{"id":"https://openalex.org/W2044864012","doi":"https://doi.org/10.2478/amcs-2013-0017","title":"Mathematical modelling of molecule evolution in protocells","display_name":"Mathematical modelling of molecule evolution in protocells","publication_year":2013,"publication_date":"2013-03-01","ids":{"openalex":"https://openalex.org/W2044864012","doi":"https://doi.org/10.2478/amcs-2013-0017","mag":"2044864012"},"language":"en","primary_location":{"id":"doi:10.2478/amcs-2013-0017","is_oa":true,"landing_page_url":"https://doi.org/10.2478/amcs-2013-0017","pdf_url":"https://sciendo.com/pdf/10.2478/amcs-2013-0017","source":{"id":"https://openalex.org/S117679522","display_name":"International Journal of Applied Mathematics and Computer Science","issn_l":"1641-876X","issn":["1641-876X","2083-8492"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320322","host_organization_name":"De Gruyter Open","host_organization_lineage":["https://openalex.org/P4310320322","https://openalex.org/P4310313990"],"host_organization_lineage_names":["De Gruyter Open","De Gruyter"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Applied Mathematics and Computer Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://sciendo.com/pdf/10.2478/amcs-2013-0017","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025219242","display_name":"Dariusz Myszor","orcid":"https://orcid.org/0000-0002-5764-6246"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Dariusz Myszor","raw_affiliation_strings":["Institute of Informatics Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland","Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Informatics Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]},{"raw_affiliation_string":"Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082938626","display_name":"Krzysztof A. Cyran","orcid":"https://orcid.org/0000-0003-1789-4939"},"institutions":[{"id":"https://openalex.org/I119004910","display_name":"Silesian University of Technology","ror":"https://ror.org/02dyjk442","country_code":"PL","type":"education","lineage":["https://openalex.org/I119004910"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Krzysztof A. Cyran","raw_affiliation_strings":["Institute of Informatics Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland","Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Informatics Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]},{"raw_affiliation_string":"Institute of Informatics, Silesian University of Technology, Akademicka 16, 44-100 Gliwice, Poland","institution_ids":["https://openalex.org/I119004910"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4080,"currency":"PLN","value_usd":1100},"apc_paid":{"value":4080,"currency":"PLN","value_usd":1100},"fwci":1.0315,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.79888035,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"23","issue":"1","first_page":"213","last_page":"229"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11445","display_name":"Origins and Evolution of Life","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/3103","display_name":"Astronomy and Astrophysics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11445","display_name":"Origins and Evolution of Life","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/3103","display_name":"Astronomy and Astrophysics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9650999903678894,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.9070000052452087,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protocell","display_name":"Protocell","score":0.9925767183303833},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.6862055659294128},{"id":"https://openalex.org/keywords/phosphodiester-bond","display_name":"Phosphodiester bond","score":0.603299081325531},{"id":"https://openalex.org/keywords/ribozyme","display_name":"Ribozyme","score":0.577818751335144},{"id":"https://openalex.org/keywords/abiogenesis","display_name":"Abiogenesis","score":0.4459567070007324},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.4316178858280182},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.3839237093925476},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.3607195019721985},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3506074547767639},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.12211358547210693},{"id":"https://openalex.org/keywords/astrobiology","display_name":"Astrobiology","score":0.11977231502532959}],"concepts":[{"id":"https://openalex.org/C114032466","wikidata":"https://www.wikidata.org/wiki/Q1389465","display_name":"Protocell","level":3,"score":0.9925767183303833},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.6862055659294128},{"id":"https://openalex.org/C38441620","wikidata":"https://www.wikidata.org/wiki/Q863983","display_name":"Phosphodiester bond","level":4,"score":0.603299081325531},{"id":"https://openalex.org/C76346623","wikidata":"https://www.wikidata.org/wiki/Q205858","display_name":"Ribozyme","level":4,"score":0.577818751335144},{"id":"https://openalex.org/C190161988","wikidata":"https://www.wikidata.org/wiki/Q231218","display_name":"Abiogenesis","level":2,"score":0.4459567070007324},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.4316178858280182},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.3839237093925476},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.3607195019721985},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3506074547767639},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.12211358547210693},{"id":"https://openalex.org/C87355193","wikidata":"https://www.wikidata.org/wiki/Q411","display_name":"Astrobiology","level":1,"score":0.11977231502532959},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.2478/amcs-2013-0017","is_oa":true,"landing_page_url":"https://doi.org/10.2478/amcs-2013-0017","pdf_url":"https://sciendo.com/pdf/10.2478/amcs-2013-0017","source":{"id":"https://openalex.org/S117679522","display_name":"International Journal of Applied Mathematics and Computer Science","issn_l":"1641-876X","issn":["1641-876X","2083-8492"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320322","host_organization_name":"De Gruyter Open","host_organization_lineage":["https://openalex.org/P4310320322","https://openalex.org/P4310313990"],"host_organization_lineage_names":["De Gruyter Open","De Gruyter"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Applied Mathematics and Computer Science","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.390.9295","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.390.9295","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://matwbn.icm.edu.pl/ksiazki/amc/amc23/amc23117.pdf","raw_type":"text"},{"id":"pmh:oai:zbc.uz.zgora.pl:78822","is_oa":false,"landing_page_url":"https://zbc.uz.zgora.pl/dlibra/docmetadata?showContent=true&id=78822","pdf_url":null,"source":{"id":"https://openalex.org/S4306400400","display_name":"Digital library of Zielona Gora (University of Zielona G\u00f3ra)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I46305939","host_organization_name":"University of Zielona G\u00f3ra","host_organization_lineage":["https://openalex.org/I46305939"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://www.amcs.uz.zgora.pl/?action=papers&issue=52","raw_type":"artyku\u0142"}],"best_oa_location":{"id":"doi:10.2478/amcs-2013-0017","is_oa":true,"landing_page_url":"https://doi.org/10.2478/amcs-2013-0017","pdf_url":"https://sciendo.com/pdf/10.2478/amcs-2013-0017","source":{"id":"https://openalex.org/S117679522","display_name":"International Journal of Applied Mathematics and Computer Science","issn_l":"1641-876X","issn":["1641-876X","2083-8492"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320322","host_organization_name":"De Gruyter Open","host_organization_lineage":["https://openalex.org/P4310320322","https://openalex.org/P4310313990"],"host_organization_lineage_names":["De Gruyter Open","De Gruyter"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Applied Mathematics and Computer Science","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310133","display_name":"Rice University","ror":"https://ror.org/008zs3103"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2044864012.pdf","grobid_xml":"https://content.openalex.org/works/W2044864012.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W139631309","https://openalex.org/W190669600","https://openalex.org/W398424092","https://openalex.org/W622439547","https://openalex.org/W1496999486","https://openalex.org/W1534777183","https://openalex.org/W1548173963","https://openalex.org/W1559984321","https://openalex.org/W1566677353","https://openalex.org/W1593684180","https://openalex.org/W1651738866","https://openalex.org/W1967958557","https://openalex.org/W1970618289","https://openalex.org/W1975747768","https://openalex.org/W1979335055","https://openalex.org/W1990786663","https://openalex.org/W1994563829","https://openalex.org/W1996205120","https://openalex.org/W1998528497","https://openalex.org/W1999528796","https://openalex.org/W2001534687","https://openalex.org/W2004025331","https://openalex.org/W2017457582","https://openalex.org/W2018664170","https://openalex.org/W2019823335","https://openalex.org/W2051636768","https://openalex.org/W2058474241","https://openalex.org/W2058939722","https://openalex.org/W2065361798","https://openalex.org/W2089676389","https://openalex.org/W2098725272","https://openalex.org/W2100598610","https://openalex.org/W2102945698","https://openalex.org/W2125865583","https://openalex.org/W2132920850","https://openalex.org/W2134171083","https://openalex.org/W2144682212","https://openalex.org/W2148675208","https://openalex.org/W2154519804","https://openalex.org/W2164701497","https://openalex.org/W2166637067","https://openalex.org/W2168989506","https://openalex.org/W2170383587","https://openalex.org/W2204803291","https://openalex.org/W2223786752","https://openalex.org/W2290153106","https://openalex.org/W2483956590","https://openalex.org/W2531752161","https://openalex.org/W3041019241","https://openalex.org/W4231137976","https://openalex.org/W4285719527","https://openalex.org/W4381434531"],"related_works":["https://openalex.org/W3158228766","https://openalex.org/W2145660312","https://openalex.org/W622439547","https://openalex.org/W2130182503","https://openalex.org/W2163548807","https://openalex.org/W213441959","https://openalex.org/W4319812194","https://openalex.org/W2070021568","https://openalex.org/W2114626744","https://openalex.org/W2968973724"],"abstract_inverted_index":{"In":[0],"this":[1],"article,":[2],"we":[3,27],"analyse":[4],"the":[5,8,23,41,62,84,90,103,123,128],"process":[6],"of":[7,10,22,33,36,43,83,86,92,105,111,118,130,135,139],"emergence":[9],"RNA":[11,24,71,107],"polynucleotides":[12],"located":[13],"in":[14,75],"an":[15,19,44,106],"enclosed":[16,57],"environment,":[17],"at":[18],"early":[20,45],"stage":[21],"world.":[25],"Therefore":[26],"prepared":[28],"a":[29,34,50],"mathematical":[30],"model,":[31],"composed":[32],"set":[35],"differential":[37],"equations,":[38],"which":[39],"simulates":[40],"behaviour":[42],"biological":[46],"system":[47],"bounded":[48],"by":[49],"protocell":[51],"membrane.":[52],"There":[53,65],"is":[54],"evidence":[55],"that":[56,70,100,127],"environments":[58],"were":[59],"available":[60],"on":[61,89],"primordial":[63],"Earth.":[64],"are":[66],"also":[67],"experimental":[68],"proofs":[69],"strands":[72],"can":[73],"develop":[74],"these":[76],"formations.":[77],"The":[78],"proposed":[79],"model":[80,124],"allows":[81],"analysis":[82],"influence":[85],"membrane":[87],"permeability":[88],"composition":[91],"internal":[93],"material.":[94],"It":[95],"takes":[96],"into":[97],"account":[98],"phenomena":[99],"lead":[101],"to":[102],"elongation":[104],"strand":[108],"(ligation),":[109],"fission":[110],"molecules":[112],"(phosphodiester":[113],"bond":[114],"breakage)":[115],"and":[116,137],"replication":[117],"polynucleotides.":[119],"Results":[120],"obtained":[121],"from":[122],"point":[125],"out":[126],"existence":[129],"protocells":[131],"might":[132],"support":[133],"concentration":[134],"material":[136],"creation":[138],"longer":[140],"molecules.":[141]},"counts_by_year":[{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
