{"id":"https://openalex.org/W2143448637","doi":"https://doi.org/10.3233/isu-2011-0627","title":"Semantic MEDLINE: An advanced information management application for biomedicine","display_name":"Semantic MEDLINE: An advanced information management application for biomedicine","publication_year":2011,"publication_date":"2011-09-06","ids":{"openalex":"https://openalex.org/W2143448637","doi":"https://doi.org/10.3233/isu-2011-0627","mag":"2143448637"},"language":"en","primary_location":{"id":"doi:10.3233/isu-2011-0627","is_oa":true,"landing_page_url":"https://doi.org/10.3233/isu-2011-0627","pdf_url":"https://content.iospress.com:443/download/information-services-and-use/isu627?id=information-services-and-use%2Fisu627","source":{"id":"https://openalex.org/S2764781207","display_name":"Information Services & Use","issn_l":"0167-5265","issn":["0167-5265","1875-8789"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Services & Use","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://content.iospress.com:443/download/information-services-and-use/isu627?id=information-services-and-use%2Fisu627","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046137010","display_name":"Thomas C. Rindflesch","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Thomas C. Rindflesch","raw_affiliation_strings":["Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA"],"affiliations":[{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]},{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016571803","display_name":"Halil Kilicoglu","orcid":"https://orcid.org/0000-0003-3987-9393"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Halil Kilicoglu","raw_affiliation_strings":["Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA"],"affiliations":[{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]},{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062552700","display_name":"Marcelo Fiszman","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcelo Fiszman","raw_affiliation_strings":["Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA"],"affiliations":[{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]},{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049096404","display_name":"Graciela Rosemblat","orcid":null},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Graciela Rosemblat","raw_affiliation_strings":["Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA"],"affiliations":[{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]},{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101579607","display_name":"Dongwook Shin","orcid":"https://orcid.org/0000-0003-1430-8869"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongwook Shin","raw_affiliation_strings":["Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA"],"affiliations":[{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]},{"raw_affiliation_string":"Lister Hill National Center for Biomedical Communications, National Library of Medicine, National Institutes of Health, Bethesda MD, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5046137010"],"corresponding_institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210109390"],"apc_list":null,"apc_paid":null,"fwci":3.1879,"has_fulltext":true,"cited_by_count":92,"citation_normalized_percentile":{"value":0.92601401,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"31","issue":"1-2","first_page":"15","last_page":"21"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.9847999811172485,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7782940864562988},{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.7248753905296326},{"id":"https://openalex.org/keywords/biomedicine","display_name":"Biomedicine","score":0.6984875202178955},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.613876461982727},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.5921562910079956},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.4495641887187958},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4193592965602875},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.41380006074905396},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.15782290697097778},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.13493189215660095}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7782940864562988},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.7248753905296326},{"id":"https://openalex.org/C66782513","wikidata":"https://www.wikidata.org/wiki/Q864601","display_name":"Biomedicine","level":2,"score":0.6984875202178955},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.613876461982727},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.5921562910079956},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.4495641887187958},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4193592965602875},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.41380006074905396},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.15782290697097778},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.13493189215660095},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3233/isu-2011-0627","is_oa":true,"landing_page_url":"https://doi.org/10.3233/isu-2011-0627","pdf_url":"https://content.iospress.com:443/download/information-services-and-use/isu627?id=information-services-and-use%2Fisu627","source":{"id":"https://openalex.org/S2764781207","display_name":"Information Services & Use","issn_l":"0167-5265","issn":["0167-5265","1875-8789"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Services & Use","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.3233/isu-2011-0627","is_oa":true,"landing_page_url":"https://doi.org/10.3233/isu-2011-0627","pdf_url":"https://content.iospress.com:443/download/information-services-and-use/isu627?id=information-services-and-use%2Fisu627","source":{"id":"https://openalex.org/S2764781207","display_name":"Information Services & Use","issn_l":"0167-5265","issn":["0167-5265","1875-8789"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Information Services & Use","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.7699999809265137,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2143448637.pdf","grobid_xml":"https://content.openalex.org/works/W2143448637.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W286875401","https://openalex.org/W1515174954","https://openalex.org/W1553529581","https://openalex.org/W1608124137","https://openalex.org/W1970711394","https://openalex.org/W1990821337","https://openalex.org/W1996003588","https://openalex.org/W2004206713","https://openalex.org/W2005311637","https://openalex.org/W2011726136","https://openalex.org/W2051608423","https://openalex.org/W2054070929","https://openalex.org/W2056325010","https://openalex.org/W2086014456","https://openalex.org/W2098201295","https://openalex.org/W2103427999","https://openalex.org/W2111330221","https://openalex.org/W2115007282","https://openalex.org/W2122402213","https://openalex.org/W2123789196","https://openalex.org/W2159583324","https://openalex.org/W2270018644","https://openalex.org/W2399766352","https://openalex.org/W4233525735","https://openalex.org/W6632006145"],"related_works":["https://openalex.org/W2366403280","https://openalex.org/W1495108544","https://openalex.org/W3148229873","https://openalex.org/W2150160875","https://openalex.org/W4242223894","https://openalex.org/W2091301346","https://openalex.org/W1517524280","https://openalex.org/W4389760904","https://openalex.org/W4306886878","https://openalex.org/W4323520239"],"abstract_inverted_index":{"To":[0],"support":[1],"more":[2],"effective":[3],"biomedical":[4],"information":[5,68],"management,":[6],"Semantic":[7,87,116],"MEDLINE":[8,61,88,117],"integrates":[9],"document":[10],"retrieval,":[11],"advanced":[12],"natural":[13],"language":[14],"processing,":[15],"automatic":[16],"summarization":[17],"and":[18,79,99,113],"visualization":[19],"into":[20,108],"a":[21,50],"single":[22],"Web":[23],"portal.":[24],"The":[25,63],"application":[26],"is":[27,47,118],"intended":[28],"to":[29,58,65],"help":[30],"manage":[31],"the":[32,43,59,76,100,125],"results":[33],"of":[34,53,103],"PubMed":[35],"searches":[36],"by":[37,95],"condensing":[38],"core":[39],"semantic":[40,54],"content":[41],"in":[42,110],"citations":[44],"retrieved.":[45],"Output":[46],"presented":[48],"as":[49],"connected":[51],"graph":[52],"relations,":[55],"with":[56,75,121],"links":[57],"original":[60],"citations.":[62],"ability":[64],"connect":[66],"salient":[67],"across":[69],"documents":[70],"helps":[71],"users":[72],"keep":[73],"up":[74],"research":[77,107,123],"literature":[78],"discover":[80],"connections":[81],"which":[82],"might":[83],"otherwise":[84],"go":[85],"unnoticed.":[86],"can":[89],"make":[90],"an":[91],"impact":[92],"on":[93,124],"biomedicine":[94],"supporting":[96],"scientific":[97],"discovery":[98],"timely":[101],"translation":[102],"insights":[104],"from":[105],"basic":[106],"advances":[109],"clinical":[111],"practice":[112],"patient":[114],"care.":[115],"illustrated":[119],"here":[120],"recent":[122],"clock":[126],"genes.":[127]},"counts_by_year":[{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":5}],"updated_date":"2026-03-10T14:07:55.174380","created_date":"2025-10-10T00:00:00"}