{"id":"https://openalex.org/W1617638893","doi":"https://doi.org/10.3233/fi-2011-542","title":"On the Hairpin Incompletion","display_name":"On the Hairpin Incompletion","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1617638893","doi":"https://doi.org/10.3233/fi-2011-542","mag":"1617638893"},"language":"en","primary_location":{"id":"doi:10.3233/fi-2011-542","is_oa":false,"landing_page_url":"https://doi.org/10.3233/fi-2011-542","pdf_url":null,"source":{"id":"https://openalex.org/S39012697","display_name":"Fundamenta Informaticae","issn_l":"0169-2968","issn":["0169-2968","1875-8681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Fundamenta Informaticae","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1102.3503","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039581358","display_name":"Fumiya Okubo","orcid":"https://orcid.org/0000-0002-0077-9072"},"institutions":[{"id":"https://openalex.org/I150744194","display_name":"Waseda University","ror":"https://ror.org/00ntfnx83","country_code":"JP","type":"education","lineage":["https://openalex.org/I150744194"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Fumiya Okubo","raw_affiliation_strings":["Graduate School of Education, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. f.okubo@akane.waseda.jp","Graduate School of Education, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. f.okubo@akane.waseda.jp#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Education, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. f.okubo@akane.waseda.jp","institution_ids":["https://openalex.org/I150744194"]},{"raw_affiliation_string":"Graduate School of Education, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. f.okubo@akane.waseda.jp#TAB#","institution_ids":["https://openalex.org/I150744194"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011386170","display_name":"Takashi Yokomori","orcid":"https://orcid.org/0000-0002-8384-0181"},"institutions":[{"id":"https://openalex.org/I150744194","display_name":"Waseda University","ror":"https://ror.org/00ntfnx83","country_code":"JP","type":"education","lineage":["https://openalex.org/I150744194"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takashi Yokomori","raw_affiliation_strings":["Department of Mathematics, Faculty of Education and Integrated Arts and Sciences, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. yokomori@waseda.jp","(Correspd.) Department of Mathematics, Faculty of Education and Integrated Arts and Sciences, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. yokomori@waseda.jp"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, Faculty of Education and Integrated Arts and Sciences, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. yokomori@waseda.jp","institution_ids":["https://openalex.org/I150744194"]},{"raw_affiliation_string":"(Correspd.) Department of Mathematics, Faculty of Education and Integrated Arts and Sciences, Waseda University, 1-6-1 Nishiwaseda, Shinjuku-ku, Tokyo 169-8050, Japan. yokomori@waseda.jp","institution_ids":["https://openalex.org/I150744194"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5039581358"],"corresponding_institution_ids":["https://openalex.org/I150744194"],"apc_list":null,"apc_paid":null,"fwci":0.266,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.57028736,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"110","issue":"1-4","first_page":"255","last_page":"269"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12784","display_name":"Modular Robots and Swarm Intelligence","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/2210","display_name":"Mechanical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9864000082015991,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.42316746711730957}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.42316746711730957}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.3233/fi-2011-542","is_oa":false,"landing_page_url":"https://doi.org/10.3233/fi-2011-542","pdf_url":null,"source":{"id":"https://openalex.org/S39012697","display_name":"Fundamenta Informaticae","issn_l":"0169-2968","issn":["0169-2968","1875-8681"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Fundamenta Informaticae","raw_type":"journal-article"},{"id":"pmh:oai:arXiv.org:1102.3503","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1102.3503","pdf_url":"https://arxiv.org/pdf/1102.3503","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.745.2793","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.745.2793","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://arxiv.org/pdf/1102.3503.pdf","raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1102.3503","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1102.3503","pdf_url":"https://arxiv.org/pdf/1102.3503","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.5899999737739563,"id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W154463842","https://openalex.org/W191395097","https://openalex.org/W388737692","https://openalex.org/W1501003016","https://openalex.org/W1514051560","https://openalex.org/W1522789774","https://openalex.org/W1846794955","https://openalex.org/W1988320644","https://openalex.org/W2018845878","https://openalex.org/W2058038744","https://openalex.org/W2086434437","https://openalex.org/W2089800073","https://openalex.org/W2122211325","https://openalex.org/W2180809675","https://openalex.org/W2696073070","https://openalex.org/W2914032487","https://openalex.org/W2949638642"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Hairpin":[0],"completion":[1,8],"and":[2,31,36,113,134,144,154,161],"its":[3,114],"variant":[4,23,76],"called":[5,24,58],"bounded":[6,68],"hairpin":[7,17,25,59,69,78,82,142,168],"are":[9],"operations":[10],"on":[11],"formal":[12,87],"languages,":[13],"inspired":[14],"by":[15],"a":[16,52,73,86,93,120,146],"formation":[18],"in":[19],"molecular":[20],"biology.":[21],"Another":[22],"lengthening":[26],"has":[27],"been":[28,45],"recently":[29],"introduced,":[30],"the":[32,81,103,111],"related":[33],"closure":[34,104],"properties":[35,105],"algorithmic":[37],"problems":[38],"concerning":[39],"several":[40],"families":[41,108],"of":[42,55,67,77,106,122,148],"languages":[43,123,149,153],"have":[44],"studied.":[46],"In":[47],"this":[48,56],"paper,":[49],"we":[50],"introduce":[51],"new":[53],"operation":[54,84,112],"kind,":[57],"incompletion":[60,83],"which":[61],"is":[62,137,163],"not":[63],"only":[64],"an":[65],"extension":[66],"completion,":[70],"but":[71],"also":[72,164],"restricted":[74],"(bounded)":[75],"lengthening.":[79],"Further,":[80],"provides":[85],"language":[88,107],"theoretic":[89],"framework":[90],"that":[91,119,145],"models":[92],"bio-molecular":[94],"technique":[95],"nowadays":[96],"known":[97],"as":[98],"Whiplash":[99],"PCR.":[100],"We":[101,117],"study":[102],"under":[109,125,139,156,166],"both":[110],"iterated":[115,141,167],"version.":[116],"show":[118],"family":[121,147],"closed":[124,138,155,165],"intersection":[126],"with":[127,131],"regular":[128,132],"sets,":[129,133],"concatenation":[130],"finite":[135],"union":[136],"one-sided":[140],"incompletion,":[143],"containing":[150],"all":[151],"linear":[152],"circular":[157],"permutation,":[158],"left":[159],"derivative":[160],"substitution":[162],"incompletion.":[169]},"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-05-03T06:03:33.228499","created_date":"2025-10-10T00:00:00"}
