{"id":"https://openalex.org/W2787390111","doi":"https://doi.org/10.3233/978-1-61499-830-3-452","title":"Developing Methodologies to Find Abbreviated Laboratory Test Names in Narrative Clinical Documents by Generating High Quality Q-Grams","display_name":"Developing Methodologies to Find Abbreviated Laboratory Test Names in Narrative Clinical Documents by Generating High Quality Q-Grams","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2787390111","doi":"https://doi.org/10.3233/978-1-61499-830-3-452","mag":"2787390111","pmid":"https://pubmed.ncbi.nlm.nih.gov/29295135"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-830-3-452","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-830-3-452","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102020046","display_name":"Kyung Mo Kim","orcid":"https://orcid.org/0000-0001-7896-6751"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Kim Kyungmo","raw_affiliation_strings":["Interdisciplinary program for Bioengineering, Seoul National University, Seoul 03080, South Korea"],"affiliations":[{"raw_affiliation_string":"Interdisciplinary program for Bioengineering, Seoul National University, Seoul 03080, South Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051234199","display_name":"Jinwook Choi","orcid":"https://orcid.org/0000-0002-9424-9944"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Choi Jinwook","raw_affiliation_strings":["Interdisciplinary program for Bioengineering, Seoul National University, Seoul 03080, South Korea"],"affiliations":[{"raw_affiliation_string":"Interdisciplinary program for Bioengineering, Seoul National University, Seoul 03080, South Korea","institution_ids":["https://openalex.org/I139264467"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5102020046"],"corresponding_institution_ids":["https://openalex.org/I139264467"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19969216,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"245","issue":null,"first_page":"452","last_page":"456"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9926000237464905,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.6739678978919983},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6100971102714539},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.5668286681175232},{"id":"https://openalex.org/keywords/narrative","display_name":"Narrative","score":0.541713297367096},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.42974787950515747},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42119142413139343},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.323323130607605},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.18112227320671082},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07813191413879395},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.06513717770576477}],"concepts":[{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.6739678978919983},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6100971102714539},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.5668286681175232},{"id":"https://openalex.org/C199033989","wikidata":"https://www.wikidata.org/wiki/Q1318295","display_name":"Narrative","level":2,"score":0.541713297367096},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.42974787950515747},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42119142413139343},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.323323130607605},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.18112227320671082},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07813191413879395},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.06513717770576477},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033262","descriptor_name":"Narration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033262","descriptor_name":"Narration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D033262","descriptor_name":"Narration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-830-3-452","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-830-3-452","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:29295135","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29295135","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education","score":0.550000011920929}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2348886128","https://openalex.org/W2388067091","https://openalex.org/W2367656648","https://openalex.org/W2350200549","https://openalex.org/W2362132076","https://openalex.org/W2965396777","https://openalex.org/W2389168924","https://openalex.org/W2067294484","https://openalex.org/W4280593102","https://openalex.org/W2170000670"],"abstract_inverted_index":{"Laboratory":[0],"test":[1,101,142],"names":[2],"are":[3],"used":[4],"as":[5,47,77],"basic":[6],"information":[7,16],"to":[8,97,109],"diagnose":[9],"diseases.":[10],"However,":[11],"this":[12,26,54,131],"kind":[13],"of":[14,68,80],"medical":[15],"is":[17,75,82],"usually":[18],"written":[19],"in":[20,103,141],"a":[21,87],"natural":[22],"language.":[23],"To":[24,52],"find":[25,38,98],"information,":[27],"lexicon":[28],"based":[29,90],"methods":[30],"have":[31,43],"been":[32],"good":[33],"solutions":[34],"but":[35],"they":[36],"cannot":[37],"terms":[39,81,102,119],"that":[40,49,130],"do":[41],"not":[42],"abbreviated":[44,99],"expressions,":[45],"such":[46],"\"neuts\"":[48],"means":[50],"\"neutrophils\".":[51],"address":[53],"issue,":[55],"similar":[56],"word":[57],"matching":[58],"can":[59,64,133],"be":[60,65],"used;":[61],"however,":[62],"it":[63],"disadvantageous":[66],"because":[67],"significant":[69],"false":[70],"positives.":[71],"Moreover,":[72],"processing":[73,125],"time":[74],"longer":[76],"the":[78,107,111,118,121],"size":[79],"bigger.":[83],"Therefore,":[84],"we":[85,116],"suggest":[86],"novel":[88],"q-gram":[89],"algorithm,":[91],"named":[92],"modified":[93],"triangular":[94],"area":[95],"filtering,":[96],"laboratory":[100],"clinical":[104],"documents,":[105],"minimizing":[106],"possibility":[108],"impair":[110],"lexicons'":[112],"precision.":[113],"In":[114],"addition,":[115],"found":[117],"using":[120],"methodology":[122],"with":[123],"reasonable":[124],"time.":[126],"The":[127],"results":[128],"show":[129],"method":[132],"achieve":[134],"92.54":[135],"precision,":[136],"87.72":[137],"recall,":[138],"90.06":[139],"f1-score":[140],"sets":[143],"when":[144],"edit":[145],"distance":[146],"threshold(\u03c4)":[147],"=":[148],"3.":[149]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
