{"id":"https://openalex.org/W2604617624","doi":"https://doi.org/10.3233/978-1-61499-522-7-168","title":"A prediction system for ankyrin repeat domain family","display_name":"A prediction system for ankyrin repeat domain family","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2604617624","doi":"https://doi.org/10.3233/978-1-61499-522-7-168","mag":"2604617624"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-522-7-168","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-522-7-168","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5116359614","display_name":"Wang Teng-Wei","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wang Teng-Wei","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018822709","display_name":"Lo Ying-Tsang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lo Ying-Tsang","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069195823","display_name":"Pai Tun-Wen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pai Tun-Wen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5042597849","display_name":"Hamido Fujita","orcid":"https://orcid.org/0000-0001-5256-210X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Fujita Hamido","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.5176978,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"168","last_page":"178"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10839","display_name":"Pancreatic function and diabetes","score":0.9469000101089478,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10839","display_name":"Pancreatic function and diabetes","score":0.9469000101089478,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ankyrin-repeat","display_name":"Ankyrin repeat","score":0.8497738838195801},{"id":"https://openalex.org/keywords/ankyrin","display_name":"Ankyrin","score":0.7220883965492249},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5447311401367188},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.49918651580810547},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32682618498802185},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18068960309028625},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1787855327129364},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1754755675792694},{"id":"https://openalex.org/keywords/mathematical-analysis","display_name":"Mathematical analysis","score":0.045488566160202026}],"concepts":[{"id":"https://openalex.org/C113241181","wikidata":"https://www.wikidata.org/wiki/Q24784174","display_name":"Ankyrin repeat","level":3,"score":0.8497738838195801},{"id":"https://openalex.org/C182800266","wikidata":"https://www.wikidata.org/wiki/Q414971","display_name":"Ankyrin","level":3,"score":0.7220883965492249},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5447311401367188},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.49918651580810547},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32682618498802185},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18068960309028625},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1787855327129364},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1754755675792694},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.045488566160202026},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-522-7-168","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-522-7-168","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},{"id":"mag:2604617624","is_oa":false,"landing_page_url":"https://dblp.uni-trier.de/db/conf/icsse/icsse2015.html#WangLPF15","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.4399999976158142,"id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W1995972219","https://openalex.org/W2059576907","https://openalex.org/W1516730417","https://openalex.org/W2039884257","https://openalex.org/W2010874410","https://openalex.org/W2092250360","https://openalex.org/W2144218767","https://openalex.org/W4206472390","https://openalex.org/W1985485809","https://openalex.org/W2041952620"],"abstract_inverted_index":{"Ankyrin":[0],"Repeat":[1],"Domain":[2],"(ARD)":[3],"is":[4,45],"an":[5,48,92,124],"alpha-solenoid":[6],"repeat":[7,16,20],"structure":[8,24],"formed":[9],"by":[10],"cascading":[11],"a":[12,23,37,75,115,119,133,141],"series":[13],"of":[14,87,109,117,121,126,143,159],"ankyrin":[15],"units.":[17],"These":[18],"fundamental":[19],"units":[21],"within":[22,91],"possess":[25],"low":[26],"sequence":[27,76],"similarity":[28],"but":[29],"high":[30],"structural":[31,82],"conservation.":[32],"An":[33],"ARD":[34,93,129,146,178],"serves":[35],"as":[36,47],"protein&amp;ndash;protein":[38],"interaction":[39,56,183],"platform":[40],"in":[41,155,174],"nature,":[42],"and":[43,95,123,168],"it":[44],"discovered":[46],"important":[49],"factor":[50],"influencing":[51],"hypoxia":[52],"response":[53],"through":[54,104],"hydroxylation":[55,100],"with":[57,80,140],"Factor":[58],"Inhibiting":[59],"HIF":[60,66],"(FIH)":[61],"enzymes":[62],"which":[63],"can":[64,171],"repress":[65],"under":[67],"normoxia":[68],"environment.":[69],"In":[70,131],"this":[71],"study,":[72],"we":[73],"designed":[74],"based":[77],"method":[78],"incorporated":[79],"secondary":[81],"features":[83],"to":[84],"predict":[85],"boundaries":[86],"all":[88,149],"internal":[89],"repeats":[90],"protein,":[94],"the":[96,110,164],"binding":[97],"positions":[98],"for":[99,128],"were":[101],"also":[102],"identified":[103,145],"pattern":[105],"matching":[106],"approaches.":[107],"Performance":[108],"proposed":[111,165],"prediction":[112,166],"system":[113,137,167],"achieved":[114],"sensitivity":[116],"73.1%,":[118],"specificity":[120],"99.3%,":[122],"accuracy":[125],"94.1%":[127],"recognition.":[130],"addition,":[132],"comprehensive":[134],"web":[135],"database":[136,170],"was":[138],"constructed":[139],"total":[142],"15,322":[144],"candidates":[147],"from":[148],"63":[150],"model":[151],"species":[152],"genomes":[153],"collected":[154],"Ensembl":[156],"(release":[157],"version":[158],"73).":[160],"We":[161],"believe":[162],"that":[163],"developed":[169],"facilitate":[172],"biologists":[173],"further":[175],"exploration":[176],"on":[177],"related":[179],"researches":[180],"regarding":[181],"protein-protein":[182],"mechanisms.":[184]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
