{"id":"https://openalex.org/W4321016382","doi":"https://doi.org/10.29007/tpkp","title":"Capabilities of Approaches for Ab Initio Protein Structure Prediction","display_name":"Capabilities of Approaches for Ab Initio Protein Structure Prediction","publication_year":2023,"publication_date":"2023-02-16","ids":{"openalex":"https://openalex.org/W4321016382","doi":"https://doi.org/10.29007/tpkp"},"language":"en","primary_location":{"id":"doi:10.29007/tpkp","is_oa":true,"landing_page_url":"http://dx.doi.org/10.29007/tpkp","pdf_url":"https://easychair.org/publications/open/1qdK","source":{"id":"https://openalex.org/S4220650884","display_name":"Kalpa publications in computing","issn_l":"2515-1762","issn":["2515-1762"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Kalpa Publications in Computing","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://easychair.org/publications/open/1qdK","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021799631","display_name":"Juan Luis Filgueiras","orcid":null},"institutions":[{"id":"https://openalex.org/I4210112307","display_name":"Fundaci\u00f3n Centro Tecnol\u00f3gico de la Informaci\u00f3n y la Comunicaci\u00f3n","ror":"https://ror.org/01whh8488","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I4210112307"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Luis Filgueiras","raw_affiliation_strings":["CITIC (Centre for Information and Communications Technology Research) , Department of Computer Science and Information Technologies , University (Spain)","CITIC (Centre for Information and Communications Technology Research), Department of Computer Science and Information Technologies, University (Spain)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CITIC (Centre for Information and Communications Technology Research) , Department of Computer Science and Information Technologies , University (Spain)","institution_ids":["https://openalex.org/I4210112307"]},{"raw_affiliation_string":"CITIC (Centre for Information and Communications Technology Research), Department of Computer Science and Information Technologies, University (Spain)","institution_ids":["https://openalex.org/I4210112307"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068217114","display_name":"Jos\u00e9 Luis Santos","orcid":"https://orcid.org/0000-0003-2895-0369"},"institutions":[{"id":"https://openalex.org/I4210112307","display_name":"Fundaci\u00f3n Centro Tecnol\u00f3gico de la Informaci\u00f3n y la Comunicaci\u00f3n","ror":"https://ror.org/01whh8488","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I4210112307"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Santos","raw_affiliation_strings":["CITIC (Centre for Information and Communications Technology Research) , Department of Computer Science and Information Technologies , University (Spain)","CITIC (Centre for Information and Communications Technology Research), Department of Computer Science and Information Technologies, University (Spain)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CITIC (Centre for Information and Communications Technology Research) , Department of Computer Science and Information Technologies , University (Spain)","institution_ids":["https://openalex.org/I4210112307"]},{"raw_affiliation_string":"CITIC (Centre for Information and Communications Technology Research), Department of Computer Science and Information Technologies, University (Spain)","institution_ids":["https://openalex.org/I4210112307"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4210112307"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":"14","issue":null,"first_page":"21","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9793000221252441,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9793000221252441,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9013000130653381,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.7805849313735962},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6558773517608643},{"id":"https://openalex.org/keywords/ab-initio","display_name":"Ab initio","score":0.6047531962394714},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5035547614097595},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4808852970600128},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.4008691608905792},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.16724959015846252}],"concepts":[{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.7805849313735962},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6558773517608643},{"id":"https://openalex.org/C2781442258","wikidata":"https://www.wikidata.org/wiki/Q46310","display_name":"Ab initio","level":2,"score":0.6047531962394714},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5035547614097595},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4808852970600128},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.4008691608905792},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.16724959015846252},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.29007/tpkp","is_oa":true,"landing_page_url":"http://dx.doi.org/10.29007/tpkp","pdf_url":"https://easychair.org/publications/open/1qdK","source":{"id":"https://openalex.org/S4220650884","display_name":"Kalpa publications in computing","issn_l":"2515-1762","issn":["2515-1762"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Kalpa Publications in Computing","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.29007/tpkp","is_oa":true,"landing_page_url":"http://dx.doi.org/10.29007/tpkp","pdf_url":"https://easychair.org/publications/open/1qdK","source":{"id":"https://openalex.org/S4220650884","display_name":"Kalpa publications in computing","issn_l":"2515-1762","issn":["2515-1762"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Kalpa Publications in Computing","raw_type":"proceedings-article"},"sustainable_development_goals":[{"score":0.6600000262260437,"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G178263929","display_name":null,"funder_award_id":"ED431B","funder_id":"https://openalex.org/F4320326633","funder_display_name":"Axencia Galega de Innovaci\u00f3n"},{"id":"https://openalex.org/G1885417913","display_name":null,"funder_award_id":"GPC ED431B 2022/33","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G1933851018","display_name":null,"funder_award_id":"ED431G 2019/01","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G2979118188","display_name":null,"funder_award_id":"PID2020-116201GB-I00","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G3199046289","display_name":null,"funder_award_id":"ED431G 2019/01","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3876637791","display_name":null,"funder_award_id":"ED431G","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G5634946813","display_name":null,"funder_award_id":"2014-2020","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G5805502524","display_name":null,"funder_award_id":"PID2020","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G605903649","display_name":null,"funder_award_id":"ED431G 2019/01","funder_id":"https://openalex.org/F4320326633","funder_display_name":"Axencia Galega de Innovaci\u00f3n"},{"id":"https://openalex.org/G6258374248","display_name":null,"funder_award_id":"ED431B","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"},{"id":"https://openalex.org/G6589649124","display_name":null,"funder_award_id":"PID2020-","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G6870533126","display_name":null,"funder_award_id":"2014-2020","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G726424357","display_name":null,"funder_award_id":"ED431G 2019/01","funder_id":"https://openalex.org/F4320326655","funder_display_name":"Xunta de Galicia"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320326633","display_name":"Axencia Galega de Innovaci\u00f3n","ror":"https://ror.org/02vcxyt85"},{"id":"https://openalex.org/F4320326655","display_name":"Xunta de Galicia","ror":"https://ror.org/0181xnw06"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4321016382.pdf","grobid_xml":"https://content.openalex.org/works/W4321016382.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W1879678483","https://openalex.org/W2999044305","https://openalex.org/W3084856361","https://openalex.org/W3186179742","https://openalex.org/W4220887157","https://openalex.org/W4285169958","https://openalex.org/W4296060337","https://openalex.org/W6819451924"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W3209574120","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W2058542300"],"abstract_inverted_index":{"This":[0],"paper":[1],"presents":[2],"a":[3],"discussion":[4],"of":[5,16,29],"alternatives":[6,18],"for":[7],"protein":[8,30,34],"structure":[9],"prediction,":[10],"showing":[11],"the":[12,39],"advantages":[13],"and":[14,23],"problems":[15],"recent":[17],"based":[19,25],"on":[20,26],"deep":[21],"learning":[22],"approaches":[24],"energy":[27],"optimization":[28],"solutions.":[31],"A":[32],"SARS-CoV-2":[33],"is":[35],"included":[36],"to":[37],"exemplify":[38],"results.":[40]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
