{"id":"https://openalex.org/W2221503587","doi":"https://doi.org/10.25080/majora-7b98e3ed-002","title":"Python as a First Programming Language for Biomedical Scientists","display_name":"Python as a First Programming Language for Biomedical Scientists","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2221503587","doi":"https://doi.org/10.25080/majora-7b98e3ed-002","mag":"2221503587"},"language":"en","primary_location":{"id":"doi:10.25080/majora-7b98e3ed-002","is_oa":true,"landing_page_url":"https://doi.org/10.25080/majora-7b98e3ed-002","pdf_url":"http://conference.scipy.org/proceedings/scipy2015/pdfs/brian_chapman.pdf","source":{"id":"https://openalex.org/S4220651651","display_name":"Proceedings of the Python in Science Conferences","issn_l":"2575-9752","issn":["2575-9752"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Python in Science Conference","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"http://conference.scipy.org/proceedings/scipy2015/pdfs/brian_chapman.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103340062","display_name":"Brian R. Chapman","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brian Chapman","raw_affiliation_strings":["Department of Radiology, University of Utah  Unaffiliated","Department of Radiology, University of Utah \u2021 Unaffiliated"],"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Utah  Unaffiliated","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"Department of Radiology, University of Utah \u2021 Unaffiliated","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040321636","display_name":"Jeannie Irwin","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeannie Irwin","raw_affiliation_strings":["Department of Radiology, University of Utah  Unaffiliated","Department of Radiology, University of Utah \u2021 Unaffiliated"],"affiliations":[{"raw_affiliation_string":"Department of Radiology, University of Utah  Unaffiliated","institution_ids":["https://openalex.org/I223532165"]},{"raw_affiliation_string":"Department of Radiology, University of Utah \u2021 Unaffiliated","institution_ids":["https://openalex.org/I223532165"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5103340062"],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":null,"apc_paid":null,"fwci":0.8629,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.82870508,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"12","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13650","display_name":"Computational Physics and Python Applications","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13650","display_name":"Computational Physics and Python Applications","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9800999760627747,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9599000215530396,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.8606220483779907},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7105182409286499},{"id":"https://openalex.org/keywords/scripting-language","display_name":"Scripting language","score":0.6415004730224609},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.6354396343231201},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.48874378204345703},{"id":"https://openalex.org/keywords/graduate-students","display_name":"Graduate students","score":0.47975337505340576},{"id":"https://openalex.org/keywords/mathematics-education","display_name":"Mathematics education","score":0.4585762321949005},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3990255892276764},{"id":"https://openalex.org/keywords/medical-education","display_name":"Medical education","score":0.32404887676239014},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.2021409273147583},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13566112518310547},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.0815473198890686}],"concepts":[{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.8606220483779907},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7105182409286499},{"id":"https://openalex.org/C61423126","wikidata":"https://www.wikidata.org/wiki/Q187432","display_name":"Scripting language","level":2,"score":0.6415004730224609},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.6354396343231201},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.48874378204345703},{"id":"https://openalex.org/C3020528894","wikidata":"https://www.wikidata.org/wiki/Q20820271","display_name":"Graduate students","level":2,"score":0.47975337505340576},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.4585762321949005},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3990255892276764},{"id":"https://openalex.org/C509550671","wikidata":"https://www.wikidata.org/wiki/Q126945","display_name":"Medical education","level":1,"score":0.32404887676239014},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.2021409273147583},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13566112518310547},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0815473198890686},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.25080/majora-7b98e3ed-002","is_oa":true,"landing_page_url":"https://doi.org/10.25080/majora-7b98e3ed-002","pdf_url":"http://conference.scipy.org/proceedings/scipy2015/pdfs/brian_chapman.pdf","source":{"id":"https://openalex.org/S4220651651","display_name":"Proceedings of the Python in Science Conferences","issn_l":"2575-9752","issn":["2575-9752"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Python in Science Conference","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.25080/majora-7b98e3ed-002","is_oa":true,"landing_page_url":"https://doi.org/10.25080/majora-7b98e3ed-002","pdf_url":"http://conference.scipy.org/proceedings/scipy2015/pdfs/brian_chapman.pdf","source":{"id":"https://openalex.org/S4220651651","display_name":"Proceedings of the Python in Science Conferences","issn_l":"2575-9752","issn":["2575-9752"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Python in Science Conference","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2221503587.pdf","grobid_xml":"https://content.openalex.org/works/W2221503587.grobid-xml"},"referenced_works_count":7,"referenced_works":["https://openalex.org/W1968208229","https://openalex.org/W2061939373","https://openalex.org/W2083349416","https://openalex.org/W2157148654","https://openalex.org/W2162800060","https://openalex.org/W2327280718","https://openalex.org/W2342249984"],"related_works":["https://openalex.org/W2235766367","https://openalex.org/W1852679760","https://openalex.org/W2976477659","https://openalex.org/W2529681551","https://openalex.org/W2086733238","https://openalex.org/W1537913012","https://openalex.org/W4250110356","https://openalex.org/W2560829062","https://openalex.org/W2114326383","https://openalex.org/W212372412"],"abstract_inverted_index":{"We":[0],"have":[1,16,35,100],"been":[2,17,37,62],"involved":[3],"with":[4,42],"teaching":[5],"Python":[6],"to":[7,89,109],"biomedical":[8,30,38],"scientists":[9],"since":[10],"2005.":[11],"In":[12],"all,":[13],"seven":[14],"courses":[15,99],"taught:":[18],"5":[19],"at":[20],"the":[21,64,113,116],"University":[22],"of":[23,57,66,115,127],"Pittsburgh,":[24],"as":[25,85],"a":[26,76,91,102,125],"required":[27],"course":[28,117],"for":[29,94],"informatics":[31,39],"graduate":[32,40],"students.":[33],"Students":[34],"primarily":[36],"students":[41,44,67,78,118],"other":[43,82],"coming":[45],"from":[46],"human":[47],"genetics,":[48],"molecular":[49],"biology,":[50],"statistics,":[51],"and":[52,87],"similar":[53],"fields.":[54],"The":[55,97],"range":[56],"prior":[58,72],"computing":[59],"experience":[60],"has":[61],"wide:":[63],"majority":[65],"had":[68],"little":[69],"or":[70],"no":[71],"programming":[73,122],"experiences":[74],"while":[75],"few":[77],"were":[79],"experienced":[80],"in":[81],"languages":[83],"such":[84],"C/C++":[86],"wanted":[88],"learn":[90],"scripting":[92],"language":[93],"increased":[95],"productivity.":[96],"semester-long":[98],"followed":[101],"procedural":[103],"first":[104],"approach":[105],"then":[106],"an":[107,120],"introduction":[108],"object-oriented":[110],"programming.":[111],"By":[112],"end":[114],"produce":[119],"independent":[121],"project":[123],"on":[124],"topic":[126],"their":[128],"own":[129],"choosing.":[130]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
