{"id":"https://openalex.org/W2188979829","doi":"https://doi.org/10.2390/biecoll-jib-2015-264","title":"Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2","display_name":"Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2188979829","doi":"https://doi.org/10.2390/biecoll-jib-2015-264","mag":"2188979829","pmid":"https://pubmed.ncbi.nlm.nih.gov/26528562"},"language":"en","primary_location":{"id":"pmid:26528562","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26528562","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},"type":"article","indexed_in":["datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://researchmgt.monash.edu/ws/files/145376816/97230468_oa.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020746275","display_name":"Anatoly Sorokin","orcid":"https://orcid.org/0000-0002-0047-0606"},"institutions":[{"id":"https://openalex.org/I4210155801","display_name":"Institute of Cell Biophysics","ror":"https://ror.org/05gbnpz65","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210129690","https://openalex.org/I4210155801"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Sorokin, Anatoly","raw_affiliation_strings":["1Institute of Cell Biophysics RAS, Pushchino, Russian Federation"],"affiliations":[{"raw_affiliation_string":"1Institute of Cell Biophysics RAS, Pushchino, Russian Federation","institution_ids":["https://openalex.org/I4210155801"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112438594","display_name":"Nicolas Le Nov\u00e8re","orcid":null},"institutions":[{"id":"https://openalex.org/I1302113299","display_name":"Babraham Institute","ror":"https://ror.org/01d5qpn59","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1302113299","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Le Novere, Nicolas","raw_affiliation_strings":["2Babraham Institute, Cambridge, United Kingdom of Great Britain and Northern Ireland"],"affiliations":[{"raw_affiliation_string":"2Babraham Institute, Cambridge, United Kingdom of Great Britain and Northern Ireland","institution_ids":["https://openalex.org/I1302113299"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026945351","display_name":"Augustin Luna","orcid":"https://orcid.org/0000-0001-5709-371X"},"institutions":[{"id":"https://openalex.org/I39965400","display_name":"Kettering University","ror":"https://ror.org/03rcspa57","country_code":"US","type":"education","lineage":["https://openalex.org/I39965400"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Luna, Augustin","raw_affiliation_strings":["3Memorial Sloan-Kettering Institute, New York City, United States of America"],"affiliations":[{"raw_affiliation_string":"3Memorial Sloan-Kettering Institute, New York City, United States of America","institution_ids":["https://openalex.org/I39965400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035416919","display_name":"Tobias Czauderna","orcid":"https://orcid.org/0000-0002-1788-9593"},"institutions":[{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Czauderna, Tobias","raw_affiliation_strings":["4Monash University, Clayton, Australia"],"affiliations":[{"raw_affiliation_string":"4Monash University, Clayton, Australia","institution_ids":["https://openalex.org/I56590836"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037803004","display_name":"Emek Demir","orcid":"https://orcid.org/0000-0002-3663-7113"},"institutions":[{"id":"https://openalex.org/I39965400","display_name":"Kettering University","ror":"https://ror.org/03rcspa57","country_code":"US","type":"education","lineage":["https://openalex.org/I39965400"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Demir, Emek","raw_affiliation_strings":["3Memorial Sloan-Kettering Institute, New York City, United States of America"],"affiliations":[{"raw_affiliation_string":"3Memorial Sloan-Kettering Institute, New York City, United States of America","institution_ids":["https://openalex.org/I39965400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045676311","display_name":"Robin Haw","orcid":"https://orcid.org/0000-0002-2013-7835"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Haw, Robin","raw_affiliation_strings":["5Ontario Institute for Cancer Research, Toronto, Canada"],"affiliations":[{"raw_affiliation_string":"5Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060575386","display_name":"Huaiyu Mi","orcid":"https://orcid.org/0000-0001-8721-202X"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mi, Huaiyu","raw_affiliation_strings":["6University of Southern California, Los Angeles, United States of America"],"affiliations":[{"raw_affiliation_string":"6University of Southern California, Los Angeles, United States of America","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053863175","display_name":"Stuart Moodie","orcid":"https://orcid.org/0000-0001-6191-5595"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Moodie, Stuart","raw_affiliation_strings":["7Eight Pillars Ltd, Edinburgh, United Kingdom of Great Britain and Northern Ireland"],"affiliations":[{"raw_affiliation_string":"7Eight Pillars Ltd, Edinburgh, United Kingdom of Great Britain and Northern Ireland","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003441276","display_name":"Falk Schreiber","orcid":"https://orcid.org/0000-0002-9307-3254"},"institutions":[{"id":"https://openalex.org/I68956291","display_name":"Martin Luther University Halle-Wittenberg","ror":"https://ror.org/05gqaka33","country_code":"DE","type":"education","lineage":["https://openalex.org/I68956291"]},{"id":"https://openalex.org/I2801009184","display_name":"Luther University","ror":"https://ror.org/015dhy417","country_code":"KR","type":"education","lineage":["https://openalex.org/I2801009184"]}],"countries":["DE","KR"],"is_corresponding":false,"raw_author_name":"Schreiber, Falk","raw_affiliation_strings":["Martin-Luther Universitat Halle-Wittenberg (Martin Luther University Halle-Wittenberg)"],"affiliations":[{"raw_affiliation_string":"Martin-Luther Universitat Halle-Wittenberg (Martin Luther University Halle-Wittenberg)","institution_ids":["https://openalex.org/I68956291","https://openalex.org/I2801009184"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109878348","display_name":"Alice Vill\u00e9ger","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Villeger, Alice","raw_affiliation_strings":["Freelance consultant"],"affiliations":[{"raw_affiliation_string":"Freelance consultant","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":7,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5020746275"],"corresponding_institution_ids":["https://openalex.org/I4210155801"],"apc_list":null,"apc_paid":null,"fwci":1.8111,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.85329572,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"12","issue":"2","first_page":"264","last_page":"264"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9879999756813049,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8087171316146851},{"id":"https://openalex.org/keywords/notation","display_name":"Notation","score":0.6703529357910156},{"id":"https://openalex.org/keywords/entity\u2013relationship-model","display_name":"Entity\u2013relationship model","score":0.6531385779380798},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.6170129179954529},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5885676741600037},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.5503057837486267},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.48573142290115356},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4601813554763794},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.424453467130661},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.385861337184906},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.3530556261539459},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3452516496181488},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.32338637113571167},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.1821366846561432},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.17595431208610535},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.16719037294387817},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.1471276581287384},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09334060549736023}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8087171316146851},{"id":"https://openalex.org/C45357846","wikidata":"https://www.wikidata.org/wiki/Q2001982","display_name":"Notation","level":2,"score":0.6703529357910156},{"id":"https://openalex.org/C103593891","wikidata":"https://www.wikidata.org/wiki/Q624546","display_name":"Entity\u2013relationship model","level":3,"score":0.6531385779380798},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.6170129179954529},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5885676741600037},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.5503057837486267},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.48573142290115356},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4601813554763794},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.424453467130661},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.385861337184906},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.3530556261539459},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3452516496181488},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.32338637113571167},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.1821366846561432},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.17595431208610535},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.16719037294387817},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.1471276581287384},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09334060549736023},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D017408","descriptor_name":"Guidelines as Topic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D017408","descriptor_name":"Guidelines as Topic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D038622","descriptor_name":"Internationality","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false}],"locations_count":6,"locations":[{"id":"pmid:26528562","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26528562","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:monash.edu:publications/5cf788bd-6dbd-481c-bcf1-799e66cafd48","is_oa":true,"landing_page_url":"https://research.monash.edu/en/publications/5cf788bd-6dbd-481c-bcf1-799e66cafd48","pdf_url":"https://researchmgt.monash.edu/ws/files/145376816/97230468_oa.pdf","source":{"id":"https://openalex.org/S4306402625","display_name":"Monash University Research Portal (Monash University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I56590836","host_organization_name":"Monash University","host_organization_lineage":["https://openalex.org/I56590836"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sorokin, A, Le Nov\u00e8re, N, Luna, A, Czauderna, T, Demir, E, Haw, R, Mi, H, Moodie, S, Schreiber, F & Vill\u00e9ger, A 2015, 'Systems Biology Graphical Notation : Entity Relationship language Level 1 Version 2', Journal of integrative bioinformatics, vol. 12, no. 2, 264, pp. 281-340. https://doi.org/10.2390/biecoll-jib-2015-264","raw_type":"article"},{"id":"pmh:oai:biecoll.ub.uni-bielefeld.de:5368","is_oa":false,"landing_page_url":"http://biecoll.ub.uni-bielefeld.de/volltexte/2015/5368/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://journal.imbio.de","raw_type":"Journal Article"},{"id":"pmh:oai:kops.uni-konstanz.de:123456789/38242","is_oa":false,"landing_page_url":"http://nbn-resolving.de/urn:nbn:de:bsz:352-2-1duddpglw9n6v6","pdf_url":null,"source":{"id":"https://openalex.org/S4306401487","display_name":"KOPS (University of Konstanz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189712700","host_organization_name":"University of Konstanz","host_organization_lineage":["https://openalex.org/I189712700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of integrative bioinformatics (JIB). 2015, 12(2), 264. eISSN 1613-4516. Verf\u00fcgbar unter: doi: 10.2390/biecoll-jib-2015-264","raw_type":"doc-type:Text"},{"id":"pmh:oai:monash.edu:publications/5cf788bd-6dbd-481c-bcf1-799e66cafd48","is_oa":true,"landing_page_url":"https://www.degruyter.com/view/j/jib.2015.12.issue-2/biecoll-jib-2015-264/biecoll-jib-2015-264.xml?format=INT","pdf_url":null,"source":{"id":"https://openalex.org/S4306402625","display_name":"Monash University Research Portal (Monash University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I56590836","host_organization_name":"Monash University","host_organization_lineage":["https://openalex.org/I56590836"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sorokin , A , Le Nov\u00e8re , N , Luna , A , Czauderna , T , Demir , E , Haw , R , Mi , H , Moodie , S , Schreiber , F &amp; Vill\u00e9ger , A 2015 , ' Systems Biology Graphical Notation : Entity Relationship language Level 1 Version 2 ' , Journal of integrative bioinformatics , vol. 12 , no. 2 , 264 , pp. 281-340 . https://doi.org/10.2390/biecoll-jib-2015-264","raw_type":"article"},{"id":"doi:10.2390/biecoll-jib-2015-264","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2015-264","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"pmh:oai:monash.edu:publications/5cf788bd-6dbd-481c-bcf1-799e66cafd48","is_oa":true,"landing_page_url":"https://research.monash.edu/en/publications/5cf788bd-6dbd-481c-bcf1-799e66cafd48","pdf_url":"https://researchmgt.monash.edu/ws/files/145376816/97230468_oa.pdf","source":{"id":"https://openalex.org/S4306402625","display_name":"Monash University Research Portal (Monash University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I56590836","host_organization_name":"Monash University","host_organization_lineage":["https://openalex.org/I56590836"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Sorokin, A, Le Nov\u00e8re, N, Luna, A, Czauderna, T, Demir, E, Haw, R, Mi, H, Moodie, S, Schreiber, F & Vill\u00e9ger, A 2015, 'Systems Biology Graphical Notation : Entity Relationship language Level 1 Version 2', Journal of integrative bioinformatics, vol. 12, no. 2, 264, pp. 281-340. https://doi.org/10.2390/biecoll-jib-2015-264","raw_type":"article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.47999998927116394}],"awards":[{"id":"https://openalex.org/G1934935867","display_name":null,"funder_award_id":"Engineering and Physical Sciences R","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"},{"id":"https://openalex.org/G3330119427","display_name":null,"funder_award_id":"EPSRC","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4115941747","display_name":null,"funder_award_id":"Ministry of Education","funder_id":"https://openalex.org/F4320334627","funder_display_name":"Engineering and Physical Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309398","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055"},{"id":"https://openalex.org/F4320314024","display_name":"Ontario Genomics","ror":null},{"id":"https://openalex.org/F4320317194","display_name":"USC Norris Comprehensive Cancer Center","ror":null},{"id":"https://openalex.org/F4320319905","display_name":"Ontario Genomics Institute","ror":"https://ror.org/00c68jz96"},{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320320971","display_name":"Monash University","ror":"https://ror.org/02bfwt286"},{"id":"https://openalex.org/F4320327736","display_name":"Universit\u00e4t Rostock","ror":"https://ror.org/03zdwsf69"},{"id":"https://openalex.org/F4320334627","display_name":"Engineering and Physical Sciences Research Council","ror":"https://ror.org/0439y7842"},{"id":"https://openalex.org/F4320334789","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2188979829.pdf","grobid_xml":"https://content.openalex.org/works/W2188979829.grobid-xml"},"referenced_works_count":1,"referenced_works":["https://openalex.org/W2102664288"],"related_works":["https://openalex.org/W3107474891","https://openalex.org/W27605384","https://openalex.org/W2003067785","https://openalex.org/W2152376294","https://openalex.org/W4242519561","https://openalex.org/W4242902282","https://openalex.org/W2188979829","https://openalex.org/W2950329335","https://openalex.org/W4254464710","https://openalex.org/W2416349955"],"abstract_inverted_index":{"The":[0,20,91,121,132],"Systems":[1],"Biological":[2],"Graphical":[3],"Notation":[4],"(SBGN)":[5],"is":[6,24,156],"an":[7],"international":[8],"community":[9],"effort":[10],"for":[11,32,75],"standardized":[12],"graphical":[13],"representations":[14],"of":[15,22,47,78,81,89,137,153],"biological":[16,48,82,98,125,164,178],"pathways":[17],"and":[18,29,44,55,70,83,100,103,130,139,147,166],"networks.":[19],"goal":[21],"SBGN":[23,62,92,108],"to":[25,41,159],"provide":[26,135],"unambiguous":[27],"pathway":[28],"network":[30],"maps":[31],"readers":[33],"with":[34],"different":[35,51,79,87],"scientific":[36],"backgrounds":[37],"as":[38,40,128],"well":[39],"support":[42],"efficient":[43],"accurate":[45],"exchange":[46],"knowledge":[49],"between":[50,115],"research":[52],"communities,":[53],"industry,":[54],"other":[56],"players":[57],"in":[58,163,176],"systems":[59,85],"biology.":[60],"Three":[61],"languages,":[63],"Process":[64],"Description":[65],"(PD),":[66],"Entity":[67,93],"Relationship":[68,94],"(ER)":[69,96],"Activity":[71],"Flow":[72],"(AF),":[73],"allow":[74],"the":[76,157],"representation":[77],"aspects":[80],"biochemical":[84],"at":[86],"levels":[88],"detail.":[90],"language":[95],"represents":[97],"entities":[99,116],"their":[101],"interactions":[102,138],"relationships":[104,114,140],"within":[105],"a":[106,173],"network.":[107],"ER":[109,155],"focuses":[110],"on":[111],"all":[112,150],"potential":[113],"without":[117],"considering":[118],"temporal":[119],"aspects.":[120],"nodes":[122],"(elements)":[123],"describe":[124],"entities,":[126],"such":[127],"proteins":[129],"complexes.":[131],"edges":[133],"(connections)":[134],"descriptions":[136],"(or":[141],"influences),":[142],"e.g.,":[143],"complex":[144],"formation,":[145],"stimulation":[146],"inhibition.":[148],"Among":[149],"three":[151],"languages":[152],"SBGN,":[154],"closest":[158],"protein":[160],"interaction":[161],"networks":[162],"literature":[165],"textbooks,":[167],"but":[168],"its":[169],"well-defined":[170],"semantics":[171],"offer":[172],"superior":[174],"precision":[175],"expressing":[177],"knowledge.":[179]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
