{"id":"https://openalex.org/W3165363933","doi":"https://doi.org/10.3233/shti210055","title":"openEHR Mapper \u2013 A Tool to Fuse Clinical and Genomic Data Using the openEHR Standard","display_name":"openEHR Mapper \u2013 A Tool to Fuse Clinical and Genomic Data Using the openEHR Standard","publication_year":2021,"publication_date":"2021-05-24","ids":{"openalex":"https://openalex.org/W3165363933","doi":"https://doi.org/10.3233/shti210055","mag":"3165363933","pmid":"https://pubmed.ncbi.nlm.nih.gov/34042880"},"language":"en","primary_location":{"id":"doi:10.3233/shti210055","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210055","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210055","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210055","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077283446","display_name":"Niklas Reimer","orcid":"https://orcid.org/0000-0002-0491-3929"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Niklas Reimer","raw_affiliation_strings":["Institute of Medical Informatics, University of L\u00fcbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Informatics, University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002813701","display_name":"Hannes Ulrich","orcid":"https://orcid.org/0000-0002-8349-6798"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hannes Ulrich","raw_affiliation_strings":["IT Center for Clinical Research (ITCR-L), University of L\u00fcbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IT Center for Clinical Research (ITCR-L), University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086749090","display_name":"Hauke Busch","orcid":"https://orcid.org/0000-0003-4763-4521"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hauke Busch","raw_affiliation_strings":["Institute for Experimental Dermatology, University of L\u00fcbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Experimental Dermatology, University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047911926","display_name":"Ann-Kristin Kock-Schoppenhauer","orcid":"https://orcid.org/0000-0001-6685-4429"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ann-Kristin Kock-Schoppenhauer","raw_affiliation_strings":["IT Center for Clinical Research (ITCR-L), University of L\u00fcbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IT Center for Clinical Research (ITCR-L), University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074605677","display_name":"Josef Ingenerf","orcid":"https://orcid.org/0000-0002-3274-8422"},"institutions":[{"id":"https://openalex.org/I9341345","display_name":"University of L\u00fcbeck","ror":"https://ror.org/00t3r8h32","country_code":"DE","type":"education","lineage":["https://openalex.org/I9341345"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Josef Ingenerf","raw_affiliation_strings":["IT Center for Clinical Research (ITCR-L), University of L\u00fcbeck, Germany","Institute of Medical Informatics, University of L\u00fcbeck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IT Center for Clinical Research (ITCR-L), University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]},{"raw_affiliation_string":"Institute of Medical Informatics, University of L\u00fcbeck, Germany","institution_ids":["https://openalex.org/I9341345"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5077283446"],"corresponding_institution_ids":["https://openalex.org/I9341345"],"apc_list":null,"apc_paid":null,"fwci":1.5799,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.85005903,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"278","issue":null,"first_page":"86","last_page":"93"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9866999983787537,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9789000153541565,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6067981719970703},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.5321857929229736},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.4814731180667877},{"id":"https://openalex.org/keywords/json","display_name":"JSON","score":0.41855210065841675},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.33683663606643677},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2541572153568268}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6067981719970703},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.5321857929229736},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.4814731180667877},{"id":"https://openalex.org/C2780416260","wikidata":"https://www.wikidata.org/wiki/Q2063","display_name":"JSON","level":2,"score":0.41855210065841675},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.33683663606643677},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2541572153568268}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/shti210055","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210055","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210055","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:34042880","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34042880","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":{"id":"doi:10.3233/shti210055","is_oa":true,"landing_page_url":"https://doi.org/10.3233/shti210055","pdf_url":"https://ebooks.iospress.nl/pdf/doi/10.3233/SHTI210055","source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.4399999976158142}],"awards":[{"id":"https://openalex.org/G3590280981","display_name":null,"funder_award_id":"01ZZ1802Z","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3165363933.pdf","grobid_xml":"https://content.openalex.org/works/W3165363933.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W2114843025","https://openalex.org/W2149441684","https://openalex.org/W2152745352","https://openalex.org/W2411835530","https://openalex.org/W2798976827","https://openalex.org/W2883427794","https://openalex.org/W2902328511","https://openalex.org/W2934493193","https://openalex.org/W2952480464","https://openalex.org/W3018468913"],"related_works":["https://openalex.org/W2385158182","https://openalex.org/W3007769775","https://openalex.org/W2577820972","https://openalex.org/W2380368790","https://openalex.org/W2367643486","https://openalex.org/W1795059188","https://openalex.org/W2391941239","https://openalex.org/W2354762837","https://openalex.org/W197262582","https://openalex.org/W2765107963"],"abstract_inverted_index":{"Precision":[0],"medicine":[1],"is":[2,86,97,109],"an":[3,66,81],"emerging":[4],"and":[5,19,53,93,142,156,161],"important":[6],"field":[7],"for":[8,32,104,111,116],"health":[9],"care.":[10],"Molecular":[11],"tumor":[12,25,118],"boards":[13],"use":[14,75,112],"a":[15,60,89,101,127],"combination":[16],"of":[17,38],"clinical":[18,46,114],"molecular":[20,94,117],"data,":[21,135],"such":[22],"as":[23,158,165,167],"somatic":[24],"mutations":[26],"to":[27,56,70,79,131,147,169],"decide":[28],"on":[29],"personalized":[30],"therapies":[31],"patients":[33],"who":[34],"have":[35],"run":[36],"out":[37],"standard":[39,78],"treatment":[40,43],"options.":[41],"Personalized":[42],"decisions":[44],"require":[45],"data":[47,55,68,83,96,121,146],"from":[48],"the":[49,76,139,145,151,170],"hospital":[50],"information":[51],"system":[52],"mutation":[54],"be":[57],"accessible":[58],"in":[59,88,113],"structured":[61],"way.":[62],"Here":[63],"we":[64,123],"introduce":[65],"open":[67],"platform":[69],"meet":[71],"these":[72],"requirements.":[73],"We":[74,149],"openEHR":[77,125,140,171],"create":[80],"expert-curated":[82],"model":[84],"that":[85,108,129],"stored":[87],"vendor-neutral":[90],"format.":[91],"Clinical":[92],"patient":[95],"integrated":[98],"into":[99],"cBioPortal,":[100],"warehousing":[102],"solution":[103],"cancer":[105],"genomic":[106],"studies":[107],"extended":[110],"routine":[115],"boards.":[119],"For":[120],"integration,":[122],"developed":[124],"Mapper,":[126],"tool":[128],"allows":[130],"(i)":[132],"process":[133],"input":[134],"(ii)":[136],"communicate":[137],"with":[138],"repository,":[141],"(iii)":[143],"export":[144],"cBioPortal.":[148],"benchmarked":[150],"mapper":[152],"performance":[153],"using":[154],"XML":[155],"JSON":[157],"serialization":[159],"format":[160],"added":[162],"caching":[163],"capabilities":[164],"well":[166],"multi-threading":[168],"Mapper.":[172]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}