{"id":"https://openalex.org/W4407812130","doi":"https://doi.org/10.3233/978-1-58603-891-5-229","title":"Temporal Logic Patterns for Querying Qualitative Models of Genetic Regulatory Networks","display_name":"Temporal Logic Patterns for Querying Qualitative Models of Genetic Regulatory Networks","publication_year":2008,"publication_date":"2008-01-01","ids":{"openalex":"https://openalex.org/W4407812130","doi":"https://doi.org/10.3233/978-1-58603-891-5-229"},"language":"en","primary_location":{"id":"doi:10.3233/978-1-58603-891-5-229","is_oa":true,"landing_page_url":"https://doi.org/10.3233/978-1-58603-891-5-229","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.3233/978-1-58603-891-5-229","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5116363627","display_name":"Monteiro Pedro T.","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Monteiro Pedro T.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116363628","display_name":"Ropers Delphine","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ropers Delphine","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109176610","display_name":"M. Radu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mateescu Radu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5116363629","display_name":"Freitas Ana T.","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Freitas Ana T.","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5116363630","display_name":"de Jong Hidde","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"de Jong Hidde","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.43461475,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9871000051498413,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9535999894142151,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5381814241409302},{"id":"https://openalex.org/keywords/temporal-logic","display_name":"Temporal logic","score":0.4602375030517578},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3926112949848175},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25442665815353394},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.19361117482185364}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5381814241409302},{"id":"https://openalex.org/C25016198","wikidata":"https://www.wikidata.org/wiki/Q781833","display_name":"Temporal logic","level":2,"score":0.4602375030517578},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3926112949848175},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25442665815353394},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.19361117482185364}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3233/978-1-58603-891-5-229","is_oa":true,"landing_page_url":"https://doi.org/10.3233/978-1-58603-891-5-229","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.3233/978-1-58603-891-5-229","is_oa":true,"landing_page_url":"https://doi.org/10.3233/978-1-58603-891-5-229","pdf_url":null,"source":{"id":"https://openalex.org/S4210201731","display_name":"Frontiers in artificial intelligence and applications","issn_l":"0922-6389","issn":["0922-6389","1879-8314"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Frontiers in Artificial Intelligence and Applications","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Formal":[0],"verification":[1],"based":[2],"on":[3],"model":[4,108],"checking":[5],"provides":[6],"a":[7,69,107],"powerful":[8],"technology":[9],"to":[10,31,40,64,88],"query":[11,54],"qualitative":[12,77],"models":[13,78],"of":[14,19,49,71,76,79,97,106,109,112],"dynamical":[15],"systems.":[16],"The":[17,95],"application":[18,93],"model-checking":[20],"approaches":[21],"is":[22],"hampered,":[23],"however,":[24],"by":[25,103],"the":[26,47,74,98,104,110,116],"difficulty":[27],"for":[28,73],"non-expert":[29],"users":[30],"formulate":[32],"appropriate":[33],"questions":[34,58],"in":[35,91,120],"temporal":[36,65],"logic.":[37,66],"In":[38],"order":[39],"deal":[41],"with":[42],"this":[43],"problem,":[44],"we":[45],"propose":[46],"use":[48],"patterns,":[50],"that":[51],"is,":[52],"high-level":[53],"templates":[55],"capturing":[56],"recurring":[57],"which":[59,83],"can":[60],"be":[61,89],"automatically":[62],"translated":[63],"We":[67],"develop":[68],"set":[70],"patterns":[72,99],"analysis":[75,105],"genetic":[80],"regulatory":[81],"networks,":[82],"are":[84],"sufficiently":[85],"generic":[86],"though":[87],"useful":[90],"other":[92],"domains.":[94],"applicability":[96],"has":[100],"been":[101],"investigated":[102],"network":[111],"global":[113],"regulators":[114],"controlling":[115],"carbon":[117],"starvation":[118],"response":[119],"Escherichia":[121],"coli.":[122]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}