{"id":"https://openalex.org/W2108986829","doi":"https://doi.org/10.2390/biecoll-jib-2014-236","title":"Classification of Breast Cancer Subtypes by combining Gene Expression and DNA Methylation Data","display_name":"Classification of Breast Cancer Subtypes by combining Gene Expression and DNA Methylation Data","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2108986829","doi":"https://doi.org/10.2390/biecoll-jib-2014-236","mag":"2108986829","pmid":"https://pubmed.ncbi.nlm.nih.gov/24953305"},"language":"en","primary_location":{"id":"pmid:24953305","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24953305","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},"type":"article","indexed_in":["datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2390/biecoll-jib-2014-236","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035928806","display_name":"Markus List","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"List, Markus","raw_affiliation_strings":["University of Southern Denmark, Molecular Oncology, J.B. Winsl\u00f8ws Vej 25, NanoCAN, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Southern Denmark, Molecular Oncology, J.B. Winsl\u00f8ws Vej 25, NanoCAN, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087041634","display_name":"Anne-Christin Hauschild","orcid":"https://orcid.org/0000-0002-7499-4373"},"institutions":[{"id":"https://openalex.org/I4210109712","display_name":"Max Planck Institute for Informatics","ror":"https://ror.org/01w19ak89","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210109712"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hauschild, Anne-Christin","raw_affiliation_strings":["Computational Systems Biology Group, Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Systems Biology Group, Max Planck Institute for Informatics, 66123 Saarbr\u00fccken, Germany","institution_ids":["https://openalex.org/I4210109712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014389043","display_name":"Qihua Tan","orcid":"https://orcid.org/0000-0003-3194-0030"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Tan, Qihua","raw_affiliation_strings":["Clinical Institute, University of Southern Denmark, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Clinical Institute, University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Kruse, Torben A.","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Kruse, Torben A.","raw_affiliation_strings":["Lundbeckfonden Center of Excellence in Nanomedicine (NanoCAN), University of Southern Denmark, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine (NanoCAN), University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490","https://openalex.org/I4210127817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039907821","display_name":"Jan Mollenhauer","orcid":null},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]},{"id":"https://openalex.org/I4210127817","display_name":"Lundbeck Foundation","ror":"https://ror.org/03hz8wd80","country_code":"DK","type":"other","lineage":["https://openalex.org/I4210127817"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Mollenhauer, Jan","raw_affiliation_strings":["Lundbeckfonden Center of Excellence in Nanomedicine (NanoCAN), University of Southern Denmark, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lundbeckfonden Center of Excellence in Nanomedicine (NanoCAN), University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490","https://openalex.org/I4210127817"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073222532","display_name":"Jan Baumbach","orcid":"https://orcid.org/0000-0002-0282-0462"},"institutions":[{"id":"https://openalex.org/I177969490","display_name":"University of Southern Denmark","ror":"https://ror.org/03yrrjy16","country_code":"DK","type":"education","lineage":["https://openalex.org/I177969490"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Baumbach, Jan","raw_affiliation_strings":["Department of Mathematics and Computer Science (IMADA), University of Southern Denmark, 5000 Odense, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics and Computer Science (IMADA), University of Southern Denmark, 5000 Odense, Denmark","institution_ids":["https://openalex.org/I177969490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052182874","display_name":"Richa Batra","orcid":"https://orcid.org/0000-0003-3708-0086"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Batra, Richa","raw_affiliation_strings":["Institut for Matematik og Datalogi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut for Matematik og Datalogi","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.9963,"has_fulltext":true,"cited_by_count":31,"citation_normalized_percentile":{"value":0.75699906,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"11","issue":"2","first_page":"236","last_page":"236"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.387800008058548,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.387800008058548,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.2272000014781952,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10183","display_name":"Breast Cancer Treatment Studies","score":0.11309999972581863,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.7505930662155151},{"id":"https://openalex.org/keywords/epigenetics","display_name":"Epigenetics","score":0.6656239032745361},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.6065152883529663},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6055794358253479},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5845435261726379},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.5663391947746277},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4892430305480957},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.46207311749458313},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4546603858470917},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4476366639137268},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.3973449766635895},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.37912267446517944},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.339590847492218},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28400570154190063}],"concepts":[{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.7505930662155151},{"id":"https://openalex.org/C41091548","wikidata":"https://www.wikidata.org/wiki/Q26939","display_name":"Epigenetics","level":3,"score":0.6656239032745361},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.6065152883529663},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6055794358253479},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5845435261726379},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.5663391947746277},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4892430305480957},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.46207311749458313},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4546603858470917},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4476366639137268},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.3973449766635895},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.37912267446517944},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.339590847492218},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28400570154190063}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044127","descriptor_name":"Epigenesis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"pmid:24953305","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24953305","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:biecoll.ub.uni-bielefeld.de:5317","is_oa":false,"landing_page_url":"http://biecoll.ub.uni-bielefeld.de/volltexte/2014/5317/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://journal.imbio.de/article.php?aid=236","raw_type":"Journal Article"},{"id":"pmh:oai:pure.mpg.de:item_2259227","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-002A-06F4-9","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Integrative Bioinformatics","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:sdu.dk:openaire_cris_publications/23842eca-feb3-491c-8e11-4d7b60177a57","is_oa":false,"landing_page_url":"https://portal.findresearcher.sdu.dk/da/publications/23842eca-feb3-491c-8e11-4d7b60177a57","pdf_url":null,"source":{"id":"https://openalex.org/S4306400423","display_name":"University of Southern Denmark Research Portal (University of Southern Denmark)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177969490","host_organization_name":"University of Southern Denmark","host_organization_lineage":["https://openalex.org/I177969490"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"List , M , Hauschild , A-C , Tan , Q , Kruse , T A , Mollenhauer , J , Baumbach , J &amp; Batra , R 2014 , ' Classification of Breast Cancer Subtypes by combining Gene Expression and DNA Methylation Data ' , Journal of Integrative Bioinformatics , vol. 11 , no. 2 , pp. 236 . https://doi.org/10.1515/jib-2014-236","raw_type":"article"},{"id":"doi:10.2390/biecoll-jib-2014-236","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2014-236","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.2390/biecoll-jib-2014-236","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2014-236","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310490","display_name":"Villum Fonden","ror":"https://ror.org/007ww2d15"},{"id":"https://openalex.org/F4320321999","display_name":"Lundbeckfonden","ror":"https://ror.org/03hz8wd80"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320337753","display_name":"Interreg","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1520812622","https://openalex.org/W1912982817","https://openalex.org/W1954665432","https://openalex.org/W1973297229","https://openalex.org/W1982225414","https://openalex.org/W1984807040","https://openalex.org/W2018038560","https://openalex.org/W2028863688","https://openalex.org/W2032551913","https://openalex.org/W2049923776","https://openalex.org/W2075151433","https://openalex.org/W2095783009","https://openalex.org/W2096283457","https://openalex.org/W2096715243","https://openalex.org/W2097255042","https://openalex.org/W2098493765","https://openalex.org/W2106787323","https://openalex.org/W2120921048","https://openalex.org/W2127314075","https://openalex.org/W2131257577","https://openalex.org/W2131994307","https://openalex.org/W2132619562","https://openalex.org/W2133111499","https://openalex.org/W2134814440","https://openalex.org/W2146390965","https://openalex.org/W2147944526","https://openalex.org/W2593086047","https://openalex.org/W2911964244","https://openalex.org/W3151444396"],"related_works":["https://openalex.org/W2769193000","https://openalex.org/W2052674534","https://openalex.org/W2980158117","https://openalex.org/W4229068525","https://openalex.org/W779414787","https://openalex.org/W2033874367","https://openalex.org/W2124167740","https://openalex.org/W2029110662","https://openalex.org/W4289860711","https://openalex.org/W4283027398"],"abstract_inverted_index":{"Selecting":[0],"the":[1,13,48,121,130,159,168,198,206,218,232],"most":[2],"promising":[3],"treatment":[4],"strategy":[5],"for":[6,44],"breast":[7,185,242],"cancer":[8,186,243],"crucially":[9],"depends":[10],"on":[11,129,134,147,158,167,184,246],"determining":[12],"correct":[14],"subtype.":[15],"In":[16],"recent":[17],"years,":[18],"gene":[19,41,87,108,148,191,214,233],"expression":[20,42,109,149,192,215,234],"profiling":[21],"has":[22],"been":[23],"investigated":[24],"as":[25,229],"an":[26,135,247],"alternative":[27],"to":[28,40,51,73,83,114,154,163,197,223],"histochemical":[29],"methods.":[30],"Since":[31],"databases":[32],"like":[33],"TCGA":[34],"provide":[35,238],"easy":[36],"and":[37,107,150,162,178,188],"unrestricted":[38],"access":[39],"data":[43,93,110,152],"hundreds":[45],"of":[46,57,67,176,181],"patients,":[47],"challenge":[49],"is":[50],"extract":[52],"a":[53,64,70,115,155,164],"minimal":[54],"optimal":[55],"set":[56],"genes":[58,68],"with":[59],"good":[60],"prognostic":[61],"properties":[62],"from":[63,94,213],"large":[65],"bulk":[66],"making":[69],"moderate":[71],"contribution":[72],"classification.":[74],"Several":[75],"studies":[76],"have":[77],"successfully":[78],"applied":[79],"machine":[80],"learning":[81],"algorithms":[82],"solve":[84],"this":[85],"so-called":[86,140],"selection":[88],"problem.":[89],"However,":[90,217],"more":[91],"diverse":[92],"other":[95],"OMICS":[96],"technologies":[97],"are":[98],"available,":[99],"including":[100],"methylation.":[101],"We":[102,138,172],"hypothesize":[103],"that":[104],"combining":[105],"methylation":[106,151,199,219],"could":[111],"already":[112],"lead":[113],"largely":[116],"improved":[117],"classification":[118,144,179],"model,":[119,200,208,235],"since":[120],"resulting":[122],"model":[123,156,165,193,220],"will":[124],"reflect":[125],"differences":[126],"not":[127,227],"only":[128],"transcriptomic,":[131],"but":[132],"also":[133,203],"epigenetic":[136,248],"level.":[137,249],"compared":[139],"random":[141],"forest":[142],"derived":[143],"models":[145],"based":[146,157,166],"alone,":[153],"combined":[160,207],"features":[161,212,226],"gold":[169],"standard":[170],"PAM50.":[171],"obtained":[173],"bootstrap":[174],"errors":[175],"10-20%":[177],"error":[180],"1-50%,":[182],"depending":[183],"subtype":[187,244],"model.":[189],"The":[190],"was":[194,202,221],"clearly":[195],"superior":[196],"which":[201,209,236],"reflected":[204],"in":[205],"mainly":[210],"selected":[211],"data.":[216],"able":[222],"identify":[224],"unique":[225],"considered":[228],"relevant":[230],"by":[231],"might":[237],"deeper":[239],"insights":[240],"into":[241],"differentiation":[245]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
