{"id":"https://openalex.org/W3192786972","doi":"https://doi.org/10.23919/mixdes52406.2021.9497628","title":"Molecular Simulations Using Boltzmann\u2019s Thermally Activated Diffusion - Implementation on ARUZ \u2013 Massively-parallel FPGA-based Machine","display_name":"Molecular Simulations Using Boltzmann\u2019s Thermally Activated Diffusion - Implementation on ARUZ \u2013 Massively-parallel FPGA-based Machine","publication_year":2021,"publication_date":"2021-06-24","ids":{"openalex":"https://openalex.org/W3192786972","doi":"https://doi.org/10.23919/mixdes52406.2021.9497628","mag":"3192786972"},"language":"en","primary_location":{"id":"doi:10.23919/mixdes52406.2021.9497628","is_oa":false,"landing_page_url":"https://doi.org/10.23919/mixdes52406.2021.9497628","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 28th International Conference on Mixed Design of Integrated Circuits and System","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020471876","display_name":"Grzegorz Jab\u0142o\u0144ski","orcid":"https://orcid.org/0000-0003-0376-3583"},"institutions":[{"id":"https://openalex.org/I188884621","display_name":"Lodz University of Technology","ror":"https://ror.org/00s8fpf52","country_code":"PL","type":"education","lineage":["https://openalex.org/I188884621"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Grzegorz Jablonski","raw_affiliation_strings":["Lodz University of Technology, Lodz, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lodz University of Technology, Lodz, Poland","institution_ids":["https://openalex.org/I188884621"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057249541","display_name":"Piotr Amrozik","orcid":"https://orcid.org/0000-0001-7721-4240"},"institutions":[{"id":"https://openalex.org/I188884621","display_name":"Lodz University of Technology","ror":"https://ror.org/00s8fpf52","country_code":"PL","type":"education","lineage":["https://openalex.org/I188884621"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Piotr Amrozik","raw_affiliation_strings":["Lodz University of Technology, Lodz, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lodz University of Technology, Lodz, Poland","institution_ids":["https://openalex.org/I188884621"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035278875","display_name":"Krzysztof Ha\u0142agan","orcid":"https://orcid.org/0000-0001-6412-2910"},"institutions":[{"id":"https://openalex.org/I188884621","display_name":"Lodz University of Technology","ror":"https://ror.org/00s8fpf52","country_code":"PL","type":"education","lineage":["https://openalex.org/I188884621"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Krzysztof Halagan","raw_affiliation_strings":["Lodz University of Technology, Lodz, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lodz University of Technology, Lodz, Poland","institution_ids":["https://openalex.org/I188884621"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I188884621"],"apc_list":null,"apc_paid":null,"fwci":0.4833,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56334731,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"128","last_page":"131"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10412","display_name":"Microfluidic and Capillary Electrophoresis Applications","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10412","display_name":"Microfluidic and Capillary Electrophoresis Applications","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11582","display_name":"Nanopore and Nanochannel Transport Studies","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11520","display_name":"Advanced Thermodynamics and Statistical Mechanics","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/field-programmable-gate-array","display_name":"Field-programmable gate array","score":0.8769997358322144},{"id":"https://openalex.org/keywords/massively-parallel","display_name":"Massively parallel","score":0.8634902238845825},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7021622061729431},{"id":"https://openalex.org/keywords/analyser","display_name":"Analyser","score":0.6087750792503357},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.5314817428588867},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.5180675983428955},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.40478038787841797},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.34045010805130005},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1468839943408966},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.07596743106842041}],"concepts":[{"id":"https://openalex.org/C42935608","wikidata":"https://www.wikidata.org/wiki/Q190411","display_name":"Field-programmable gate array","level":2,"score":0.8769997358322144},{"id":"https://openalex.org/C190475519","wikidata":"https://www.wikidata.org/wiki/Q544384","display_name":"Massively parallel","level":2,"score":0.8634902238845825},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7021622061729431},{"id":"https://openalex.org/C26834552","wikidata":"https://www.wikidata.org/wiki/Q3275846","display_name":"Analyser","level":2,"score":0.6087750792503357},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.5314817428588867},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.5180675983428955},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.40478038787841797},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.34045010805130005},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1468839943408966},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.07596743106842041},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.23919/mixdes52406.2021.9497628","is_oa":false,"landing_page_url":"https://doi.org/10.23919/mixdes52406.2021.9497628","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 28th International Conference on Mixed Design of Integrated Circuits and System","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.8899999856948853,"id":"https://metadata.un.org/sdg/7"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1995187800","https://openalex.org/W2043514824","https://openalex.org/W2050424346","https://openalex.org/W2133623681","https://openalex.org/W2341020925","https://openalex.org/W2808939299","https://openalex.org/W3091999293","https://openalex.org/W6922228358"],"related_works":["https://openalex.org/W1542309263","https://openalex.org/W119040397","https://openalex.org/W148823471","https://openalex.org/W2002703587","https://openalex.org/W3217667592","https://openalex.org/W3192786972","https://openalex.org/W2334801618","https://openalex.org/W2622518229","https://openalex.org/W3197018050","https://openalex.org/W3189203646"],"abstract_inverted_index":{"ARUZ":[0,61],"(Analizator":[1],"Rzeczywistych":[2],"Uk\u0142ad\u00f3w":[3],"Z\u0142o\u017conych,":[4],"Analyser":[5],"of":[6],"Real":[7],"Complex":[8],"Systems)":[9],"is":[10],"a":[11],"massively":[12],"parallel":[13],"FPGA-based":[14],"simulator":[15],"located":[16],"at":[17],"BioNanoPark":[18],"Lodz.":[19],"This":[20,47],"machine":[21],"has":[22],"been":[23],"designed":[24],"to":[25],"reflect":[26],"the":[27],"Dynamic":[28],"Lattice":[29],"Liquid":[30],"(DLL)":[31],"algorithm":[32],"in":[33,56,68],"hardware.":[34],"In":[35],"this":[36],"paper,":[37],"FPGA":[38],"implementation":[39],"details":[40],"are":[41],"presented":[42],"for":[43],"DLL":[44],"functionality":[45],"extension.":[46],"extension":[48],"allows":[49],"taking":[50],"into":[51],"account":[52],"potential":[53],"energy":[54],"barriers":[55],"molecular":[57],"simulations":[58],"performed":[59],"on":[60],"and":[62],"thus":[63],"modeling":[64],"thermally-activated":[65],"diffusion":[66],"processes":[67],"liquids.":[69]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
