{"id":"https://openalex.org/W1605435477","doi":"https://doi.org/10.3233/ao-2009-0066","title":"Special Issue: Biomedical Ontology in Action","display_name":"Special Issue: Biomedical Ontology in Action","publication_year":2009,"publication_date":"2009-01-01","ids":{"openalex":"https://openalex.org/W1605435477","doi":"https://doi.org/10.3233/ao-2009-0066","mag":"1605435477"},"language":"en","primary_location":{"id":"doi:10.3233/ao-2009-0066","is_oa":false,"landing_page_url":"https://doi.org/10.3233/ao-2009-0066","pdf_url":null,"source":{"id":"https://openalex.org/S31619775","display_name":"Applied Ontology","issn_l":"1570-5838","issn":["1570-5838","1875-8533"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Ontology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073807945","display_name":"Olivier Bodenreider","orcid":"https://orcid.org/0000-0003-4769-4217"},"institutions":[{"id":"https://openalex.org/I2800548410","display_name":"United States National Library of Medicine","ror":"https://ror.org/0060t0j89","country_code":"US","type":"archive","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Olivier Bodenreider","raw_affiliation_strings":["National Library of Medicine, Bethesda, MD, USA. E-mail: olivier@nlm.nih.gov#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Library of Medicine, Bethesda, MD, USA. E-mail: olivier@nlm.nih.gov#TAB#","institution_ids":["https://openalex.org/I2800548410"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5073807945"],"corresponding_institution_ids":["https://openalex.org/I2800548410"],"apc_list":null,"apc_paid":null,"fwci":0.2703,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.58140072,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"4","issue":"1","first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12881","display_name":"linguistics and terminology studies","score":0.9196000099182129,"subfield":{"id":"https://openalex.org/subfields/1203","display_name":"Language and Linguistics"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8268654346466064},{"id":"https://openalex.org/keywords/action","display_name":"Action (physics)","score":0.59694904088974},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5687573552131653},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3336724042892456},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.16408014297485352},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.08775696158409119}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8268654346466064},{"id":"https://openalex.org/C2780791683","wikidata":"https://www.wikidata.org/wiki/Q846785","display_name":"Action (physics)","level":2,"score":0.59694904088974},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5687573552131653},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3336724042892456},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.16408014297485352},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.08775696158409119},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3233/ao-2009-0066","is_oa":false,"landing_page_url":"https://doi.org/10.3233/ao-2009-0066","pdf_url":null,"source":{"id":"https://openalex.org/S31619775","display_name":"Applied Ontology","issn_l":"1570-5838","issn":["1570-5838","1875-8533"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Applied Ontology","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W6496355","https://openalex.org/W175222683","https://openalex.org/W1457910469","https://openalex.org/W1494147629","https://openalex.org/W1523150955","https://openalex.org/W1582774629","https://openalex.org/W1623284047","https://openalex.org/W1772637012","https://openalex.org/W1804396726","https://openalex.org/W1812217105","https://openalex.org/W1884111252","https://openalex.org/W1964298951","https://openalex.org/W2002043951","https://openalex.org/W2041428546","https://openalex.org/W2073627046","https://openalex.org/W2091729411","https://openalex.org/W2103260426","https://openalex.org/W2116761798","https://openalex.org/W2127480960","https://openalex.org/W2130499759","https://openalex.org/W2137999759","https://openalex.org/W2148118756","https://openalex.org/W2156997379","https://openalex.org/W2294472426","https://openalex.org/W2418812392"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2130043461","https://openalex.org/W2530322880"],"abstract_inverted_index":{"Biomedical":[0],"ontology":[1,78],"is":[2],"now":[3],"an":[4,74],"important":[5],"element":[6],"of":[7,33,63,71,83,112,170],"biomedical":[8,40,77,84,113,174],"research":[9,35],"(Blake":[10],"&":[11,151,193,197,207],"Bult,":[12],"2006),":[13],"healthcare":[14],"(Garde":[15],"et":[16,88,102,117,134,160,164,189],"al.,":[17,89,103,118,135,161,165,190],"2007)":[18],"and":[19,47,65,93,125,129,141,146,154,179],"public":[20],"health":[21],"(Balkanyi,":[22],"2007),":[23,90,153],"especially":[24],"when":[25],"it":[26],"comes":[27],"to":[28,56],"integrating":[29],"datasets":[30],"in":[31,52,54,68,98,186],"support":[32],"translational":[34],"(Ruttenberg,":[36],"2007).":[37,166],"Broadly":[38],"defined,":[39],"ontologies":[41,85,100,114,131,148,175],"include":[42],"the":[43,61,81,95,110,171],"thesauri,":[44],"terminologies,":[45],"classifications":[46],"other":[48],"coding":[49],"systems":[50],"used":[51,97],"biomedicine,":[53],"addition":[55],"those":[57],"resources":[58],"concerned":[59],"with":[60],"identification":[62],"categories":[64],"their":[66,156,177,183],"interrelations":[67],"various":[69],"subdomains":[70],"biomedicine.":[72],"As":[73],"academic":[75],"discipline,":[76],"has":[79,91,108],"investigated":[80],"organization":[82],"(e.g.,":[86,115,132,149,158],"Bales":[87],"defined":[92],"contrasted":[94],"relations":[96],"these":[99],"(Smith":[101],"2005),":[104],"and,":[105],"more":[106],"generally,":[107],"studied":[109],"characteristics":[111],"Ogren":[116],"2004).":[119],"Some":[120],"groups":[121],"have":[122],"developed":[123],"principles":[124],"languages":[126],"for":[127,143],"representing":[128],"creating":[130],"Noy":[133],"2008),":[136],"as":[137,139],"well":[138],"algorithms":[140],"tools":[142],"editing,":[144],"aligning":[145],"visualizing":[147],"Zhang":[150],"Bodenreider,":[152],"assessing":[155],"consistency":[157],"Ceusters":[159],"2005;":[162],"Wang":[163],"A":[167],"significant":[168],"proportion":[169],"literature":[172],"about":[173],"emphasizes":[176],"design":[178],"structural":[180],"characteristics,":[181],"mentioning":[182],"use":[184],"only":[185],"passing":[187],"(Wang":[188],"2007;":[191],"Bodenreider":[192,206],"Stevens,":[194],"2006;":[195,199,203,205],"Cimino":[196],"Zhu,":[198],"Coonan,":[200],"2004;":[201],"Giannangelo,":[202],"Yu,":[204],"Burgun,":[208],"2005).":[209]},"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-30T06:05:26.967640","created_date":"2025-10-10T00:00:00"}
