{"id":"https://openalex.org/W3209594665","doi":"https://doi.org/10.3233/shti210590","title":"Understanding the Gap Between Information Models and Realism-Based Ontologies Using the Generic Component Model","display_name":"Understanding the Gap Between Information Models and Realism-Based Ontologies Using the Generic Component Model","publication_year":2021,"publication_date":"2021-10-27","ids":{"openalex":"https://openalex.org/W3209594665","doi":"https://doi.org/10.3233/shti210590","mag":"3209594665","pmid":"https://pubmed.ncbi.nlm.nih.gov/34734868"},"language":"en","primary_location":{"id":"doi:10.3233/shti210590","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210590","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210590","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210590","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047229883","display_name":"Mathias Brochhausen","orcid":"https://orcid.org/0000-0003-1834-3856"},"institutions":[{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mathias Brochhausen","raw_affiliation_strings":["Dept. of Biomedical Informatics, University of Arkansas for Medical Sciences, USA","Dept. of Biomedical Informatics, University of Arkansas for Medical Sciences a , USA"],"affiliations":[{"raw_affiliation_string":"Dept. of Biomedical Informatics, University of Arkansas for Medical Sciences, USA","institution_ids":["https://openalex.org/I79620101"]},{"raw_affiliation_string":"Dept. of Biomedical Informatics, University of Arkansas for Medical Sciences a , USA","institution_ids":["https://openalex.org/I79620101"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079437361","display_name":"Sarah Bost","orcid":"https://orcid.org/0000-0001-8553-9539"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarah J. Bost","raw_affiliation_strings":["Dept. of Health Outcomes and Biomedical Informatics, University of Florida, USA"],"affiliations":[{"raw_affiliation_string":"Dept. of Health Outcomes and Biomedical Informatics, University of Florida, USA","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059450527","display_name":"Nitya Singh","orcid":"https://orcid.org/0000-0003-1090-3046"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nitya Singh","raw_affiliation_strings":["Emerging Pathogens Institute & Dept. of Animal Sciences, University of Florida, USA"],"affiliations":[{"raw_affiliation_string":"Emerging Pathogens Institute & Dept. of Animal Sciences, University of Florida, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033363764","display_name":"Christoph Brochhausen","orcid":"https://orcid.org/0000-0002-6761-0247"},"institutions":[{"id":"https://openalex.org/I3129555431","display_name":"University Hospital Regensburg","ror":"https://ror.org/01226dv09","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I3129555431"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christoph Brochhausen","raw_affiliation_strings":["Institute of Pathology & Central Biobank, University and University Clinic of Regensburg, Regensburg, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Pathology & Central Biobank, University and University Clinic of Regensburg, Regensburg, Germany","institution_ids":["https://openalex.org/I3129555431"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109813612","display_name":"Bernd Blobel","orcid":null},"institutions":[{"id":"https://openalex.org/I21250087","display_name":"Charles University","ror":"https://ror.org/024d6js02","country_code":"CZ","type":"education","lineage":["https://openalex.org/I21250087"]},{"id":"https://openalex.org/I83041830","display_name":"Deggendorf Institute of Technology","ror":"https://ror.org/02kw5st29","country_code":"DE","type":"education","lineage":["https://openalex.org/I83041830"]},{"id":"https://openalex.org/I60668342","display_name":"University of Regensburg","ror":"https://ror.org/01eezs655","country_code":"DE","type":"education","lineage":["https://openalex.org/I60668342"]}],"countries":["CZ","DE"],"is_corresponding":false,"raw_author_name":"Bernd Blobel","raw_affiliation_strings":["First Medical Faculty, Charles University of Prague, Czech Republic","Medical Faculty, University of Regensburg, Germany","eHealth Competence Center Bavaria, Deggendorf Institute of Technology, Germany"],"affiliations":[{"raw_affiliation_string":"First Medical Faculty, Charles University of Prague, Czech Republic","institution_ids":["https://openalex.org/I21250087"]},{"raw_affiliation_string":"Medical Faculty, University of Regensburg, Germany","institution_ids":["https://openalex.org/I60668342"]},{"raw_affiliation_string":"eHealth Competence Center Bavaria, Deggendorf Institute of Technology, Germany","institution_ids":["https://openalex.org/I83041830"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5047229883"],"corresponding_institution_ids":["https://openalex.org/I79620101"],"apc_list":null,"apc_paid":null,"fwci":4.2309,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.95500369,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"285","issue":null,"first_page":"159","last_page":"164"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7836479544639587},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.7385390996932983},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7292477488517761},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6146230697631836},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.5779811143875122},{"id":"https://openalex.org/keywords/knowledge-representation-and-reasoning","display_name":"Knowledge representation and reasoning","score":0.5042115449905396},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4288523197174072},{"id":"https://openalex.org/keywords/data-model","display_name":"Data model (GIS)","score":0.4269405007362366},{"id":"https://openalex.org/keywords/data-modeling","display_name":"Data modeling","score":0.4268740117549896},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.353085458278656},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.34567731618881226},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22513332962989807},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.10208290815353394}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7836479544639587},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.7385390996932983},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7292477488517761},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6146230697631836},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.5779811143875122},{"id":"https://openalex.org/C161301231","wikidata":"https://www.wikidata.org/wiki/Q3478658","display_name":"Knowledge representation and reasoning","level":2,"score":0.5042115449905396},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4288523197174072},{"id":"https://openalex.org/C100463513","wikidata":"https://www.wikidata.org/wiki/Q5227322","display_name":"Data model (GIS)","level":2,"score":0.4269405007362366},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.4268740117549896},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.353085458278656},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.34567731618881226},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22513332962989807},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.10208290815353394},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000079803","descriptor_name":"Data Management","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.3233/shti210590","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210590","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210590","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:34734868","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34734868","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null},{"id":"pmh:oai:epub.uni-regensburg.de:51732","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401229","display_name":"University of Regensburg Publication Server (University of Regensburg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I60668342","host_organization_name":"University of Regensburg","host_organization_lineage":["https://openalex.org/I60668342"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"doi:10.3233/shti210590","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210590","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210590","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3209594665.pdf","grobid_xml":"https://content.openalex.org/works/W3209594665.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W880330","https://openalex.org/W206034131","https://openalex.org/W220935706","https://openalex.org/W1501546233","https://openalex.org/W1628054318","https://openalex.org/W1782193986","https://openalex.org/W2107283318","https://openalex.org/W2567583209","https://openalex.org/W2810693252","https://openalex.org/W3093799062","https://openalex.org/W4205799293","https://openalex.org/W4232227427","https://openalex.org/W4241771979","https://openalex.org/W4243053196","https://openalex.org/W4246344483","https://openalex.org/W4253230548","https://openalex.org/W6825024101"],"related_works":["https://openalex.org/W2045726866","https://openalex.org/W2354320020","https://openalex.org/W2057110953","https://openalex.org/W1998044538","https://openalex.org/W2383608270","https://openalex.org/W2362290039","https://openalex.org/W2360059431","https://openalex.org/W638142098","https://openalex.org/W1572743122","https://openalex.org/W2270229215"],"abstract_inverted_index":{"The":[0],"wide-spread":[1],"use":[2],"of":[3,22,34,107],"Common":[4,40],"Data":[5,41],"Models":[6],"and":[7,53,104],"information":[8],"models":[9,17],"in":[10,37,91],"biomedical":[11],"informatics":[12],"encourages":[13],"assumptions":[14],"that":[15,94],"those":[16],"could":[18],"provide":[19],"the":[20,32,80,87,102,108,112],"entirety":[21],"what":[23],"is":[24],"needed":[25],"for":[26,97],"knowledge":[27,50,105],"representation":[28,51,106],"purposes.":[29],"Based":[30],"on":[31],"lack":[33],"computable":[35],"semantics":[36],"frequently":[38],"used":[39],"Models,":[42],"there":[43],"appears":[44],"to":[45,71,85],"be":[46],"a":[47,64,92],"gap":[48],"between":[49],"requirements":[52],"these":[54],"models.":[55],"In":[56],"this":[57,74],"use-case":[58],"oriented":[59],"approach,":[60],"we":[61],"explore":[62],"how":[63,78],"system-theoretic,":[65],"architecture-centric,":[66],"ontology-based":[67],"methodology":[68],"can":[69],"help":[70],"better":[72],"understand":[73],"gap.":[75],"We":[76],"show":[77],"using":[79],"Generic":[81],"Component":[82],"Model":[83],"helps":[84],"analyze":[86],"data":[88,98],"management":[89,99],"system":[90,103],"way":[93],"allows":[95],"accounting":[96],"procedures":[100],"inside":[101],"real":[109],"world":[110],"at":[111],"same":[113],"time.":[114]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}