{"id":"https://openalex.org/W2755678179","doi":"https://doi.org/10.25080/shinma-7f4c6e7-004","title":"LabbookDB: A Wet-Work-Tracking Database Application Framework","display_name":"LabbookDB: A Wet-Work-Tracking Database Application Framework","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2755678179","doi":"https://doi.org/10.25080/shinma-7f4c6e7-004","mag":"2755678179"},"language":"en","primary_location":{"id":"doi:10.25080/shinma-7f4c6e7-004","is_oa":true,"landing_page_url":"https://doi.org/10.25080/shinma-7f4c6e7-004","pdf_url":"http://conference.scipy.org/proceedings/scipy2017/pdfs/horea-ioan_ioanas.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 16th Python in Science Conference","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"http://conference.scipy.org/proceedings/scipy2017/pdfs/horea-ioan_ioanas.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055227669","display_name":"Horea-Ioan Ioanas","orcid":"https://orcid.org/0000-0001-7037-2449"},"institutions":[{"id":"https://openalex.org/I4210090941","display_name":"Institute for Biomedical Engineering","ror":"https://ror.org/00baskk38","country_code":"CH","type":"facility","lineage":["https://openalex.org/I202697423","https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4210090941"]},{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Horea-Ioan Ioanas","raw_affiliation_strings":["Institute for Biomedical Engineering, ETH and University of Zurich"],"affiliations":[{"raw_affiliation_string":"Institute for Biomedical Engineering, ETH and University of Zurich","institution_ids":["https://openalex.org/I4210090941","https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104805474","display_name":"Bechara J. Saab","orcid":"https://orcid.org/0000-0003-1673-129X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bechara Saab","raw_affiliation_strings":["Preclinical Laboratory for Translational Research into Affective Disorders,"],"affiliations":[{"raw_affiliation_string":"Preclinical Laboratory for Translational Research into Affective Disorders,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048109297","display_name":"Markus Rudin","orcid":"https://orcid.org/0000-0003-4979-6567"},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]},{"id":"https://openalex.org/I4210090941","display_name":"Institute for Biomedical Engineering","ror":"https://ror.org/00baskk38","country_code":"CH","type":"facility","lineage":["https://openalex.org/I202697423","https://openalex.org/I2799323385","https://openalex.org/I35440088","https://openalex.org/I4210090941"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Markus Rudin","raw_affiliation_strings":["Institute for Biomedical Engineering, ETH and University of Zurich"],"affiliations":[{"raw_affiliation_string":"Institute for Biomedical Engineering, ETH and University of Zurich","institution_ids":["https://openalex.org/I4210090941","https://openalex.org/I202697423"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5055227669"],"corresponding_institution_ids":["https://openalex.org/I202697423","https://openalex.org/I4210090941"],"apc_list":null,"apc_paid":null,"fwci":0.39,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.70754331,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"20","last_page":"27"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12761","display_name":"Data Stream Mining Techniques","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12761","display_name":"Data Stream Mining Techniques","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7753872871398926},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.773634672164917},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5879706144332886},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.5716580152511597},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.46487075090408325},{"id":"https://openalex.org/keywords/database-schema","display_name":"Database schema","score":0.45393264293670654},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.41041749715805054},{"id":"https://openalex.org/keywords/database-design","display_name":"Database design","score":0.3565223813056946},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3057631254196167}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7753872871398926},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.773634672164917},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5879706144332886},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.5716580152511597},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.46487075090408325},{"id":"https://openalex.org/C30775581","wikidata":"https://www.wikidata.org/wiki/Q632285","display_name":"Database schema","level":3,"score":0.45393264293670654},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.41041749715805054},{"id":"https://openalex.org/C148840519","wikidata":"https://www.wikidata.org/wiki/Q1049878","display_name":"Database design","level":2,"score":0.3565223813056946},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3057631254196167}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.25080/shinma-7f4c6e7-004","is_oa":true,"landing_page_url":"https://doi.org/10.25080/shinma-7f4c6e7-004","pdf_url":"http://conference.scipy.org/proceedings/scipy2017/pdfs/horea-ioan_ioanas.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 16th Python in Science Conference","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.25080/shinma-7f4c6e7-004","is_oa":true,"landing_page_url":"https://doi.org/10.25080/shinma-7f4c6e7-004","pdf_url":"http://conference.scipy.org/proceedings/scipy2017/pdfs/horea-ioan_ioanas.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 16th Python in Science Conference","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2755678179.pdf","grobid_xml":"https://content.openalex.org/works/W2755678179.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W1984538181","https://openalex.org/W1996166611","https://openalex.org/W2093274439","https://openalex.org/W2302086703","https://openalex.org/W4232006394","https://openalex.org/W6949555954","https://openalex.org/W6950483299"],"related_works":["https://openalex.org/W2153455914","https://openalex.org/W325713583","https://openalex.org/W2512945146","https://openalex.org/W1501673548","https://openalex.org/W2591891926","https://openalex.org/W2460926837","https://openalex.org/W2000469556","https://openalex.org/W2031508292","https://openalex.org/W2079588361","https://openalex.org/W2098175815"],"abstract_inverted_index":{"LabbookDB":[0,28,109],"is":[1,29,41],"a":[2,49,84,112,129],"relational":[3,50],"database":[4,90],"application":[5],"framework":[6],"for":[7,120,132],"life":[8],"sciences-providing":[9],"an":[10],"extendable":[11,94],"schema":[12,69,91],"and":[13,18,21,44,52,64,95,106,124],"functions":[14],"to":[15,102],"conveniently":[16],"add":[17],"retrieve":[19],"information,":[20],"generate":[22],"summaries.":[23],"The":[24],"core":[25],"concept":[26],"of":[27,61],"that":[30],"wet":[31,113,134],"work":[32,114,135],"metadata":[33,115],"commonly":[34],"tracked":[35],"in":[36,48,75],"lab":[37],"books":[38],"or":[39],"spreadsheets":[40,63],"more":[42,45,53,92],"efficiently":[43],"reliably":[46],"stored":[47],"database,":[51],"flexibly":[54],"queried.":[55],"We":[56,87],"overcome":[57],"the":[58,76],"flexibility":[59],"limitations":[60],"designed-for-analysis":[62],"databases":[65],"by":[66,97],"building":[67],"our":[68,89],"around":[70],"atomized":[71],"physical":[72],"object":[73],"interactions":[74],"laboratory":[77],"(and":[78],"providing":[79],"plotting-and/or":[80],"analysisready":[81],"dataframes":[82],"as":[83,126,128],"compatibility":[85],"layer).":[86],"keep":[88],"easily":[93],"adaptable":[96],"using":[98],"joined":[99],"table":[100],"inheritance":[101],"manage":[103],"polymorphic":[104],"objects":[105],"their":[107],"relationships.":[108],"thus":[110],"provides":[111],"storage":[116],"model":[117],"excellently":[118],"suited":[119],"explorative":[121],"ex-post":[122],"reporting":[123],"analysis,":[125],"well":[127],"potential":[130],"infrastructure":[131],"automated":[133],"tracking.":[136]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}