{"id":"https://openalex.org/W3097973622","doi":"https://doi.org/10.3233/jifs-201466","title":"Segmentation of overlapping chromosome images using U-Net with improved dilated convolutions","display_name":"Segmentation of overlapping chromosome images using U-Net with improved dilated convolutions","publication_year":2020,"publication_date":"2020-11-06","ids":{"openalex":"https://openalex.org/W3097973622","doi":"https://doi.org/10.3233/jifs-201466","mag":"3097973622"},"language":"en","primary_location":{"id":"doi:10.3233/jifs-201466","is_oa":false,"landing_page_url":"https://doi.org/10.3233/jifs-201466","pdf_url":null,"source":{"id":"https://openalex.org/S179157397","display_name":"Journal of Intelligent & Fuzzy Systems","issn_l":"1064-1246","issn":["1064-1246","1875-8967"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Intelligent &amp; Fuzzy Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5014777126","display_name":"Xiaofei Sun","orcid":"https://orcid.org/0000-0003-0976-5715"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofei Sun","raw_affiliation_strings":["Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100770881","display_name":"Jianming Li","orcid":"https://orcid.org/0000-0001-5888-7351"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianming Li","raw_affiliation_strings":["Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064737609","display_name":"Jialiang Ma","orcid":"https://orcid.org/0000-0001-5071-2004"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jialiang Ma","raw_affiliation_strings":["Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056034911","display_name":"Huiqing Xu","orcid":"https://orcid.org/0000-0002-7413-519X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huiqing Xu","raw_affiliation_strings":["Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100427335","display_name":"Bin Chen","orcid":"https://orcid.org/0000-0002-3979-021X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210150595","display_name":"Guangzhou Electronic Technology (China)","ror":"https://ror.org/03rq35s79","country_code":"CN","type":"company","lineage":["https://openalex.org/I4210150595"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bin Chen","raw_affiliation_strings":["Guangzhou Institute of Electronic Technology, Chinese Academy of Sciences, Guangzhou, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangzhou Institute of Electronic Technology, Chinese Academy of Sciences, Guangzhou, China","institution_ids":["https://openalex.org/I4210150595","https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102978709","display_name":"Yuefei Zhang","orcid":"https://orcid.org/0000-0001-8214-6270"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuefei Zhang","raw_affiliation_strings":["Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084983765","display_name":"Tao Feng","orcid":"https://orcid.org/0000-0001-9796-3441"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210165038","display_name":"University of Chinese Academy of Sciences","ror":"https://ror.org/05qbk4x57","country_code":"CN","type":"education","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210165038"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Feng","raw_affiliation_strings":["Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","University of Chinese Academy of Sciences, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Chengdu Institute of Computer Application, Chinese Academy of Sciences, Chengdu, China","institution_ids":["https://openalex.org/I19820366"]},{"raw_affiliation_string":"University of Chinese Academy of Sciences, Beijing, China","institution_ids":["https://openalex.org/I4210165038"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100427335"],"corresponding_institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210150595","https://openalex.org/I4210165038"],"apc_list":null,"apc_paid":null,"fwci":1.0275,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.78991068,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"40","issue":"3","first_page":"5653","last_page":"5668"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7012189626693726},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.6833156943321228},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6363760232925415},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6327800154685974},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48163455724716187},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4767338037490845},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4500482678413391},{"id":"https://openalex.org/keywords/chromosome-22","display_name":"Chromosome 22","score":0.4442134499549866},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32404130697250366},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3128686547279358},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23246052861213684},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10649669170379639}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7012189626693726},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.6833156943321228},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6363760232925415},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6327800154685974},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48163455724716187},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4767338037490845},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4500482678413391},{"id":"https://openalex.org/C54815482","wikidata":"https://www.wikidata.org/wiki/Q753805","display_name":"Chromosome 22","level":4,"score":0.4442134499549866},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32404130697250366},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3128686547279358},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23246052861213684},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10649669170379639}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3233/jifs-201466","is_oa":false,"landing_page_url":"https://doi.org/10.3233/jifs-201466","pdf_url":null,"source":{"id":"https://openalex.org/S179157397","display_name":"Journal of Intelligent & Fuzzy Systems","issn_l":"1064-1246","issn":["1064-1246","1875-8967"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Intelligent &amp; Fuzzy Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6000000238418579}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W1572931302","https://openalex.org/W1598217314","https://openalex.org/W1901129140","https://openalex.org/W1923697677","https://openalex.org/W1973344105","https://openalex.org/W1981198400","https://openalex.org/W1998557720","https://openalex.org/W2009798302","https://openalex.org/W2011658829","https://openalex.org/W2019333634","https://openalex.org/W2029115635","https://openalex.org/W2081193579","https://openalex.org/W2094974339","https://openalex.org/W2114040248","https://openalex.org/W2119175367","https://openalex.org/W2122531355","https://openalex.org/W2126046058","https://openalex.org/W2126842601","https://openalex.org/W2309909513","https://openalex.org/W2412782625","https://openalex.org/W2520149872","https://openalex.org/W2701156940","https://openalex.org/W2734417242","https://openalex.org/W2735226290","https://openalex.org/W2736536606","https://openalex.org/W2757454662","https://openalex.org/W2765669952","https://openalex.org/W2776904767","https://openalex.org/W2809287713","https://openalex.org/W2890885867","https://openalex.org/W2897281983","https://openalex.org/W2899332989","https://openalex.org/W2903440260","https://openalex.org/W2904413366","https://openalex.org/W2953149322","https://openalex.org/W2963542991","https://openalex.org/W2991471181","https://openalex.org/W3019362006","https://openalex.org/W3046539735","https://openalex.org/W3099004229","https://openalex.org/W6634278450","https://openalex.org/W6677067255","https://openalex.org/W6748118925","https://openalex.org/W6948097632"],"related_works":["https://openalex.org/W1522196789","https://openalex.org/W4232685899","https://openalex.org/W2061210909","https://openalex.org/W2077620286","https://openalex.org/W4300945800","https://openalex.org/W2061303619","https://openalex.org/W2076357883","https://openalex.org/W2064004378","https://openalex.org/W2004311082","https://openalex.org/W2436198393"],"abstract_inverted_index":{"Chromosome":[0],"visualization":[1,25,58],"has":[2],"been":[3],"used":[4,95,146],"in":[5,14,23,41,48,51,96,112,188],"human":[6],"chromosome":[7,24,32,52,57,80,98,117,128,153],"analysis":[8],"and":[9,17,44,62,176],"is":[10,26,63,72,137],"a":[11,42,69,161],"crucial":[12],"step":[13,22],"clinical":[15],"diagnosis":[16],"drug":[18],"development.":[19],"An":[20],"important":[21],"the":[27,75,85,97,140,148,170],"extraction":[28],"of":[29,56,78,87,151,172],"chromosomes":[30,111],"from":[31],"images":[33,81],"obtained":[34],"by":[35],"light":[36],"microscopy.":[37],"Chromosomes":[38],"often":[39],"overlap":[40],"complex":[43],"variable":[45],"manner,":[46],"resulting":[47],"significant":[49],"challenges":[50],"segmentation.":[53],"The":[54,105,155],"process":[55],"requires":[59],"manual":[60],"intervention":[61],"tedious.":[64],"A":[65],"method":[66],"based":[67,102,131],"on":[68,103,132],"neural":[70,181],"network":[71,182],"proposed":[73,106,156],"for":[74,147],"automatic":[76,149],"segmentation":[77,100,129,150,171],"overlapping":[79,110,116,127,152,174],"to":[82,169,184],"speed":[83],"up":[84],"workflow":[86],"visualizing":[88],"chromosomes.":[89],"Three":[90],"improved":[91,141,157],"dilated":[92,142,158],"convolutions":[93,143,159,187],"are":[94,177],"image":[99],"models":[101,107,121],"U-Net.":[104,133],"successfully":[108],"segment":[109],"two":[113],"publicly":[114],"available":[115],"data":[118],"sets.":[119],"Our":[120],"have":[122,160],"better":[123],"performance":[124,163],"than":[125],"existing":[126],"methods":[130],"In":[134],"summary,":[135],"it":[136],"demonstrated":[138],"that":[139],"can":[144,165],"be":[145,166],"images.":[154],"stable":[162],"improvement,":[164],"easily":[167],"extended":[168],"multiple":[173],"chromosomes,":[175],"suitable":[178],"as":[179],"general":[180],"operations":[183],"replace":[185],"standard":[186],"any":[189],"network.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
