{"id":"https://openalex.org/W2741118628","doi":"https://doi.org/10.3233/978-1-61499-781-8-15","title":"Pitfalls of Ontology in Medicine","display_name":"Pitfalls of Ontology in Medicine","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2741118628","doi":"https://doi.org/10.3233/978-1-61499-781-8-15","mag":"2741118628","pmid":"https://pubmed.ncbi.nlm.nih.gov/28679876"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-781-8-15","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-781-8-15","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Aldosari Bakheet","orcid":null},"institutions":[{"id":"https://openalex.org/I185203018","display_name":"King Saud bin Abdulaziz University for Health Sciences","ror":"https://ror.org/0149jvn88","country_code":"SA","type":"education","lineage":["https://openalex.org/I185203018"]}],"countries":["SA"],"is_corresponding":true,"raw_author_name":"Aldosari Bakheet","raw_affiliation_strings":["Department of Health Informatics, College of Public Health & Health Informatics, King Saud Bin Abdul-Aziz University for Health Sciences, Riyadh, Saudi Arabia"],"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, College of Public Health & Health Informatics, King Saud Bin Abdul-Aziz University for Health Sciences, Riyadh, Saudi Arabia","institution_ids":["https://openalex.org/I185203018"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Alanazi Abdullah","orcid":null},"institutions":[{"id":"https://openalex.org/I185203018","display_name":"King Saud bin Abdulaziz University for Health Sciences","ror":"https://ror.org/0149jvn88","country_code":"SA","type":"education","lineage":["https://openalex.org/I185203018"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Alanazi Abdullah","raw_affiliation_strings":["Department of Health Informatics, College of Public Health & Health Informatics, King Saud Bin Abdul-Aziz University for Health Sciences, Riyadh, Saudi Arabia"],"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, College of Public Health & Health Informatics, King Saud Bin Abdul-Aziz University for Health Sciences, Riyadh, Saudi Arabia","institution_ids":["https://openalex.org/I185203018"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057926319","display_name":"Mowafa Househ","orcid":null},"institutions":[{"id":"https://openalex.org/I185203018","display_name":"King Saud bin Abdulaziz University for Health Sciences","ror":"https://ror.org/0149jvn88","country_code":"SA","type":"education","lineage":["https://openalex.org/I185203018"]}],"countries":["SA"],"is_corresponding":false,"raw_author_name":"Househ Mowafa","raw_affiliation_strings":["Department of Health Informatics, College of Public Health & Health Informatics, King Saud Bin Abdul-Aziz University for Health Sciences, Riyadh, Saudi Arabia"],"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, College of Public Health & Health Informatics, King Saud Bin Abdul-Aziz University for Health Sciences, Riyadh, Saudi Arabia","institution_ids":["https://openalex.org/I185203018"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I185203018"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.10468146,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"238","issue":null,"first_page":"15","last_page":"18"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.9445000290870667,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.8463238477706909},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6803771257400513},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.6072433590888977},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5749003887176514},{"id":"https://openalex.org/keywords/hierarchy","display_name":"Hierarchy","score":0.5697806477546692},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.5449702739715576},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.525244951248169},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.3683156371116638},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3508739471435547},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.21370148658752441},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.18506300449371338},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.17329159379005432}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.8463238477706909},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6803771257400513},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.6072433590888977},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5749003887176514},{"id":"https://openalex.org/C31170391","wikidata":"https://www.wikidata.org/wiki/Q188619","display_name":"Hierarchy","level":2,"score":0.5697806477546692},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.5449702739715576},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.525244951248169},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.3683156371116638},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3508739471435547},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.21370148658752441},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.18506300449371338},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.17329159379005432},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C34447519","wikidata":"https://www.wikidata.org/wiki/Q179522","display_name":"Market economy","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001690","descriptor_name":"Biological Science Disciplines","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007256","descriptor_name":"Information Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007256","descriptor_name":"Information Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007256","descriptor_name":"Information Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-781-8-15","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-781-8-15","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:28679876","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28679876","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"No poverty","score":0.5600000023841858,"id":"https://metadata.un.org/sdg/1"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1506177826","https://openalex.org/W2127299687","https://openalex.org/W2726617685","https://openalex.org/W2159818280","https://openalex.org/W1794266373","https://openalex.org/W22148886","https://openalex.org/W4255991504","https://openalex.org/W2111194626","https://openalex.org/W3135477004","https://openalex.org/W2074013882"],"abstract_inverted_index":{"Much":[0],"research":[1,201],"has":[2],"been":[3],"done":[4],"in":[5,10,22,49,81,93,114,156,194,204,210],"the":[6,23,36,50,55,61,67,85,109,115,139,158,164,174,211,219],"last":[7],"few":[8],"decades":[9],"clinical":[11],"research,":[12],"medicine,":[13,53],"life":[14],"sciences,":[15],"etc.":[16],"leading":[17],"to":[18,42,99,131,162],"an":[19],"exponential":[20],"increase":[21],"generation":[24],"of":[25,35,52,57,69,112,117,143,177,213,221],"data.":[26],"Managing":[27],"this":[28,105,147],"vast":[29],"information":[30],"not":[31,172,185],"only":[32,186],"requires":[33],"integration":[34],"data,":[37],"but":[38,189],"also":[39,190],"a":[40,77,96,128],"means":[41],"analyze,":[43],"relate,":[44],"and":[45,60,166,208],"retrieve":[46],"it.":[47],"Ontology,":[48],"field":[51,116,220],"describes":[54],"concepts":[56],"medical":[58,70,133,144],"terminologies":[59],"relation":[62],"between":[63],"them,":[64],"thus,":[65],"enabling":[66],"sharing":[68],"knowledge.":[71],"Ontology-based":[72],"analyses":[73],"are":[74,125,184,191],"associated":[75],"with":[76,179],"risk":[78],"that":[79,123],"errors":[80],"modeling":[82],"may":[83,149,171],"deteriorate":[84],"results'":[86],"quality.":[87],"Identifying":[88],"flawed":[89],"practices":[90,207],"or":[91],"anomalies":[92,209],"ontologies":[94,124,214],"is":[95,202],"crucial":[97],"issue":[98],"be":[100,150],"addressed":[101],"by":[102,215],"researchers.":[103],"In":[104,198],"paper,":[106],"we":[107],"review":[108],"negative":[110],"sides":[111],"ontology":[113],"medicine.":[118,222],"Our":[119],"study":[120],"results":[121],"show":[122],"perceived":[126],"as":[127],"mere":[129],"tool":[130],"represent":[132],"knowledge,":[134],"thus":[135],"relying":[136],"more":[137,200],"on":[138],"computer":[140,216],"science-based":[141],"understanding":[142],"terms.":[145],"While":[146],"approach":[148],"sufficient":[151],"for":[152],"data":[153],"entry":[154],"systems,":[155],"which":[157,183],"users":[159],"merely":[160],"need":[161],"browse":[163],"hierarchy":[165],"select":[167],"relevant":[168],"terms,":[169],"it":[170],"suffice":[173],"real-world":[175],"scenario":[176],"dealing":[178],"complex":[180],"patient":[181],"records,":[182],"grammatically":[187],"complex,":[188],"sometimes":[192],"documented":[193],"many":[195],"native":[196],"languages.":[197],"conclusion,":[199],"required":[203],"identifying":[205],"poor":[206],"development":[212],"scientists":[217],"within":[218]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}
