{"id":"https://openalex.org/W2786132110","doi":"https://doi.org/10.3233/978-1-61499-830-3-910","title":"A Semi-Automatic Framework to Identify Abnormal States in EHR Narratives","display_name":"A Semi-Automatic Framework to Identify Abnormal States in EHR Narratives","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2786132110","doi":"https://doi.org/10.3233/978-1-61499-830-3-910","mag":"2786132110","pmid":"https://pubmed.ncbi.nlm.nih.gov/29295232"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-830-3-910","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-830-3-910","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062123396","display_name":"Xiaojun Ma","orcid":"https://orcid.org/0000-0001-6851-3644"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Ma Xiaojun","raw_affiliation_strings":["Graduate School of Medicine, The University of Tokyo, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Medicine, The University of Tokyo, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101780955","display_name":"Takeshi Imai","orcid":"https://orcid.org/0000-0002-8708-079X"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Imai Takeshi","raw_affiliation_strings":["Graduate School of Medicine, The University of Tokyo, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Medicine, The University of Tokyo, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023820316","display_name":"Emiko Shinohara","orcid":"https://orcid.org/0000-0002-9899-8678"},"institutions":[{"id":"https://openalex.org/I4210109338","display_name":"University of Tokyo Hospital","ror":"https://ror.org/022cvpj02","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210109338"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shinohara Emiko","raw_affiliation_strings":["The University of Tokyo Hospital, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"The University of Tokyo Hospital, Tokyo, Japan","institution_ids":["https://openalex.org/I4210109338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083795861","display_name":"Ryota Sakurai","orcid":"https://orcid.org/0000-0002-3475-9686"},"institutions":[{"id":"https://openalex.org/I4210109338","display_name":"University of Tokyo Hospital","ror":"https://ror.org/022cvpj02","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210109338"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Sakurai Ryota","raw_affiliation_strings":["The University of Tokyo Hospital, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"The University of Tokyo Hospital, Tokyo, Japan","institution_ids":["https://openalex.org/I4210109338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051448264","display_name":"Kouji Kozaki","orcid":"https://orcid.org/0000-0003-4578-4980"},"institutions":[{"id":"https://openalex.org/I4210138169","display_name":"Osaka Research Institute of Industrial Science and Technology","ror":"https://ror.org/03r38cy24","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210138169"]},{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kozaki Kouji","raw_affiliation_strings":["The Institute of Scientific and Industrial Research, Osaka University, Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"The Institute of Scientific and Industrial Research, Osaka University, Osaka, Japan","institution_ids":["https://openalex.org/I4210138169","https://openalex.org/I98285908"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052636056","display_name":"Kazuhiko Ohe","orcid":"https://orcid.org/0000-0002-4296-9536"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Ohe Kazuhiko","raw_affiliation_strings":["Graduate School of Medicine, The University of Tokyo, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Medicine, The University of Tokyo, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5062123396"],"corresponding_institution_ids":["https://openalex.org/I74801974"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.21774913,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"245","issue":null,"first_page":"910","last_page":"914"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9462000131607056,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9462000131607056,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/narrative","display_name":"Narrative","score":0.7265423536300659},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5440626740455627},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37661105394363403},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3740508556365967},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.16309744119644165},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.053339481353759766}],"concepts":[{"id":"https://openalex.org/C199033989","wikidata":"https://www.wikidata.org/wiki/Q1318295","display_name":"Narrative","level":2,"score":0.7265423536300659},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5440626740455627},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37661105394363403},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3740508556365967},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.16309744119644165},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.053339481353759766}],"mesh":[{"descriptor_ui":"D003933","descriptor_name":"Diagnosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003933","descriptor_name":"Diagnosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003933","descriptor_name":"Diagnosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033262","descriptor_name":"Narration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033262","descriptor_name":"Narration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D033262","descriptor_name":"Narration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-830-3-910","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-830-3-910","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:29295232","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29295232","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.550000011920929}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2348886128","https://openalex.org/W2388067091","https://openalex.org/W2367656648","https://openalex.org/W2390279801","https://openalex.org/W2350200549","https://openalex.org/W2362132076","https://openalex.org/W2965396777"],"abstract_inverted_index":{"Disease":[0],"ontology,":[1],"defined":[2],"as":[3],"a":[4,14,66],"causal":[5],"chain":[6],"of":[7,46,48,54,102,109],"abnormal":[8,55,71,104,116],"states,":[9],"is":[10,32,95,122],"believed":[11],"to":[12,69,79],"be":[13],"valuable":[15],"knowledge":[16],"base":[17],"in":[18,38,73,97,106,124],"medical":[19],"information":[20,58,126],"systems.":[21],"Automatic":[22],"mapping":[23,82,99],"between":[24,84],"electronic":[25],"health":[26],"records":[27],"(EHR)":[28],"and":[29,86],"disease":[30,36,87],"ontology":[31,37],"indispensable":[33],"for":[34,100,118],"applying":[35],"real":[39],"clinical":[40,61,74,128],"settings.":[41],"Based":[42],"on":[43],"an":[44],"analysis":[45],"ontologies":[47,108],"148":[49],"chronic":[50,110],"diseases,":[51],"approximately":[52],"41%":[53],"states":[56,72,105,117],"require":[57],"extraction":[59],"from":[60,127],"narratives.":[62,75,129],"This":[63,76],"paper":[64],"presents":[65],"semi-automatic":[67],"framework":[68,77],"identify":[70],"aims":[78],"effectively":[80],"build":[81],"modules":[83],"EHR":[85],"ontology.":[88],"We":[89],"show":[90],"that":[91],"the":[92,103,107,115],"proposed":[93],"method":[94,121],"effective":[96],"data":[98],"18%-33%":[101],"diseases.":[111],"Moreover,":[112],"we":[113],"analyze":[114],"which":[119],"our":[120],"invalid":[123],"extracting":[125]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}