{"id":"https://openalex.org/W4403120732","doi":"https://doi.org/10.25080/wxrh8633","title":"Echostack: A flexible and scalable open-source software suite for echosounder data processing","display_name":"Echostack: A flexible and scalable open-source software suite for echosounder data processing","publication_year":2024,"publication_date":"2024-07-10","ids":{"openalex":"https://openalex.org/W4403120732","doi":"https://doi.org/10.25080/wxrh8633"},"language":"en","primary_location":{"id":"doi:10.25080/wxrh8633","is_oa":true,"landing_page_url":"https://doi.org/10.25080/wxrh8633","pdf_url":"https://proceedings.scipy.org/articles/WXRH8633.pdf","source":{"id":"https://openalex.org/S4220651651","display_name":"Proceedings of the Python in Science Conferences","issn_l":"2575-9752","issn":["2575-9752"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Python in Science Conference","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://proceedings.scipy.org/articles/WXRH8633.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017835283","display_name":"Wu-Jung Lee","orcid":"https://orcid.org/0000-0002-4112-2034"},"institutions":[{"id":"https://openalex.org/I4210138199","display_name":"University of Washington Applied Physics Laboratory","ror":"https://ror.org/03d17d270","country_code":"US","type":"facility","lineage":["https://openalex.org/I201448701","https://openalex.org/I4210138199"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Wu-Jung Lee","raw_affiliation_strings":["Applied Physics Laboratory, University of Washington"],"affiliations":[{"raw_affiliation_string":"Applied Physics Laboratory, University of Washington","institution_ids":["https://openalex.org/I4210138199"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050786353","display_name":"\u0412\u0430\u043b\u0435\u043d\u0442\u0438\u043d\u0430 \u0421\u0442\u0430\u043d\u0435\u0432\u0430","orcid":"https://orcid.org/0000-0002-3412-0364"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Valentina Staneva","raw_affiliation_strings":["eScience Institute, University of Washington"],"affiliations":[{"raw_affiliation_string":"eScience Institute, University of Washington","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048930614","display_name":"Landung Setiawan","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Landung \u201cDon\u201d Setiawan","raw_affiliation_strings":["eScience Institute, University of Washington"],"affiliations":[{"raw_affiliation_string":"eScience Institute, University of Washington","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052718749","display_name":"Emilio Mayorga","orcid":"https://orcid.org/0000-0003-2574-4623"},"institutions":[{"id":"https://openalex.org/I4210138199","display_name":"University of Washington Applied Physics Laboratory","ror":"https://ror.org/03d17d270","country_code":"US","type":"facility","lineage":["https://openalex.org/I201448701","https://openalex.org/I4210138199"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emilio Mayorga","raw_affiliation_strings":["Applied Physics Laboratory, University of Washington"],"affiliations":[{"raw_affiliation_string":"Applied Physics Laboratory, University of Washington","institution_ids":["https://openalex.org/I4210138199"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5099983331","display_name":"Caesar Tuguinay","orcid":"https://orcid.org/0009-0000-6652-1093"},"institutions":[{"id":"https://openalex.org/I4210138199","display_name":"University of Washington Applied Physics Laboratory","ror":"https://ror.org/03d17d270","country_code":"US","type":"facility","lineage":["https://openalex.org/I201448701","https://openalex.org/I4210138199"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Caesar Tuguinay","raw_affiliation_strings":["Applied Physics Laboratory, University of Washington"],"affiliations":[{"raw_affiliation_string":"Applied Physics Laboratory, University of Washington","institution_ids":["https://openalex.org/I4210138199"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107742845","display_name":"Soham Butala","orcid":"https://orcid.org/0009-0000-6479-889X"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Soham Butala","raw_affiliation_strings":["eScience Institute, University of Washington"],"affiliations":[{"raw_affiliation_string":"eScience Institute, University of Washington","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023599502","display_name":"Brandyn M. Lucca","orcid":"https://orcid.org/0000-0003-3145-2969"},"institutions":[{"id":"https://openalex.org/I4210138199","display_name":"University of Washington Applied Physics Laboratory","ror":"https://ror.org/03d17d270","country_code":"US","type":"facility","lineage":["https://openalex.org/I201448701","https://openalex.org/I4210138199"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brandyn Lucca","raw_affiliation_strings":["Applied Physics Laboratory, University of Washington"],"affiliations":[{"raw_affiliation_string":"Applied Physics Laboratory, University of Washington","institution_ids":["https://openalex.org/I4210138199"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5107742846","display_name":"Dingrui Lei","orcid":"https://orcid.org/0009-0003-8543-3138"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dingrui Lei","raw_affiliation_strings":["eScience Institute, University of Washington"],"affiliations":[{"raw_affiliation_string":"eScience Institute, University of Washington","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5017835283"],"corresponding_institution_ids":["https://openalex.org/I4210138199"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.17917784,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"386","last_page":"397"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11698","display_name":"Underwater Acoustics Research","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11698","display_name":"Underwater Acoustics Research","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12537","display_name":"Flow Measurement and Analysis","score":0.9688000082969666,"subfield":{"id":"https://openalex.org/subfields/2211","display_name":"Mechanics of Materials"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10711","display_name":"Target Tracking and Data Fusion in Sensor Networks","score":0.9194999933242798,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/toolbox","display_name":"Toolbox","score":0.7710785865783691},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6579667329788208},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6523742079734802},{"id":"https://openalex.org/keywords/echo-sounding","display_name":"Echo sounding","score":0.5739848613739014},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.5592284202575684},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5162479877471924},{"id":"https://openalex.org/keywords/open-source-software","display_name":"Open source software","score":0.49738433957099915},{"id":"https://openalex.org/keywords/remote-sensing","display_name":"Remote sensing","score":0.18187826871871948},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.18070581555366516},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1552889049053192},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13604837656021118}],"concepts":[{"id":"https://openalex.org/C2777655017","wikidata":"https://www.wikidata.org/wiki/Q1501161","display_name":"Toolbox","level":2,"score":0.7710785865783691},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6579667329788208},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6523742079734802},{"id":"https://openalex.org/C50254455","wikidata":"https://www.wikidata.org/wiki/Q1164536","display_name":"Echo sounding","level":2,"score":0.5739848613739014},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.5592284202575684},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5162479877471924},{"id":"https://openalex.org/C2988343187","wikidata":"https://www.wikidata.org/wiki/Q1130645","display_name":"Open source software","level":3,"score":0.49738433957099915},{"id":"https://openalex.org/C62649853","wikidata":"https://www.wikidata.org/wiki/Q199687","display_name":"Remote sensing","level":1,"score":0.18187826871871948},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.18070581555366516},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1552889049053192},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13604837656021118}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.25080/wxrh8633","is_oa":true,"landing_page_url":"https://doi.org/10.25080/wxrh8633","pdf_url":"https://proceedings.scipy.org/articles/WXRH8633.pdf","source":{"id":"https://openalex.org/S4220651651","display_name":"Proceedings of the Python in Science Conferences","issn_l":"2575-9752","issn":["2575-9752"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Python in Science Conference","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.25080/wxrh8633","is_oa":true,"landing_page_url":"https://doi.org/10.25080/wxrh8633","pdf_url":"https://proceedings.scipy.org/articles/WXRH8633.pdf","source":{"id":"https://openalex.org/S4220651651","display_name":"Proceedings of the Python in Science Conferences","issn_l":"2575-9752","issn":["2575-9752"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Python in Science Conference","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306101","display_name":"National Aeronautics and Space Administration","ror":"https://ror.org/027ka1x80"},{"id":"https://openalex.org/F4320310094","display_name":"University of Washington","ror":"https://ror.org/00cvxb145"},{"id":"https://openalex.org/F4320332181","display_name":"National Oceanic and Atmospheric Administration","ror":"https://ror.org/02z5nhe81"},{"id":"https://openalex.org/F4320337772","display_name":"National Marine Fisheries Service","ror":"https://ror.org/033mqx355"},{"id":"https://openalex.org/F4320337975","display_name":"NOAA Ocean Exploration","ror":"https://ror.org/05xqpda80"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403120732.pdf","grobid_xml":"https://content.openalex.org/works/W4403120732.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1701415940","https://openalex.org/W1904012188","https://openalex.org/W2037464338","https://openalex.org/W2044356494","https://openalex.org/W2090440653","https://openalex.org/W2301931783","https://openalex.org/W2410138122","https://openalex.org/W2528261749","https://openalex.org/W2810299854","https://openalex.org/W2919753043","https://openalex.org/W3001618251","https://openalex.org/W3082159907","https://openalex.org/W3124887753","https://openalex.org/W4248960270","https://openalex.org/W4286889745","https://openalex.org/W4318823852","https://openalex.org/W4383495989","https://openalex.org/W4385894245","https://openalex.org/W4394683094","https://openalex.org/W6929936638","https://openalex.org/W6964650814"],"related_works":["https://openalex.org/W4376877853","https://openalex.org/W2963339673","https://openalex.org/W1493891899","https://openalex.org/W2795728081","https://openalex.org/W4250928611","https://openalex.org/W166480398","https://openalex.org/W1612808768","https://openalex.org/W167327709","https://openalex.org/W1977393088","https://openalex.org/W4387839566"],"abstract_inverted_index":{"Water":[0],"column":[1],"sonar":[2],"data":[3,37,53,93],"collected":[4],"by":[5,41,70],"echosounders":[6],"are":[7],"essential":[8],"for":[9,114],"fisheries":[10,116],"and":[11,19,23,85,91,96],"marine":[12],"ecosystem":[13],"research,":[14],"enabling":[15],"the":[16,32,42,62],"detection,":[17],"classification,":[18],"quantification":[20],"of":[21,35,44,52,75],"fish":[22],"zooplankton":[24],"from":[25],"many":[26],"different":[27],"ocean":[28],"observing":[29],"platforms.":[30],"However,":[31],"broad":[33],"usage":[34],"these":[36],"has":[38],"been":[39],"hindered":[40],"lack":[43],"modular":[45],"software":[46,78],"tools":[47,60,99],"that":[48,56,80],"allow":[49],"flexible":[50],"composition":[51],"processing":[54],"workflows":[55],"incorporate":[57],"powerful":[58],"analytical":[59],"in":[61,110],"scientific":[63],"Python":[64,77],"ecosystem.":[65],"We":[66],"address":[67],"this":[68],"gap":[69],"developing":[71],"Echostack,":[72],"a":[73,115],"suite":[74],"open-source":[76],"packages":[79],"leverage":[81],"existing":[82],"distributed":[83],"computing":[84],"cloud-interfacing":[86],"libraries":[87],"to":[88],"support":[89],"intuitive":[90],"scalable":[92],"access,":[94],"processing,":[95],"interpretation.":[97],"These":[98],"can":[100],"be":[101],"used":[102],"individually":[103],"or":[104],"orchestrated":[105],"together,":[106],"which":[107],"we":[108],"demonstrate":[109],"example":[111],"use":[112],"cases":[113],"acoustic-trawl":[117],"survey.":[118]},"counts_by_year":[],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2024-10-05T00:00:00"}
