{"id":"https://openalex.org/W4414360454","doi":"https://doi.org/10.24963/ijcai.2025/515","title":"Rewarding Explainability in Drug Repurposing with Knowledge Graphs","display_name":"Rewarding Explainability in Drug Repurposing with Knowledge Graphs","publication_year":2025,"publication_date":"2025-09-01","ids":{"openalex":"https://openalex.org/W4414360454","doi":"https://doi.org/10.24963/ijcai.2025/515"},"language":"en","primary_location":{"id":"doi:10.24963/ijcai.2025/515","is_oa":false,"landing_page_url":"https://doi.org/10.24963/ijcai.2025/515","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Thirty-Fourth International Joint Conference on Artificial Intelligence","raw_type":"proceedings-article"},"type":"article","indexed_in":["arxiv","crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2509.02276","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084053237","display_name":"Susana Nunes","orcid":null},"institutions":[{"id":"https://openalex.org/I4210159191","display_name":"Sony (Spain)","ror":"https://ror.org/05g2nyp02","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210143797","https://openalex.org/I4210159191"]},{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["ES","PT"],"is_corresponding":true,"raw_author_name":"Susana Nunes","raw_affiliation_strings":["LASIGE, Faculty of Sciences, University of Lisbon, Lisbon, Portugal","Sony AI, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculty of Sciences, University of Lisbon, Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]},{"raw_affiliation_string":"Sony AI, Barcelona, Spain","institution_ids":["https://openalex.org/I4210159191"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083911821","display_name":"Samy Badreddine","orcid":"https://orcid.org/0000-0003-1624-9188"},"institutions":[{"id":"https://openalex.org/I2277624104","display_name":"Fondazione Bruno Kessler","ror":"https://ror.org/01j33xk10","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2277624104"]},{"id":"https://openalex.org/I193223587","display_name":"University of Trento","ror":"https://ror.org/05trd4x28","country_code":"IT","type":"education","lineage":["https://openalex.org/I193223587"]},{"id":"https://openalex.org/I4210159191","display_name":"Sony (Spain)","ror":"https://ror.org/05g2nyp02","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210143797","https://openalex.org/I4210159191"]}],"countries":["ES","IT"],"is_corresponding":false,"raw_author_name":"Samy Badreddine","raw_affiliation_strings":["Bruno Kessler Institute, Trento, Italy","Sony AI, Barcelona, Spain","University of Trento, Trento, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bruno Kessler Institute, Trento, Italy","institution_ids":["https://openalex.org/I2277624104"]},{"raw_affiliation_string":"Sony AI, Barcelona, Spain","institution_ids":["https://openalex.org/I4210159191"]},{"raw_affiliation_string":"University of Trento, Trento, Italy","institution_ids":["https://openalex.org/I193223587"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034898355","display_name":"C\u00e1tia Pesquita","orcid":"https://orcid.org/0000-0002-1847-9393"},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Catia Pesquita","raw_affiliation_strings":["LASIGE, Faculty of Sciences, University of Lisbon, Lisbon, Portugal"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LASIGE, Faculty of Sciences, University of Lisbon, Lisbon, Portugal","institution_ids":["https://openalex.org/I141596103"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5084053237"],"corresponding_institution_ids":["https://openalex.org/I141596103","https://openalex.org/I4210159191"],"apc_list":null,"apc_paid":null,"fwci":0.6683,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.73129284,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"4624","last_page":"4632"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9549000263214111,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9549000263214111,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12026","display_name":"Explainable Artificial Intelligence (XAI)","score":0.9474999904632568,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9282000064849854,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/repurposing","display_name":"Repurposing","score":0.6973000168800354},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5583000183105469},{"id":"https://openalex.org/keywords/sociology-of-scientific-knowledge","display_name":"Sociology of scientific knowledge","score":0.41760000586509705},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.4165000021457672},{"id":"https://openalex.org/keywords/knowledge-graph","display_name":"Knowledge graph","score":0.40310001373291016},{"id":"https://openalex.org/keywords/reinforcement-learning","display_name":"Reinforcement learning","score":0.3398999869823456},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.3239000141620636}],"concepts":[{"id":"https://openalex.org/C519536355","wikidata":"https://www.wikidata.org/wiki/Q21021151","display_name":"Repurposing","level":2,"score":0.6973000168800354},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6873999834060669},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5583000183105469},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.46149998903274536},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4553999900817871},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.427700012922287},{"id":"https://openalex.org/C195732255","wikidata":"https://www.wikidata.org/wiki/Q981008","display_name":"Sociology of scientific knowledge","level":2,"score":0.41760000586509705},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.4165000021457672},{"id":"https://openalex.org/C2987255567","wikidata":"https://www.wikidata.org/wiki/Q33002955","display_name":"Knowledge graph","level":2,"score":0.40310001373291016},{"id":"https://openalex.org/C97541855","wikidata":"https://www.wikidata.org/wiki/Q830687","display_name":"Reinforcement learning","level":2,"score":0.3398999869823456},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.3239000141620636},{"id":"https://openalex.org/C2778136018","wikidata":"https://www.wikidata.org/wiki/Q10350689","display_name":"Predictive power","level":2,"score":0.29600000381469727},{"id":"https://openalex.org/C74197172","wikidata":"https://www.wikidata.org/wiki/Q1195339","display_name":"Directed acyclic graph","level":2,"score":0.2903999984264374},{"id":"https://openalex.org/C2781083858","wikidata":"https://www.wikidata.org/wiki/Q17327049","display_name":"Scientific literature","level":2,"score":0.28929999470710754},{"id":"https://openalex.org/C124056412","wikidata":"https://www.wikidata.org/wiki/Q3320364","display_name":"Scientific evidence","level":2,"score":0.2639999985694885},{"id":"https://openalex.org/C23213167","wikidata":"https://www.wikidata.org/wiki/Q2351730","display_name":"Scientific progress","level":2,"score":0.25369998812675476},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.2500999867916107}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.24963/ijcai.2025/515","is_oa":false,"landing_page_url":"https://doi.org/10.24963/ijcai.2025/515","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Thirty-Fourth International Joint Conference on Artificial Intelligence","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:2509.02276","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2509.02276","pdf_url":"https://arxiv.org/pdf/2509.02276","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:doi:10.48550/arxiv.2509.02276","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2509.02276","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2509.02276","pdf_url":"https://arxiv.org/pdf/2509.02276","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Knowledge":[0],"graphs":[1],"(KGs)":[2],"are":[3,106],"powerful":[4],"tools":[5],"for":[6,22,54],"modelling":[7],"complex,":[8],"multi-relational":[9],"data":[10],"and":[11,68,109,144],"supporting":[12],"hypothesis":[13],"generation,":[14],"particularly":[15],"in":[16,59,62,84,111,119,150],"applications":[17],"like":[18],"drug":[19,120],"repurposing.":[20],"However,":[21],"predictive":[23,139,151],"methods":[24],"to":[25,42,78,134,159],"gain":[26],"acceptance":[27],"as":[28,155],"credible":[29],"scientific":[30,45,56,76,162],"tools,":[31],"they":[32],"must":[33],"ensure":[34],"not":[35],"only":[36],"accuracy":[37],"but":[38],"also":[39],"the":[40,85,104,147],"capacity":[41],"offer":[43],"meaningful":[44],"explanations.":[46],"This":[47],"paper":[48],"presents":[49],"a":[50,80,91,156],"novel":[51],"approach":[52,94,118],"REx,":[53],"generating":[55],"explanations":[57,105,136],"based":[58],"link":[60],"prediction":[61],"knowledge":[63,125,143],"graphs.":[64],"It":[65],"employs":[66],"reward":[67],"policy":[69],"mechanisms":[70],"that":[71,103,137,145],"consider":[72],"desirable":[73],"properties":[74],"of":[75,87],"explanation":[77],"guide":[79],"reinforcement":[81],"learning":[82],"agent":[83],"identification":[86],"explanatory":[88,97],"paths":[89,98],"within":[90],"KG.":[92],"The":[93,128],"further":[95],"enriches":[96],"with":[99],"domain-specific":[100],"ontologies,":[101],"ensuring":[102],"both":[107],"insightful":[108],"grounded":[110],"established":[112],"biomedical":[113,142],"knowledge.":[114],"We":[115],"evaluate":[116],"our":[117],"repurposing":[121],"using":[122],"three":[123],"popular":[124],"graph":[126],"benchmarks.":[127],"results":[129],"clearly":[130],"demonstrate":[131],"its":[132],"ability":[133],"generate":[135],"validate":[138],"insights":[140],"against":[141],"outperform":[146],"state-of-the-art":[148],"approaches":[149],"performance,":[152],"establishing":[153],"REx":[154],"relevant":[157],"contribution":[158],"advance":[160],"AI-driven":[161],"discovery.":[163]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-05-09T13:55:54.758798","created_date":"2025-10-10T00:00:00"}
