{"id":"https://openalex.org/W4206829736","doi":"https://doi.org/10.3233/ao-210260","title":"Evaluating and extending the Informed Consent Ontology for representing permissions from the clinical domain","display_name":"Evaluating and extending the Informed Consent Ontology for representing permissions from the clinical domain","publication_year":2022,"publication_date":"2022-01-07","ids":{"openalex":"https://openalex.org/W4206829736","doi":"https://doi.org/10.3233/ao-210260","pmid":"https://pubmed.ncbi.nlm.nih.gov/36312514"},"language":"en","primary_location":{"id":"doi:10.3233/ao-210260","is_oa":false,"landing_page_url":"https://doi.org/10.3233/ao-210260","pdf_url":null,"source":{"id":"https://openalex.org/S31619775","display_name":"Applied Ontology","issn_l":"1570-5838","issn":["1570-5838","1875-8533"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Ontology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9616177","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086420018","display_name":"Elizabeth E. Umberfield","orcid":"https://orcid.org/0000-0001-5029-1158"},"institutions":[{"id":"https://openalex.org/I1324682000","display_name":"Regenstrief Institute","ror":"https://ror.org/05f2ywb48","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1324682000"]},{"id":"https://openalex.org/I4388446366","display_name":"Indiana University Indianapolis","ror":"https://ror.org/03eftgw80","country_code":"US","type":"education","lineage":["https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Elizabeth E. Umberfield","raw_affiliation_strings":["Center for Biomedical Informatics, Regenstrief Institute Inc., Indianapolis, IN, USA. E-mail:\u00a0eeumberf@iu.edu","Health Policy & Management, Richard M. Fairbanks School of Public Health, Indiana University, Indianapolis, IN, USA"],"affiliations":[{"raw_affiliation_string":"Center for Biomedical Informatics, Regenstrief Institute Inc., Indianapolis, IN, USA. E-mail:\u00a0eeumberf@iu.edu","institution_ids":["https://openalex.org/I1324682000"]},{"raw_affiliation_string":"Health Policy & Management, Richard M. Fairbanks School of Public Health, Indiana University, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427","https://openalex.org/I4388446366"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102883901","display_name":"Cooper Stansbury","orcid":"https://orcid.org/0000-0002-8545-740X"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cooper Stansbury","raw_affiliation_strings":["Computational Medicine and Bioinformatics, Medical School, University of Michigan, Ann Arbor, MI, USA","Institute for Computational Discovery & Engineering, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0cstansbu@umich.edu"],"affiliations":[{"raw_affiliation_string":"Computational Medicine and Bioinformatics, Medical School, University of Michigan, Ann Arbor, MI, USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Institute for Computational Discovery & Engineering, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0cstansbu@umich.edu","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063198817","display_name":"Kathleen Ford","orcid":"https://orcid.org/0000-0003-0822-6779"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kathleen Ford","raw_affiliation_strings":["School of Nursing, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0kafing@gmail.com"],"affiliations":[{"raw_affiliation_string":"School of Nursing, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0kafing@gmail.com","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048281848","display_name":"Yun Jiang","orcid":"https://orcid.org/0000-0001-6737-5016"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yun Jiang","raw_affiliation_strings":["Systems, Populations and Leadership, School of Nursing, University of Michigan, Ann Arbor, MI, USA. E-mails:\u00a0jiangyu@umich.edu,\u00a0mrhrrs@umich.edu"],"affiliations":[{"raw_affiliation_string":"Systems, Populations and Leadership, School of Nursing, University of Michigan, Ann Arbor, MI, USA. E-mails:\u00a0jiangyu@umich.edu,\u00a0mrhrrs@umich.edu","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042121948","display_name":"Sharon L. R. Kardia","orcid":"https://orcid.org/0000-0002-9853-3379"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sharon L.R. Kardia","raw_affiliation_strings":["Epidemiology, School of Public Health, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0skardia@umich.edu"],"affiliations":[{"raw_affiliation_string":"Epidemiology, School of Public Health, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0skardia@umich.edu","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Andrea K. Thomer","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrea K. Thomer","raw_affiliation_strings":["School of Information, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0athomer@umich.edu"],"affiliations":[{"raw_affiliation_string":"School of Information, University of Michigan, Ann Arbor, MI, USA. E-mail:\u00a0athomer@umich.edu","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057980907","display_name":"Marcelline R. Harris","orcid":"https://orcid.org/0000-0002-3957-6643"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcelline R. Harris","raw_affiliation_strings":["Systems, Populations and Leadership, School of Nursing, University of Michigan, Ann Arbor, MI, USA. E-mails:\u00a0jiangyu@umich.edu,\u00a0mrhrrs@umich.edu"],"affiliations":[{"raw_affiliation_string":"Systems, Populations and Leadership, School of Nursing, University of Michigan, Ann Arbor, MI, USA. E-mails:\u00a0jiangyu@umich.edu,\u00a0mrhrrs@umich.edu","institution_ids":["https://openalex.org/I27837315"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5086420018"],"corresponding_institution_ids":["https://openalex.org/I1324682000","https://openalex.org/I4388446366","https://openalex.org/I55769427"],"apc_list":null,"apc_paid":null,"fwci":0.7979,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.7092729,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"17","issue":"2","first_page":"321","last_page":"336"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.989300012588501,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.769149899482727},{"id":"https://openalex.org/keywords/reuse","display_name":"Reuse","score":0.5876251459121704},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5755206942558289},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5311970114707947},{"id":"https://openalex.org/keywords/permission","display_name":"Permission","score":0.5046654939651489},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4397762417793274}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.769149899482727},{"id":"https://openalex.org/C206588197","wikidata":"https://www.wikidata.org/wiki/Q846574","display_name":"Reuse","level":2,"score":0.5876251459121704},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5755206942558289},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5311970114707947},{"id":"https://openalex.org/C2779089604","wikidata":"https://www.wikidata.org/wiki/Q7169333","display_name":"Permission","level":2,"score":0.5046654939651489},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4397762417793274},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.3233/ao-210260","is_oa":false,"landing_page_url":"https://doi.org/10.3233/ao-210260","pdf_url":null,"source":{"id":"https://openalex.org/S31619775","display_name":"Applied Ontology","issn_l":"1570-5838","issn":["1570-5838","1875-8533"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Ontology","raw_type":"journal-article"},{"id":"pmid:36312514","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36312514","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied ontology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9616177","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9616177","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Appl Ontol","raw_type":"Text"},{"id":"pmh:oai:scholarworks.indianapolis.iu.edu:1805/35482","is_oa":false,"landing_page_url":"https://hdl.handle.net/1805/35482","pdf_url":null,"source":{"id":"https://openalex.org/S4306400987","display_name":"IUScholarWorks (Indiana University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I592451","host_organization_name":"Indiana University","host_organization_lineage":["https://openalex.org/I592451"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PMC","raw_type":"Article"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:9616177","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9616177","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Appl Ontol","raw_type":"Text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.4300000071525574}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":50,"referenced_works":["https://openalex.org/W41571224","https://openalex.org/W1802346448","https://openalex.org/W1871852719","https://openalex.org/W1974441155","https://openalex.org/W2021074129","https://openalex.org/W2063700330","https://openalex.org/W2078161054","https://openalex.org/W2102983252","https://openalex.org/W2113142309","https://openalex.org/W2116034137","https://openalex.org/W2120534674","https://openalex.org/W2122507714","https://openalex.org/W2124045889","https://openalex.org/W2125904022","https://openalex.org/W2135140530","https://openalex.org/W2135206585","https://openalex.org/W2141201603","https://openalex.org/W2142678031","https://openalex.org/W2144427809","https://openalex.org/W2146980252","https://openalex.org/W2149040964","https://openalex.org/W2163052755","https://openalex.org/W2189408243","https://openalex.org/W2266614975","https://openalex.org/W2302501749","https://openalex.org/W2346890176","https://openalex.org/W2394638728","https://openalex.org/W2405033759","https://openalex.org/W2408202220","https://openalex.org/W2462007197","https://openalex.org/W2464683149","https://openalex.org/W2516492474","https://openalex.org/W2531883117","https://openalex.org/W2591705325","https://openalex.org/W2750784791","https://openalex.org/W2950595506","https://openalex.org/W2965518110","https://openalex.org/W2990250511","https://openalex.org/W3016675806","https://openalex.org/W3025660579","https://openalex.org/W3174740997","https://openalex.org/W3181441634","https://openalex.org/W4292195936","https://openalex.org/W4300035993","https://openalex.org/W4327513196","https://openalex.org/W6680145453","https://openalex.org/W6712383833","https://openalex.org/W6713571491","https://openalex.org/W6902710496","https://openalex.org/W6931305101"],"related_works":["https://openalex.org/W2374086689","https://openalex.org/W3176279093","https://openalex.org/W2373945265","https://openalex.org/W2370203001","https://openalex.org/W1912565424","https://openalex.org/W4246410201","https://openalex.org/W1968505275","https://openalex.org/W2959939328","https://openalex.org/W2924049741","https://openalex.org/W2759030965"],"abstract_inverted_index":{"The":[0],"purpose":[1],"of":[2,22,55,88,105,144,178],"this":[3],"study":[4,30,54],"was":[5],"to":[6,72,156],"evaluate,":[7],"revise,":[8],"and":[9,26,36,52,62,75,82,96,122,148,172,182],"extend":[10],"the":[11,46,109,157],"Informed":[12],"Consent":[13],"Ontology":[14],"(ICO)":[15],"for":[16,108,128,175],"expressing":[17],"clinical":[18,24,56,66,110,140,146,180],"permissions,":[19,141],"including":[20,142],"reuse":[21,143,177],"residual":[23,145,179],"biospecimens":[25,147,181],"health":[27,149,183],"data.":[28,150],"This":[29,130],"followed":[31,78],"a":[32,38,53,86,133,170],"formative":[33],"evaluation":[34,90],"design":[35],"used":[37],"bottom-up":[39],"modeling":[40],"approach.":[41],"Data":[42],"were":[43,69,115,126],"collected":[44],"from":[45,65,119],"literature":[47],"on":[48,85],"US":[49],"federal":[50,60],"regulations":[51,61],"consent":[57,67],"forms.":[58],"Eleven":[59],"fifteen":[63],"permission-sentences":[64],"forms":[68],"iteratively":[70],"modeled":[71],"identify":[73],"entities":[74],"their":[76],"relationships,":[77],"by":[79],"community":[80],"reflection":[81],"negotiation":[83],"based":[84],"series":[87],"predetermined":[89],"questions.":[91],"ICO":[92,107,118,167],"included":[93],"fifty-two":[94],"classes":[95,114,125],"twelve":[97,123],"object":[98],"properties":[99],"necessary":[100],"when":[101],"modeling,":[102],"demonstrating":[103],"appropriateness":[104],"extending":[106],"domain.":[111],"Twenty-six":[112],"additional":[113],"imported":[116],"into":[117],"other":[120,163],"ontologies,":[121],"new":[124],"recommended":[127],"development.":[129],"work":[131],"addresses":[132],"critical":[134],"gap":[135],"in":[136],"formally":[137],"representing":[138],"permissions":[139],"It":[151],"makes":[152],"missing":[153],"content":[154],"available":[155],"OBO":[158],"Foundry,":[159],"enabling":[160],"use":[161],"alongside":[162],"widely-adopted":[164],"biomedical":[165],"ontologies.":[166],"serves":[168],"as":[169],"machine-interpretable":[171],"interoperable":[173],"tool":[174],"responsible":[176],"data":[184],"at":[185],"scale.":[186]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
