{"id":"https://openalex.org/W2536039441","doi":"https://doi.org/10.3233/978-1-61499-678-1-322","title":"Transcription of Case Report Forms from Unstructured Referral Letters: A Semantic Text Analytics Approach","display_name":"Transcription of Case Report Forms from Unstructured Referral Letters: A Semantic Text Analytics Approach","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2536039441","doi":"https://doi.org/10.3233/978-1-61499-678-1-322","mag":"2536039441","pmid":"https://pubmed.ncbi.nlm.nih.gov/27577396"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-678-1-322","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-678-1-322","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Abidi Syed Sibte Raza","orcid":null},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Abidi Syed Sibte Raza","raw_affiliation_strings":["NICHE Research Lab, Faculty of Computer Science, Dalhousie University, Halifax, Canada"],"affiliations":[{"raw_affiliation_string":"NICHE Research Lab, Faculty of Computer Science, Dalhousie University, Halifax, Canada","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038586780","display_name":"Vijay Kumar","orcid":"https://orcid.org/0000-0003-0170-757X"},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Singh Abhinav Kumar","raw_affiliation_strings":["NICHE Research Lab, Faculty of Computer Science, Dalhousie University, Halifax, Canada"],"affiliations":[{"raw_affiliation_string":"NICHE Research Lab, Faculty of Computer Science, Dalhousie University, Halifax, Canada","institution_ids":["https://openalex.org/I129902397"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006758861","display_name":"Sean Christie","orcid":"https://orcid.org/0000-0002-3540-6022"},"institutions":[{"id":"https://openalex.org/I129902397","display_name":"Dalhousie University","ror":"https://ror.org/01e6qks80","country_code":"CA","type":"education","lineage":["https://openalex.org/I129902397"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Christie Sean","raw_affiliation_strings":["Division of Neurosurgery, Dalhousie University, Halifax, Canada"],"affiliations":[{"raw_affiliation_string":"Division of Neurosurgery, Dalhousie University, Halifax, Canada","institution_ids":["https://openalex.org/I129902397"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I129902397"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.18613809,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"228","issue":null,"first_page":"322","last_page":"6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12664","display_name":"Clinical practice guidelines implementation","score":0.9557999968528748,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12918","display_name":"Healthcare Systems and Technology","score":0.9546999931335449,"subfield":{"id":"https://openalex.org/subfields/1407","display_name":"Organizational Behavior and Human Resource Management"},"field":{"id":"https://openalex.org/fields/14","display_name":"Business, Management and Accounting"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/referral","display_name":"Referral","score":0.8666442036628723},{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.7273865938186646},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6835651397705078},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5973163843154907},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5043836832046509},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.44885584712028503},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4464702010154724},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3408138155937195},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.31153279542922974},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.27939164638519287},{"id":"https://openalex.org/keywords/family-medicine","display_name":"Family medicine","score":0.21721604466438293},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.2117871642112732},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.16157278418540955}],"concepts":[{"id":"https://openalex.org/C2776135927","wikidata":"https://www.wikidata.org/wiki/Q5242559","display_name":"Referral","level":2,"score":0.8666442036628723},{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.7273865938186646},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6835651397705078},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5973163843154907},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5043836832046509},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.44885584712028503},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4464702010154724},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3408138155937195},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.31153279542922974},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.27939164638519287},{"id":"https://openalex.org/C512399662","wikidata":"https://www.wikidata.org/wiki/Q3505712","display_name":"Family medicine","level":1,"score":0.21721604466438293},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.2117871642112732},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.16157278418540955},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001330","descriptor_name":"Electronic Data Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001330","descriptor_name":"Electronic Data Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001330","descriptor_name":"Electronic Data Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012017","descriptor_name":"Referral and Consultation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012017","descriptor_name":"Referral and Consultation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012017","descriptor_name":"Referral and Consultation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015709","descriptor_name":"Correspondence as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015709","descriptor_name":"Correspondence as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015709","descriptor_name":"Correspondence as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-678-1-322","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-678-1-322","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:27577396","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27577396","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2039735462","https://openalex.org/W4297803142","https://openalex.org/W2951665393","https://openalex.org/W2770499767","https://openalex.org/W2295806952","https://openalex.org/W2293521960","https://openalex.org/W172101468","https://openalex.org/W131864321","https://openalex.org/W4237480647","https://openalex.org/W2497538197"],"abstract_inverted_index":{"In":[0],"this":[1],"paper":[2],"we":[3],"present":[4],"a":[5,22,53,68,102],"framework":[6,27],"for":[7],"the":[8,29,34,38,59,63],"semi-automatic":[9],"extraction":[10],"of":[11,110],"medical":[12,35],"entities":[13],"from":[14,37,62],"referral":[15,40,64,81,89,99],"letters":[16],"and":[17,50,83,91,101],"use":[18],"them":[19,44],"to":[20,46,78,84],"transcribe":[21,52],"case":[23,54,104],"report":[24,55,105],"form.":[25],"Our":[26],"offers":[28],"functionality":[30],"to:":[31],"(a)":[32],"extract":[33],"entity":[36],"unstructured":[39],"letters,":[41,100],"(b)":[42],"classify":[43,80],"according":[45],"their":[47],"semantic":[48,69,86],"type,":[49],"(c)":[51],"form":[56,106],"based":[57],"on":[58],"extracted":[60],"information":[61],"letter.":[65],"We":[66,94],"take":[67],"text":[70],"analytics":[71],"approach":[72],"where":[73],"SNOMED-CT":[74],"ontology":[75],"is":[76],"used":[77,95,107],"both":[79],"concepts":[82,90],"establish":[85],"similarities":[87],"between":[88],"CRF":[92],"elements.":[93],"100":[96],"spine":[97],"injury":[98],"standard":[103],"by":[108],"Association":[109],"Dalhousie":[111,113],"Neurosurgeons,":[112],"University.":[114]},"counts_by_year":[],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}
