{"id":"https://openalex.org/W4405022495","doi":"https://doi.org/10.26599/bdma.2024.9020059","title":"Exploring Trial-and-Error in Deep Learning: Initial Application to Isotope Detection in Mass Spectrometry","display_name":"Exploring Trial-and-Error in Deep Learning: Initial Application to Isotope Detection in Mass Spectrometry","publication_year":2024,"publication_date":"2024-12-01","ids":{"openalex":"https://openalex.org/W4405022495","doi":"https://doi.org/10.26599/bdma.2024.9020059"},"language":"en","primary_location":{"id":"doi:10.26599/bdma.2024.9020059","is_oa":true,"landing_page_url":"https://doi.org/10.26599/bdma.2024.9020059","pdf_url":null,"source":{"id":"https://openalex.org/S4210209060","display_name":"Big Data Mining and Analytics","issn_l":"2096-0654","issn":["2096-0654"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311901","host_organization_name":"Tsinghua University Press","host_organization_lineage":["https://openalex.org/P4310311901"],"host_organization_lineage_names":["Tsinghua University Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big Data Mining and Analytics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.26599/bdma.2024.9020059","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010616947","display_name":"Qihong Jiao","orcid":null},"institutions":[{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qihong Jiao","raw_affiliation_strings":["School of Computer Science and Technology, Shandong University,Qingdao,China,266237"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Shandong University,Qingdao,China,266237","institution_ids":["https://openalex.org/I80143920"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100721978","display_name":"Yuxiao Wang","orcid":"https://orcid.org/0009-0001-7359-5231"},"institutions":[{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxiao Wang","raw_affiliation_strings":["School of Computer Science and Technology, Shandong University,Qingdao,China,266237"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Shandong University,Qingdao,China,266237","institution_ids":["https://openalex.org/I80143920"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013431919","display_name":"Yongshuai Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongshuai Wang","raw_affiliation_strings":["School of Computer Science and Technology, Shandong University,Qingdao,China,266237"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Shandong University,Qingdao,China,266237","institution_ids":["https://openalex.org/I80143920"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108903761","display_name":"Shiwei Sun","orcid":"https://orcid.org/0000-0002-0351-3720"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"funder","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210090176","display_name":"Institute of Computing Technology","ror":"https://ror.org/0090r4d87","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210090176"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shiwei Sun","raw_affiliation_strings":["Institute of Computing Technology, Chinese Academy of Sciences,Key Lab of Intelligent Information Processing,Beijing,China,100190"],"affiliations":[{"raw_affiliation_string":"Institute of Computing Technology, Chinese Academy of Sciences,Key Lab of Intelligent Information Processing,Beijing,China,100190","institution_ids":["https://openalex.org/I4210090176","https://openalex.org/I19820366"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101906222","display_name":"Xuefeng Cui","orcid":"https://orcid.org/0000-0002-8816-3482"},"institutions":[{"id":"https://openalex.org/I80143920","display_name":"Shandong University of Science and Technology","ror":"https://ror.org/04gtjhw98","country_code":"CN","type":"education","lineage":["https://openalex.org/I80143920"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuefeng Cui","raw_affiliation_strings":["School of Computer Science and Technology, Shandong University,Qingdao,China,266237"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Shandong University,Qingdao,China,266237","institution_ids":["https://openalex.org/I80143920"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5010616947"],"corresponding_institution_ids":["https://openalex.org/I80143920"],"apc_list":null,"apc_paid":null,"fwci":0.6459,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.72894334,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"7","issue":"4","first_page":"1251","last_page":"1261"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11949","display_name":"Nuclear Physics and Applications","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11949","display_name":"Nuclear Physics and Applications","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11667","display_name":"Advanced Chemical Sensor Technologies","score":0.9527000188827515,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12073","display_name":"Isotope Analysis in Ecology","score":0.9495999813079834,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.5957440733909607},{"id":"https://openalex.org/keywords/isotope","display_name":"Isotope","score":0.4668598473072052},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3745684027671814},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.2671603560447693},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.21024057269096375},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.12281191349029541},{"id":"https://openalex.org/keywords/nuclear-physics","display_name":"Nuclear physics","score":0.08812388777732849}],"concepts":[{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.5957440733909607},{"id":"https://openalex.org/C164304813","wikidata":"https://www.wikidata.org/wiki/Q25276","display_name":"Isotope","level":2,"score":0.4668598473072052},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3745684027671814},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.2671603560447693},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.21024057269096375},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.12281191349029541},{"id":"https://openalex.org/C185544564","wikidata":"https://www.wikidata.org/wiki/Q81197","display_name":"Nuclear physics","level":1,"score":0.08812388777732849}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.26599/bdma.2024.9020059","is_oa":true,"landing_page_url":"https://doi.org/10.26599/bdma.2024.9020059","pdf_url":null,"source":{"id":"https://openalex.org/S4210209060","display_name":"Big Data Mining and Analytics","issn_l":"2096-0654","issn":["2096-0654"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311901","host_organization_name":"Tsinghua University Press","host_organization_lineage":["https://openalex.org/P4310311901"],"host_organization_lineage_names":["Tsinghua University Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big Data Mining and Analytics","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:41e31f63e0b74fa8bbb31ac3433d7c0f","is_oa":true,"landing_page_url":"https://doaj.org/article/41e31f63e0b74fa8bbb31ac3433d7c0f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Big Data Mining and Analytics, Vol 7, Iss 4, Pp 1251-1261 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.26599/bdma.2024.9020059","is_oa":true,"landing_page_url":"https://doi.org/10.26599/bdma.2024.9020059","pdf_url":null,"source":{"id":"https://openalex.org/S4210209060","display_name":"Big Data Mining and Analytics","issn_l":"2096-0654","issn":["2096-0654"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311901","host_organization_name":"Tsinghua University Press","host_organization_lineage":["https://openalex.org/P4310311901"],"host_organization_lineage_names":["Tsinghua University Press"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big Data Mining and Analytics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6229644023","display_name":null,"funder_award_id":"62072283,62072435","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1971887998","https://openalex.org/W1974845486","https://openalex.org/W1977387007","https://openalex.org/W1981593008","https://openalex.org/W2052388444","https://openalex.org/W2080752012","https://openalex.org/W2081465448","https://openalex.org/W2091375086","https://openalex.org/W2112796928","https://openalex.org/W2118370053","https://openalex.org/W2128084896","https://openalex.org/W2131878480","https://openalex.org/W2168590651","https://openalex.org/W2404881327","https://openalex.org/W2560609797","https://openalex.org/W2571561819","https://openalex.org/W2589840185","https://openalex.org/W2618261049","https://openalex.org/W2724889495","https://openalex.org/W2742206398","https://openalex.org/W2752796333","https://openalex.org/W2803975522","https://openalex.org/W2955058313","https://openalex.org/W2990072002","https://openalex.org/W3167933346","https://openalex.org/W3199268518","https://openalex.org/W4376959490","https://openalex.org/W6640963894","https://openalex.org/W6729448088","https://openalex.org/W6757817989"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"Mass":[0],"spectrometry":[1],"plays":[2],"a":[3,23,50,128,145],"crucial":[4],"role":[5],"in":[6,32],"biomedicine":[7],"by":[8,158],"detecting":[9],"isotopes,":[10,150],"contributing":[11],"significantly":[12],"to":[13,28,42,83,139],"research,":[14],"diagnostics,":[15],"and":[16,45,61],"therapy":[17],"development.":[18],"This":[19],"study":[20],"introduces":[21],"IsoFusion,":[22],"deep":[24],"learning":[25,114],"model":[26,107],"designed":[27],"address":[29],"isotope":[30,93],"detection":[31,147],"raw":[33],"mass":[34],"spectra.":[35],"Rather":[36],"than":[37],"directly":[38],"applying":[39],"convolutional":[40,73],"layers":[41,74],"all":[43,56,110],"signal":[44,63],"noise":[46],"peaks,":[47],"IsoFusion":[48,104,143],"employs":[49],"trial-and-error":[51],"strategy.":[52],"First,":[53],"it":[54],"investigates":[55],"potential":[57],"charge":[58,118,133],"states":[59,119],"(trials)":[60],"collects":[62],"peaks":[64],"around":[65],"expected":[66],"m/z":[67],"values":[68],"for":[69,115,132,149],"each":[70,78],"trial.":[71,99],"Then,":[72],"extract":[75],"features":[76,94],"from":[77,122],"trial,":[79],"which":[80],"are":[81],"fused":[82],"identify":[84],"the":[85,89],"correct":[86,98],"one.":[87],"Finally,":[88],"reparameterization":[90],"trick":[91],"predicts":[92],"based":[95],"on":[96],"this":[97],"A":[100],"key":[101],"advantage":[102],"of":[103,153],"is":[105],"shared":[106],"parameters":[108],"across":[109],"trials,":[111],"enhancing":[112],"feature":[113],"less":[116],"common":[117],"using":[120],"data":[121],"prevalent":[123],"ones.":[124],"Our":[125],"results":[126],"show":[127],"significant":[129],"accuracy":[130,148],"improvement":[131],"state":[134],"5,":[135],"reaching":[136],"99.42%,":[137],"compared":[138],"DeepIso's":[140],"43.36%.":[141],"Moreover,":[142],"achieves":[144],"97.33%":[146],"with":[151],"2.4%":[152],"detected":[154],"isotopes":[155],"previously":[156],"unidentified":[157],"four":[159],"commonly":[160],"used":[161],"methods.":[162]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
