{"id":"https://openalex.org/W2405068323","doi":"https://doi.org/10.3233/978-1-61499-289-9-984","title":"A Qualitative Model for Physiology: Apart from Function and Abnormality","display_name":"A Qualitative Model for Physiology: Apart from Function and Abnormality","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2405068323","doi":"https://doi.org/10.3233/978-1-61499-289-9-984","mag":"2405068323","pmid":"https://pubmed.ncbi.nlm.nih.gov/23920758"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-289-9-984","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-289-9-984","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023820316","display_name":"Emiko Shinohara","orcid":null},"institutions":[{"id":"https://openalex.org/I4210109338","display_name":"University of Tokyo Hospital","ror":"https://ror.org/022cvpj02","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210109338"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Shinohara Emiko Y.","raw_affiliation_strings":["Department of Planning, Information, and Management, The University of Tokyo Hospital, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"Department of Planning, Information, and Management, The University of Tokyo Hospital, Tokyo, Japan","institution_ids":["https://openalex.org/I4210109338"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032361033","display_name":"Akimichi Tatsukawa","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tatsukawa Akimichi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021892377","display_name":"Yoshimasa Kawazoe","orcid":"https://orcid.org/0000-0002-7277-0827"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kawazoe Yoshimasa","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101780955","display_name":"Takeshi Imai","orcid":"https://orcid.org/0000-0002-8708-079X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Imai Takeshi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5052636056","display_name":"Kazuhiko Ohe","orcid":"https://orcid.org/0000-0002-4296-9536"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ohe Kazuhiko","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5023820316"],"corresponding_institution_ids":["https://openalex.org/I4210109338"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19403615,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"192","issue":null,"first_page":"984","last_page":"984"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7309128642082214},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7187949419021606},{"id":"https://openalex.org/keywords/abnormality","display_name":"Abnormality","score":0.6759799718856812},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6067960858345032},{"id":"https://openalex.org/keywords/granularity","display_name":"Granularity","score":0.5848133563995361},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5227998495101929},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5204358696937561},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.44508928060531616},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3704662322998047},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.325279176235199},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15395769476890564},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09478724002838135},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.09073325991630554},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07657074928283691},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07133188843727112}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7309128642082214},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7187949419021606},{"id":"https://openalex.org/C50965678","wikidata":"https://www.wikidata.org/wiki/Q2724302","display_name":"Abnormality","level":2,"score":0.6759799718856812},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6067960858345032},{"id":"https://openalex.org/C177774035","wikidata":"https://www.wikidata.org/wiki/Q1246948","display_name":"Granularity","level":2,"score":0.5848133563995361},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5227998495101929},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5204358696937561},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.44508928060531616},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3704662322998047},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.325279176235199},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15395769476890564},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09478724002838135},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.09073325991630554},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07657074928283691},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07133188843727112},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010829","descriptor_name":"Physiological Phenomena","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010829","descriptor_name":"Physiological Phenomena","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D010829","descriptor_name":"Physiological Phenomena","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-289-9-984","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-289-9-984","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:23920758","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23920758","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","score":0.7400000095367432,"display_name":"Peace, Justice and strong institutions"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2931688134","https://openalex.org/W2377919138","https://openalex.org/W2378857091","https://openalex.org/W103652678","https://openalex.org/W4226090359","https://openalex.org/W2759030965","https://openalex.org/W1583422155","https://openalex.org/W1649619740","https://openalex.org/W3213252596","https://openalex.org/W2165071883"],"abstract_inverted_index":{"Physiological":[0],"knowledge":[1,78,86],"is":[2,36,87],"often":[3],"described":[4,85],"in":[5,10,101],"terms":[6],"of":[7,13,46,67,89,104,121],"mathematical":[8,81],"models":[9,27,76],"the":[11],"domain":[12],"bioinformatics,":[14],"and":[15,44,64,93,95,127],"some":[16],"ontologies":[17],"have":[18],"been":[19],"developed":[20],"to":[21,48,108],"integrate":[22],"these":[23],"models.":[24],"However,":[25],"such":[26],"do":[28],"not":[29],"explicitly":[30],"describe":[31],"clinicians'":[32],"qualitative":[33,63],"knowledge,":[34],"which":[35,70],"required":[37],"for":[38,61],"clinical":[39,53],"applications":[40],"including":[41],"decision":[42],"support":[43],"counseling":[45],"patients":[47],"help":[49],"them":[50],"understand":[51],"their":[52],"situation.":[54],"This":[55],"paper":[56],"proposes":[57],"a":[58,62,122,130],"description":[59],"framework":[60],"context-independent":[65],"ontology":[66,112],"physiology,":[68],"QliP,":[69],"has":[71],"three":[72],"features:":[73],"1)":[74],"It":[75,97],"physiological":[77,99,123],"qualitatively":[79],"without":[80],"knowledge;":[82],"2)":[83],"The":[84],"independent":[88],"surrounding":[90],"anatomical":[91],"entities":[92],"abnormality;":[94],"3)":[96],"targets":[98],"components":[100],"varying":[102],"degrees":[103],"granularity,":[105],"from":[106],"cells":[107],"organ":[109],"systems.":[110],"An":[111],"based":[113],"on":[114],"this":[115],"proposed":[116],"model":[117],"enables":[118],"automatic":[119],"generation":[120],"state":[124],"transition,":[125],"starting":[126],"ending":[128],"with":[129],"given":[131],"state.":[132]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
