{"id":"https://openalex.org/W2397523901","doi":"https://doi.org/10.3233/978-1-61499-101-4-38","title":"Data Definition Ontology for clinical data integration and querying","display_name":"Data Definition Ontology for clinical data integration and querying","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2397523901","doi":"https://doi.org/10.3233/978-1-61499-101-4-38","mag":"2397523901","pmid":"https://pubmed.ncbi.nlm.nih.gov/22874148"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-61499-101-4-38","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-101-4-38","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://archive-ouverte.unige.ch/unige:157952","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Ass&eacute;l&eacute; Kama Ariane","orcid":null},"institutions":[{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Ass&eacute;l&eacute; Kama Ariane","raw_affiliation_strings":["Universit\u00e9 Pierre et Marie Curie, Paris, France. ariane.asselekama@gmail.com"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 Pierre et Marie Curie, Paris, France. ariane.asselekama@gmail.com","institution_ids":["https://openalex.org/I39804081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069993034","display_name":"Audi Primadhanty","orcid":"https://orcid.org/0000-0002-1748-3139"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Primadhanty Audi","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Choquet R&eacute;my","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Choquet R&eacute;my","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042070839","display_name":"Douglas Teodoro","orcid":"https://orcid.org/0000-0001-6238-4503"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Teodoro Douglas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037488031","display_name":"Frank Enders","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Enders Frank","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103220388","display_name":"Catherine Duclos","orcid":"https://orcid.org/0000-0001-8745-378X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Duclos Catherine","raw_affiliation_strings":["Laboratoire d'Informatique M\u00e9dicale et de BIOinformatique"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratoire d'Informatique M\u00e9dicale et de BIOinformatique","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034693908","display_name":"Marie\u2010Christine Jaulent","orcid":"https://orcid.org/0000-0003-4445-7494"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jaulent Marie-Christine","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.5319,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.93935579,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"180","issue":null,"first_page":"38","last_page":"42"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8203738927841187},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.5903207659721375},{"id":"https://openalex.org/keywords/semantic-heterogeneity","display_name":"Semantic heterogeneity","score":0.5851650238037109},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5738446712493896},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5489436388015747},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.4958542287349701},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.49078568816185},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.4875780940055847},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.45506805181503296},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.44660550355911255},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.43785473704338074},{"id":"https://openalex.org/keywords/semantic-interoperability","display_name":"Semantic interoperability","score":0.4343082904815674},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3322274684906006},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.27655601501464844}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8203738927841187},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.5903207659721375},{"id":"https://openalex.org/C2778180026","wikidata":"https://www.wikidata.org/wiki/Q18378163","display_name":"Semantic heterogeneity","level":4,"score":0.5851650238037109},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5738446712493896},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5489436388015747},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.4958542287349701},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.49078568816185},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.4875780940055847},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.45506805181503296},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.44660550355911255},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.43785473704338074},{"id":"https://openalex.org/C192800085","wikidata":"https://www.wikidata.org/wiki/Q5258530","display_name":"Semantic interoperability","level":3,"score":0.4343082904815674},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3322274684906006},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.27655601501464844},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008499","descriptor_name":"Medical Records","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008499","descriptor_name":"Medical Records","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008499","descriptor_name":"Medical Records","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.3233/978-1-61499-101-4-38","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-61499-101-4-38","pdf_url":null,"source":{"id":"https://openalex.org/S4210179765","display_name":"Studies in health technology and informatics","issn_l":"0926-9630","issn":["0926-9630","1879-8365"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in Health Technology and Informatics","raw_type":"book-chapter"},{"id":"pmid:22874148","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22874148","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Studies in health technology and informatics","raw_type":null},{"id":"pmh:oai:unige.ch:aou:unige:157952","is_oa":true,"landing_page_url":"https://archive-ouverte.unige.ch/unige:157952","pdf_url":null,"source":{"id":"https://openalex.org/S4306402259","display_name":"Archive ouverte UNIGE (University of Geneva)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114457229","host_organization_name":"University of Geneva","host_organization_lineage":["https://openalex.org/I114457229"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ISSN: 0926-9630","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-03810537v1","is_oa":false,"landing_page_url":"https://hal.science/hal-03810537","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Studies in Health Technology and Informatics, 2012, 180, pp.38-42","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:unige.ch:aou:unige:157952","is_oa":true,"landing_page_url":"https://archive-ouverte.unige.ch/unige:157952","pdf_url":null,"source":{"id":"https://openalex.org/S4306402259","display_name":"Archive ouverte UNIGE (University of Geneva)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I114457229","host_organization_name":"University of Geneva","host_organization_lineage":["https://openalex.org/I114457229"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"ISSN: 0926-9630","raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.44999998807907104,"id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W198410213","https://openalex.org/W1483820856","https://openalex.org/W1620530708","https://openalex.org/W2146588030","https://openalex.org/W2155273278","https://openalex.org/W2312918109","https://openalex.org/W2415191105"],"related_works":["https://openalex.org/W4307158935","https://openalex.org/W2093993994","https://openalex.org/W2022168551","https://openalex.org/W1976716227","https://openalex.org/W2144482357","https://openalex.org/W2391483258","https://openalex.org/W2038252741","https://openalex.org/W756990636","https://openalex.org/W2080890385","https://openalex.org/W2365954004"],"abstract_inverted_index":{"This":[0,63],"paper":[1],"describes":[2],"an":[3,35],"approach":[4],"to":[5,24,41,56,85],"build":[6],"a":[7,43,51,93],"Data":[8],"Definition":[9],"Ontology":[10],"(DDO)":[11],"in":[12,22,68],"the":[13,48,69,72,89,101,107,110,123,126,129],"context":[14,70],"of":[15,71,100,109,116],"full":[16],"domain":[17],"ontology":[18],"integration":[19],"with":[20],"datasets":[21],"order":[23],"share":[25],"and":[26,59,77,87,119,128],"query":[27],"clinical":[28],"heterogeneous":[29],"data":[30],"repositories.":[31],"We":[32],"have":[33],"adapted":[34],"existing":[36],"semantic":[37,94],"web":[38],"tool":[39],"(D2RQ)":[40],"implement":[42],"process":[44,102],"that":[45,83],"automatically":[46],"generates":[47],"DDO":[49,112,127],"from":[50],"database":[52,117,131],"information":[53],"model,":[54],"thanks":[55],"reverse":[57],"engineering":[58],"schema":[60],"mapping":[61,132],"approaches.":[62],"study":[64],"has":[65],"been":[66],"performed":[67],"DebugIT":[73],"European":[74],"project":[75],"(Detecting":[76],"Eliminating":[78],"Bacteria":[79],"UsinG":[80],"Information":[81],"Technology)":[82],"aims":[84],"control":[86],"monitor":[88],"bacterial":[90],"growth":[91],"via":[92],"interoperability":[95],"platform":[96],"(IP).":[97],"The":[98],"evaluation":[99],"is":[103],"based,":[104],"first,":[105],"on":[106],"accuracy":[108],"produced":[111],"for":[113],"different":[114],"samples":[115],"storage":[118],"second,":[120],"by":[121],"checking":[122],"congruency":[124],"between":[125],"D2RQ":[130],"file.":[133]},"counts_by_year":[{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
