{"id":"https://openalex.org/W2604757610","doi":"https://doi.org/10.3233/978-1-61499-484-8-1950","title":"Transcriptome analysis of Orange-Spotted Grouper between Ranavirus and Megalocytivirus Infections","display_name":"Transcriptome analysis of Orange-Spotted Grouper between Ranavirus and Megalocytivirus Infections","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2604757610","doi":"https://doi.org/10.3233/978-1-61499-484-8-1950","mag":"2604757610"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-484-8-1950","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-484-8-1950","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077115938","display_name":"Cing-Han Yang","orcid":"https://orcid.org/0009-0000-8026-1822"},"institutions":[{"id":"https://openalex.org/I153512688","display_name":"National Taiwan Ocean University","ror":"https://ror.org/03bvvnt49","country_code":"TW","type":"education","lineage":["https://openalex.org/I153512688"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yang Cing-Han","raw_affiliation_strings":["National Taiwan Ocean University, Keelung, Taiwan"],"affiliations":[{"raw_affiliation_string":"National Taiwan Ocean University, Keelung, Taiwan","institution_ids":["https://openalex.org/I153512688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084645089","display_name":"Yu\u2010Cheng Hsiao","orcid":"https://orcid.org/0000-0003-3312-7318"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hsiao Yu-Cheng","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068618830","display_name":"Chien\u2010Ming Chen","orcid":"https://orcid.org/0000-0002-6502-472X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chen Chien-Ming","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086428506","display_name":"Tun\u2010Wen Pai","orcid":"https://orcid.org/0000-0002-2869-4169"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pai Tun-Wen","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009220791","display_name":"Ming-Hung Wu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wu Ming-Hung","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5066741846","display_name":"Hsin\u2010Yiu Chou","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chou Hsin-Yiu","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5077115938"],"corresponding_institution_ids":["https://openalex.org/I153512688"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.36195032,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1950","last_page":"1959"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11668","display_name":"interferon and immune responses","score":0.98089998960495,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9736999869346619,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/iridovirus","display_name":"Iridovirus","score":0.7794297933578491},{"id":"https://openalex.org/keywords/ranavirus","display_name":"Ranavirus","score":0.6321289539337158},{"id":"https://openalex.org/keywords/grouper","display_name":"Grouper","score":0.6087769269943237},{"id":"https://openalex.org/keywords/orange","display_name":"Orange (colour)","score":0.603023111820221},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5968997478485107},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.4145164489746094},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.3577178120613098},{"id":"https://openalex.org/keywords/fishery","display_name":"Fishery","score":0.1488373875617981},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.08147251605987549},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07867047190666199},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.060426801443099976},{"id":"https://openalex.org/keywords/horticulture","display_name":"Horticulture","score":0.058187514543533325},{"id":"https://openalex.org/keywords/fish-actinopterygii","display_name":"Fish <Actinopterygii>","score":0.04897400736808777}],"concepts":[{"id":"https://openalex.org/C2909396630","wikidata":"https://www.wikidata.org/wiki/Q18819341","display_name":"Iridovirus","level":3,"score":0.7794297933578491},{"id":"https://openalex.org/C2780929364","wikidata":"https://www.wikidata.org/wiki/Q3418768","display_name":"Ranavirus","level":3,"score":0.6321289539337158},{"id":"https://openalex.org/C2778967481","wikidata":"https://www.wikidata.org/wiki/Q5559352","display_name":"Grouper","level":3,"score":0.6087769269943237},{"id":"https://openalex.org/C83082669","wikidata":"https://www.wikidata.org/wiki/Q39338","display_name":"Orange (colour)","level":2,"score":0.603023111820221},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5968997478485107},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.4145164489746094},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.3577178120613098},{"id":"https://openalex.org/C505870484","wikidata":"https://www.wikidata.org/wiki/Q180538","display_name":"Fishery","level":1,"score":0.1488373875617981},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.08147251605987549},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07867047190666199},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.060426801443099976},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.058187514543533325},{"id":"https://openalex.org/C2909208804","wikidata":"https://www.wikidata.org/wiki/Q127282","display_name":"Fish <Actinopterygii>","level":2,"score":0.04897400736808777},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-484-8-1950","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-484-8-1950","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},{"id":"mag:2604757610","is_oa":false,"landing_page_url":"https://dblp.uni-trier.de/db/conf/intcompsymp/ics2014.html#YangHCPWC14","pdf_url":null,"source":{"id":"https://openalex.org/S4306419857","display_name":"International Conference on Supercomputing","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"International Conference on Supercomputing","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W327060608","https://openalex.org/W2399546217","https://openalex.org/W2081291666","https://openalex.org/W2943448754","https://openalex.org/W2033845816","https://openalex.org/W2938739662","https://openalex.org/W2972417544","https://openalex.org/W3124373462","https://openalex.org/W2944744218","https://openalex.org/W2529619702"],"abstract_inverted_index":{"Grouper":[0],"is":[1],"an":[2],"important":[3],"aquaculture":[4],"fish":[5,96],"with":[6],"high":[7],"economic":[8],"value":[9],"for":[10,33,75,161],"several":[11],"Asian":[12],"countries.":[13],"However,":[14],"during":[15],"growing":[16],"stages,":[17],"groupers":[18,35],"are":[19,127],"severely":[20],"threatened":[21],"by":[22,37,166],"grouper":[23,92],"iridovirus.":[24,171],"In":[25,61,124],"this":[26],"study,":[27],"we":[28],"applied":[29,74],"next-generation":[30],"sequencing":[31],"technology":[32],"analyzing":[34],"infected":[36,122,148],"two":[38,119,145,167],"different":[39,120,146,164],"iridoviruses":[40],"of":[41,52,69,88,170],"TGIV":[42],"and":[43,67,109,129,134,136,153],"GIV":[44],"at":[45],"a":[46],"transciptomic":[47],"level.":[48],"To":[49],"explore":[50],"significance":[51],"differentially":[53,104,154],"expressed":[54,105,155],"genes,":[55],"standard":[56],"statistical":[57],"analysis":[58],"was":[59],"performed.":[60],"addition,":[62],"both":[63],"gene":[64],"ontology":[65],"(GO)":[66],"cluster":[68],"orthologous":[70],"groups":[71],"(COG)":[72],"were":[73,113,157],"functional":[76],"annotation":[77],"on":[78],"genes.":[79],"From":[80],"the":[81,85,101],"results,":[82],"tilapia":[83],"possessed":[84],"most":[86],"number":[87],"similar":[89],"sequences":[90],"to":[91,163],"than":[93],"all":[94],"other":[95],"model":[97],"species.":[98],"Besides,":[99],"among":[100],"top":[102],"50":[103],"contigs,":[106],"19":[107],"up-regulated":[108,132],"12":[110],"down-regulated":[111,139],"genes":[112,117,133,140,156],"detected":[114],"as":[115,159],"co-expressed":[116],"within":[118,144],"iridovirus":[121,147],"groupers.":[123,149],"contrast,":[125],"there":[126],"15":[128],"20":[130],"exclusively":[131,138],"25":[135],"24":[137],"could":[141],"be":[142],"found":[143],"These":[150],"exclusively,":[151],"significantly,":[152],"considered":[158],"evidences":[160],"leading":[162],"damages":[165],"distinct":[168],"types":[169]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2017-04-14T00:00:00"}
