{"id":"https://openalex.org/W2397624327","doi":"https://doi.org/10.25596/jalc-2005-577","title":"The Transformation Distance Problem Revisited","display_name":"The Transformation Distance Problem Revisited","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2397624327","doi":"https://doi.org/10.25596/jalc-2005-577","mag":"2397624327"},"language":"en","primary_location":{"id":"doi:10.25596/jalc-2005-577","is_oa":true,"landing_page_url":"https://doi.org/10.25596/jalc-2005-577","pdf_url":null,"source":{"id":"https://openalex.org/S62907800","display_name":"Journal of automata, languages and combinatorics","issn_l":"1430-189X","issn":["1430-189X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310313929","host_organization_name":"University of Giessen","host_organization_lineage":["https://openalex.org/P4310313929"],"host_organization_lineage_names":["University of Giessen"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"type":"article","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://doi.org/10.25596/jalc-2005-577","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082210829","display_name":"Behshad Behzadi","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Behzadi, Behshad","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5103801575","display_name":"Jean\u2010Marc Steyaert","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Steyaert, Jean-Marc","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.45152215,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"9"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12288","display_name":"Optimization and Search Problems","score":0.878600001335144,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12288","display_name":"Optimization and Search Problems","score":0.878600001335144,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11106","display_name":"Data Management and Algorithms","score":0.8590999841690063,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.815500020980835,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.6185288429260254},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5574079751968384}],"concepts":[{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.6185288429260254},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5574079751968384},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.25596/jalc-2005-577","is_oa":true,"landing_page_url":"https://doi.org/10.25596/jalc-2005-577","pdf_url":null,"source":{"id":"https://openalex.org/S62907800","display_name":"Journal of automata, languages and combinatorics","issn_l":"1430-189X","issn":["1430-189X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310313929","host_organization_name":"University of Giessen","host_organization_lineage":["https://openalex.org/P4310313929"],"host_organization_lineage_names":["University of Giessen"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"},{"id":"mag:2397624327","is_oa":false,"landing_page_url":"http://www.stringology.org/event/2003/p1.html","pdf_url":null,"source":{"id":"https://openalex.org/S4306420724","display_name":"Prague Stringology Conference","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"Prague Stringology Conference","raw_type":null}],"best_oa_location":{"id":"doi:10.25596/jalc-2005-577","is_oa":true,"landing_page_url":"https://doi.org/10.25596/jalc-2005-577","pdf_url":null,"source":{"id":"https://openalex.org/S62907800","display_name":"Journal of automata, languages and combinatorics","issn_l":"1430-189X","issn":["1430-189X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310313929","host_organization_name":"University of Giessen","host_organization_lineage":["https://openalex.org/P4310313929"],"host_organization_lineage_names":["University of Giessen"],"type":"journal"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.46000000834465027,"display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W56862299","https://openalex.org/W2014842528"],"abstract_inverted_index":{"Evolution":[0],"acts":[1],"in":[2,35,63,67,99,103,122,126],"several":[3],"ways":[4],"on":[5],"biological":[6],"sequences:":[7],"either":[8],"by":[9,14,111],"mutating":[10],"an":[11,52,93,117],"element,":[12],"or":[13,17],"inserting,":[15],"deleting":[16],"copying":[18],"a":[19,29,47],"segment":[20],"of":[21,46,81,85],"the":[22,33,37,56,72,79,82,86,108],"sequence.":[23],"Varr{\\'{e}}":[24],"et":[25],"al.":[26],"[13]":[27],"defined":[28],"transformation":[30,57],"distance":[31],"for":[32,128],"sequences,":[34],"which":[36,96,119],"evolutionary":[38],"operations":[39],"are":[40],"copy,":[41],"reverse":[42],"copy":[43],"and":[44,65,76,101,124],"insertion":[45],"segment.":[48],"They":[49],"also":[50],"proposed":[51],"algorithm":[53,60,95,118],"to":[54],"calculate":[55],"distance.":[58],"This":[59],"is":[61,71,78,120],"$O((n+m)^4)$":[62,66],"time":[64,100,123],"space,":[68],"where":[69],"$n$":[70],"size":[73,80],"target":[74],"sequence":[75],"$m$":[77],"source":[83],"string.":[84],"sequences.":[87],"In":[88],"this":[89,129],"paper,":[90],"we":[91,106],"propose":[92],"improved":[94],"costs":[97],"$O(n(n+m))$":[98],"$O(n^2+m)$":[102,125],"space.":[104],"Furthermore,":[105],"extend":[107],"operation":[109],"set":[110],"adding":[112],"point":[113],"deletions.":[114],"We":[115],"present":[116],"$O(n^2m)$":[121],"space":[127],"more":[130],"general":[131],"model.":[132]},"counts_by_year":[],"updated_date":"2026-08-18T07:49:30.821534","created_date":"2025-10-10T00:00:00"}
