{"id":"https://openalex.org/W2395781445","doi":"https://doi.org/10.3233/978-1-61499-203-5-201","title":"Processing Medical Reports to Automatically Populate Ontologies","display_name":"Processing Medical Reports to Automatically Populate Ontologies","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2395781445","doi":"https://doi.org/10.3233/978-1-61499-203-5-201","mag":"2395781445","pmid":"https://pubmed.ncbi.nlm.nih.gov/23388282"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-203-5-201","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-203-5-201","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013731648","display_name":"Lu\u00eds Miguel Borrego","orcid":"https://orcid.org/0000-0003-4708-438X"},"institutions":[{"id":"https://openalex.org/I21803372","display_name":"University of \u00c9vora","ror":"https://ror.org/02gyps716","country_code":"PT","type":"education","lineage":["https://openalex.org/I21803372"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Borrego Lu&iacute;s","raw_affiliation_strings":["University of \u00c9vora, \u00c9vora, Portugal. pq@uevora.pt"],"affiliations":[{"raw_affiliation_string":"University of \u00c9vora, \u00c9vora, Portugal. pq@uevora.pt","institution_ids":["https://openalex.org/I21803372"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028531406","display_name":"Paulo Quaresma","orcid":"https://orcid.org/0000-0002-5086-059X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Quaresma Paulo","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5013731648"],"corresponding_institution_ids":["https://openalex.org/I21803372"],"apc_list":null,"apc_paid":null,"fwci":0.5667,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.71988512,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"183","issue":null,"first_page":"201","last_page":"5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9929999709129333,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.9262999892234802,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7734570503234863},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4308111369609833},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4218316078186035},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.34424686431884766},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.322121262550354},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.04952618479728699}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7734570503234863},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4308111369609833},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4218316078186035},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.34424686431884766},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.322121262550354},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.04952618479728699},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008498","descriptor_name":"Medical Record Linkage","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008498","descriptor_name":"Medical Record Linkage","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008498","descriptor_name":"Medical Record Linkage","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011174","descriptor_name":"Portugal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011174","descriptor_name":"Portugal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011174","descriptor_name":"Portugal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.3233/978-1-61499-203-5-201","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-203-5-201","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:23388282","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23388282","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","score":0.6100000143051147,"id":"https://metadata.un.org/sdg/16"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Medical":[0],"reports":[1,25,91],"are,":[2],"quite":[3],"often,":[4],"written":[5],"and":[6,30,52,58,61,77],"stored":[7],"in":[8,11,23,70],"computer":[9],"systems":[10],"a":[12,18,47,63,87],"non-structured":[13],"free":[14],"text":[15],"form.":[16],"As":[17],"consequence,":[19],"the":[20,93,97],"information":[21],"contained":[22],"these":[24],"is":[26,32,68],"not":[27,33],"easily":[28],"available":[29],"it":[31,37],"possible":[34],"to":[35,49,86],"take":[36],"into":[38],"account":[39],"by":[40],"medical":[41,54,90],"decision":[42],"support":[43],"systems.":[44],"We":[45],"propose":[46],"methodology":[48,67],"automatically":[50],"process":[51],"analyze":[53],"reports,":[55],"identifying":[56],"concepts":[57],"their":[59],"instances,":[60],"populating":[62],"new":[64],"ontology.":[65],"This":[66],"based":[69],"natural":[71],"language":[72],"processing":[73],"techniques":[74],"using":[75],"linguistic":[76],"statistical":[78],"information.":[79],"The":[80],"proposed":[81],"system":[82],"was":[83],"applied":[84],"successfully":[85],"set":[88],"of":[89,96,99],"from":[92],"Veterinary":[94],"Hospital":[95],"University":[98],"\u00c9vora.":[100]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2025-12-23T23:11:35.936235","created_date":"2025-10-10T00:00:00"}
