{"id":"https://openalex.org/W2173398136","doi":"https://doi.org/10.3233/978-1-60750-477-1-291","title":"Formal system of interactions on biomedical ontology","display_name":"Formal system of interactions on biomedical ontology","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W2173398136","doi":"https://doi.org/10.3233/978-1-60750-477-1-291","mag":"2173398136"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-60750-477-1-291","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-60750-477-1-291","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009330111","display_name":"Naoko Izumi","orcid":null},"institutions":[{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]},{"id":"https://openalex.org/I36475266","display_name":"Jumonji University","ror":"https://ror.org/03068df82","country_code":"JP","type":"education","lineage":["https://openalex.org/I36475266"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Izumi Naoko","raw_affiliation_strings":["Graduate School of Information Science and Engineering, Tokyo Institute of Technology and Faculty of Social and Information Science, Jumonji University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Information Science and Engineering, Tokyo Institute of Technology and Faculty of Social and Information Science, Jumonji University","institution_ids":["https://openalex.org/I114531698","https://openalex.org/I36475266"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058739699","display_name":"Naoki Yonezaki","orcid":null},"institutions":[{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yonezaki Naoki","raw_affiliation_strings":["Graduate School of Information Science and Engineering, Tokyo Institute of Technology#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Information Science and Engineering, Tokyo Institute of Technology#TAB#","institution_ids":["https://openalex.org/I114531698"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16773529,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9843999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9014999866485596,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6915455460548401},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4804919958114624},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.14453235268592834},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.12034869194030762}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6915455460548401},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4804919958114624},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.14453235268592834},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.12034869194030762}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3233/978-1-60750-477-1-291","is_oa":false,"landing_page_url":"https://doi.org/10.3233/978-1-60750-477-1-291","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.5099999904632568,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W112159558","https://openalex.org/W159715351","https://openalex.org/W1791710463","https://openalex.org/W2001661334","https://openalex.org/W2074231115","https://openalex.org/W2081556416","https://openalex.org/W2093021939","https://openalex.org/W2137865376"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"A":[0],"huge":[1],"amount":[2],"of":[3,30,37,44,61,74,77,91,104,110,119],"interaction":[4,63],"knowledge":[5],"among":[6,34],"biological":[7,62],"materials":[8],"has":[9],"been":[10],"accumulated":[11],"and":[12,39,67,69,101],"it":[13],"is":[14,82],"most":[15],"urgent":[16],"that":[17],"they":[18],"are":[19],"properly":[20],"used":[21],"to":[22,114],"discover":[23],"hidden":[24],"phenomena":[25,118],"in":[26,50,122],"life.":[27],"These":[28],"data":[29],"interactions":[31,92],"describe":[32],"those":[33],"many":[35],"kinds":[36],"objects":[38,96],"reactions":[40,100],"on":[41,102],"different":[42,47],"levels":[43],"life":[45],"or":[46],"time":[48],"scales":[49],"similar":[51],"way.":[52],"In":[53],"this":[54],"paper,":[55],"we":[56],"formalize":[57],"two":[58],"general":[59,89],"concepts":[60,90],"functions":[64],"i.e.":[65],"inhibition":[66],"activation,":[68],"present":[70],"a":[71],"formal":[72,80,112],"system":[73,81,85,113],"the":[75,88,108,111,115],"ontology":[76],"them.":[78],"This":[79],"an":[83],"axiomatic":[84],"which":[86],"represents":[87],"not":[93],"only":[94],"between":[95,99],"but":[97],"also":[98],"pathways":[103],"reactions.":[105],"We":[106],"demonstrate":[107],"applicability":[109],"real":[116],"world":[117],"drugs":[120],"poisoning":[121],"pharmacy.":[123]},"counts_by_year":[],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2016-06-24T00:00:00"}
