{"id":"https://openalex.org/W1891509111","doi":"https://doi.org/10.3233/ao-2011-0097","title":"Flexibility and utility of the cell cycle ontology","display_name":"Flexibility and utility of the cell cycle ontology","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W1891509111","doi":"https://doi.org/10.3233/ao-2011-0097","mag":"1891509111"},"language":"en","primary_location":{"id":"doi:10.3233/ao-2011-0097","is_oa":false,"landing_page_url":"https://doi.org/10.3233/ao-2011-0097","pdf_url":null,"source":{"id":"https://openalex.org/S31619775","display_name":"Applied Ontology","issn_l":"1570-5838","issn":["1570-5838","1875-8533"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Ontology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10810/69709","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080056836","display_name":"Vladimir Mironov","orcid":"https://orcid.org/0000-0002-9454-5823"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Vladimir Mironov","raw_affiliation_strings":["Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no","Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no","institution_ids":["https://openalex.org/I204778367"]},{"raw_affiliation_string":"Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no#TAB#","institution_ids":["https://openalex.org/I204778367"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059590876","display_name":"Erick Antezana","orcid":"https://orcid.org/0000-0002-2497-8236"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Erick Antezana","raw_affiliation_strings":["Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no","Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no","institution_ids":["https://openalex.org/I204778367"]},{"raw_affiliation_string":"Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no#TAB#","institution_ids":["https://openalex.org/I204778367"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090216571","display_name":"Mikel Ega\u00f1a Aranguren","orcid":"https://orcid.org/0000-0001-8081-1839"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mikel Ega\u00f1a","raw_affiliation_strings":["School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac.uk","School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac.uk#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac.uk","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac.uk#TAB#","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083985501","display_name":"Ward Blond\u00e9","orcid":"https://orcid.org/0000-0001-7624-4069"},"institutions":[{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Ward Blond\u00e9","raw_affiliation_strings":["Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium. E-mails: {ward.blonde, bernard.debaets}@ugent.be"],"affiliations":[{"raw_affiliation_string":"Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium. E-mails: {ward.blonde, bernard.debaets}@ugent.be","institution_ids":["https://openalex.org/I32597200"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012437460","display_name":"Bernard De Baets","orcid":"https://orcid.org/0000-0002-3876-620X"},"institutions":[{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Bernard De Baets","raw_affiliation_strings":["Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium. E-mails: {ward.blonde, bernard.debaets}@ugent.be"],"affiliations":[{"raw_affiliation_string":"Department of Mathematical Modelling, Statistics and Bioinformatics, Ghent University, Ghent, Belgium. E-mails: {ward.blonde, bernard.debaets}@ugent.be","institution_ids":["https://openalex.org/I32597200"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077915624","display_name":"Martin Kuiper","orcid":"https://orcid.org/0000-0002-1171-9876"},"institutions":[{"id":"https://openalex.org/I204778367","display_name":"Norwegian University of Science and Technology","ror":"https://ror.org/05xg72x27","country_code":"NO","type":"education","lineage":["https://openalex.org/I204778367"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Martin Kuiper","raw_affiliation_strings":["Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no","Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no","institution_ids":["https://openalex.org/I204778367"]},{"raw_affiliation_string":"Department of Biology, Norwegian University of Science and Technology, Trondheim, Norway. E-mails: {vladimir.mironov, erick.antezana, martin.kuiper}@bio.ntnu.no#TAB#","institution_ids":["https://openalex.org/I204778367"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049799218","display_name":"Robert Stevens","orcid":"https://orcid.org/0000-0002-6038-9025"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Robert Stevens","raw_affiliation_strings":["School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac.uk","(Correspd. E-mail: robert.stevens@manchester.ac.uk) School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac ...#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac.uk","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"(Correspd. E-mail: robert.stevens@manchester.ac.uk) School of Computer Science, The University of Manchester, Manchester, UK. E-mails: mikel.egana.aranguren@gmail.com, robert.stevens@manchester.ac ...#TAB#","institution_ids":["https://openalex.org/I28407311"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5080056836"],"corresponding_institution_ids":["https://openalex.org/I204778367"],"apc_list":null,"apc_paid":null,"fwci":0.1334,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.51282696,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"6","issue":"3","first_page":"247","last_page":"261"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8160490989685059},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.6768521070480347},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6351313591003418},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.32972803711891174},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3289177119731903},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.1092359721660614},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06675350666046143},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.06618496775627136}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8160490989685059},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.6768521070480347},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6351313591003418},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.32972803711891174},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3289177119731903},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.1092359721660614},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06675350666046143},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.06618496775627136},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.3233/ao-2011-0097","is_oa":false,"landing_page_url":"https://doi.org/10.3233/ao-2011-0097","pdf_url":null,"source":{"id":"https://openalex.org/S31619775","display_name":"Applied Ontology","issn_l":"1570-5838","issn":["1570-5838","1875-8533"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Ontology","raw_type":"journal-article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/2dac9c46-639f-4d8e-b3c8-25a51b1a80c6","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/2dac9c46-639f-4d8e-b3c8-25a51b1a80c6","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Mironov, V, Antezana, E, Egaa, M, Blond\u00e9, W, De Baets, B, Kuiper, M & Stevens, R 2011, 'Flexibility and utility of the cell cycle ontology', Applied Ontology, vol. 6, no. 3, pp. 247-261. https://doi.org/10.3233/AO-2011-0097","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:addi.ehu.eus:10810/69709","is_oa":true,"landing_page_url":"http://hdl.handle.net/10810/69709","pdf_url":null,"source":{"id":"https://openalex.org/S4306401964","display_name":"Communities in ADDI (University of the Basque Country)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169108374","host_organization_name":"University of the Basque Country","host_organization_lineage":["https://openalex.org/I169108374"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:archive.ugent.be:2135720","is_oa":false,"landing_page_url":"https://biblio.ugent.be/publication/2135720","pdf_url":null,"source":{"id":"https://openalex.org/S4306400478","display_name":"Ghent University Academic Bibliography (Ghent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I32597200","host_organization_name":"Ghent University","host_organization_lineage":["https://openalex.org/I32597200"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1570-5838","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.atira.dk:publications/2dac9c46-639f-4d8e-b3c8-25a51b1a80c6","is_oa":false,"landing_page_url":"https://www.research.manchester.ac.uk/portal/en/publications/flexibility-and-utility-of-the-cell-cycle-ontology(2dac9c46-639f-4d8e-b3c8-25a51b1a80c6).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Mironov, V, Antezana, E, Egaa, M, Blond\u00e9, W, De Baets, B, Kuiper, M & Stevens, R 2011, 'Flexibility and utility of the cell cycle ontology', Applied Ontology, vol. 6, no. 3, pp. 247-261. https://doi.org/10.3233/AO-2011-0097","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:zenodo.org:13893196","is_oa":true,"landing_page_url":"https://doi.org/10.3233/AO-2011-0097","pdf_url":null,"source":{"id":"https://openalex.org/S4306400562","display_name":"Zenodo (CERN European Organization for Nuclear Research)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I67311998","host_organization_name":"European Organization for Nuclear Research","host_organization_lineage":["https://openalex.org/I67311998"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:addi.ehu.eus:10810/69709","is_oa":true,"landing_page_url":"http://hdl.handle.net/10810/69709","pdf_url":null,"source":{"id":"https://openalex.org/S4306401964","display_name":"Communities in ADDI (University of the Basque Country)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169108374","host_organization_name":"University of the Basque Country","host_organization_lineage":["https://openalex.org/I169108374"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W64819943","https://openalex.org/W132151164","https://openalex.org/W638789088","https://openalex.org/W1481492534","https://openalex.org/W1501546233","https://openalex.org/W1838034317","https://openalex.org/W1970871693","https://openalex.org/W1977027195","https://openalex.org/W1990890881","https://openalex.org/W2066024537","https://openalex.org/W2066908194","https://openalex.org/W2069356566","https://openalex.org/W2089691764","https://openalex.org/W2096525273","https://openalex.org/W2096704019","https://openalex.org/W2097698606","https://openalex.org/W2099218891","https://openalex.org/W2103017472","https://openalex.org/W2103260426","https://openalex.org/W2107643858","https://openalex.org/W2108491719","https://openalex.org/W2110324082","https://openalex.org/W2113142309","https://openalex.org/W2113439138","https://openalex.org/W2124890217","https://openalex.org/W2129994470","https://openalex.org/W2136539307","https://openalex.org/W2137428218","https://openalex.org/W2137999759","https://openalex.org/W2139694094","https://openalex.org/W2146827200","https://openalex.org/W2155814345","https://openalex.org/W2159675211","https://openalex.org/W2161062388","https://openalex.org/W2169049983","https://openalex.org/W2169595312","https://openalex.org/W2914543930","https://openalex.org/W3021516854","https://openalex.org/W4231041617","https://openalex.org/W4239164308","https://openalex.org/W4244301936"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2130043461","https://openalex.org/W2530322880","https://openalex.org/W1596801655"],"abstract_inverted_index":{"The":[0],"Cell":[1],"Cycle":[2],"Ontology":[3],"(CCO)":[4],"has":[5],"the":[6,18,21,38],"aim":[7],"to":[8,27],"provide":[9],"a":[10,31],"\u2018one":[11],"stop":[12],"shop\u2019":[13],"for":[14],"scientists":[15],"interested":[16],"in":[17,44],"biology":[19],"of":[20],"cell":[22],"cycle":[23],"that":[24],"would":[25],"like":[26],"ask":[28],"questions":[29],"from":[30],"molecular":[32],"and/or":[33],"systems":[34],"perspective:":[35],"what":[36],"are":[37],"genes,":[39],"proteins,":[40],"and":[41],"so":[42],"on":[43]},"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-03T22:45:19.894376","created_date":"2025-10-10T00:00:00"}