.037858","created_date":"2022-01-25T00:00:00"}
