{"id":"https://openalex.org/W2185314961","doi":"https://doi.org/10.2390/biecoll-jib-2012-190","title":"IDPredictor: predict database links in biomedical database","display_name":"IDPredictor: predict database links in biomedical database","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2185314961","doi":"https://doi.org/10.2390/biecoll-jib-2012-190","mag":"2185314961","pmid":"https://pubmed.ncbi.nlm.nih.gov/22736059"},"language":"en","primary_location":{"id":"pmid:22736059","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22736059","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},"type":"article","indexed_in":["datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2390/biecoll-jib-2012-190","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108540718","display_name":"Hendrik Mehlhorn","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127902","display_name":"Leibniz Institute of Plant Genetics and Crop Plant Research","ror":"https://ror.org/02skbsp27","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210127902"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Mehlhorn, Hendrik","raw_affiliation_strings":["Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)"],"affiliations":[{"raw_affiliation_string":"Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)","institution_ids":["https://openalex.org/I4210127902"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091392435","display_name":"Matthias Lange","orcid":"https://orcid.org/0000-0002-4316-078X"},"institutions":[{"id":"https://openalex.org/I4210127902","display_name":"Leibniz Institute of Plant Genetics and Crop Plant Research","ror":"https://ror.org/02skbsp27","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210127902"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lange, Matthias","raw_affiliation_strings":["Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)"],"affiliations":[{"raw_affiliation_string":"Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)","institution_ids":["https://openalex.org/I4210127902"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058475324","display_name":"Uwe Scholz","orcid":"https://orcid.org/0000-0001-6113-3518"},"institutions":[{"id":"https://openalex.org/I4210127902","display_name":"Leibniz Institute of Plant Genetics and Crop Plant Research","ror":"https://ror.org/02skbsp27","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210127902"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Scholz, Uwe","raw_affiliation_strings":["Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)"],"affiliations":[{"raw_affiliation_string":"Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)","institution_ids":["https://openalex.org/I4210127902"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109343398","display_name":"Falk Schreiber","orcid":null},"institutions":[{"id":"https://openalex.org/I4210127902","display_name":"Leibniz Institute of Plant Genetics and Crop Plant Research","ror":"https://ror.org/02skbsp27","country_code":"DE","type":"facility","lineage":["https://openalex.org/I315704651","https://openalex.org/I4210127902"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Schreiber, Falk","raw_affiliation_strings":["Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)"],"affiliations":[{"raw_affiliation_string":"Leibniz-Institut f\u00fcr Pflanzengenetik und Kulturpflanzenforschung (Institute of Plant Genetics and Crop Plant Research)","institution_ids":["https://openalex.org/I4210127902"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5108540718"],"corresponding_institution_ids":["https://openalex.org/I4210127902"],"apc_list":null,"apc_paid":null,"fwci":0.4034,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.63501905,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"9","issue":"2","first_page":"190","last_page":"190"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7772244215011597},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6557083129882812},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5726149678230286},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5253649950027466},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.48235052824020386},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4415142834186554},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.43809324502944946},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34559041261672974},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.15337246656417847},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09949707984924316}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7772244215011597},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6557083129882812},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5726149678230286},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5253649950027466},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.48235052824020386},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4415142834186554},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.43809324502944946},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34559041261672974},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.15337246656417847},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09949707984924316},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"pmid:22736059","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22736059","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:biecoll.ub.uni-bielefeld.de:5218","is_oa":false,"landing_page_url":"http://biecoll.ub.uni-bielefeld.de/volltexte/2012/5218/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://journal.imbio.de/article.php?aid=190","raw_type":"Journal Article"},{"id":"pmh:oai:kops.uni-konstanz.de:123456789/38616","is_oa":false,"landing_page_url":"http://nbn-resolving.de/urn:nbn:de:bsz:352-0-396389","pdf_url":null,"source":{"id":"https://openalex.org/S4306401487","display_name":"KOPS (University of Konstanz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189712700","host_organization_name":"University of Konstanz","host_organization_lineage":["https://openalex.org/I189712700"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Integrative Bioinformatics - JIB ; 9,2. 2012, 190. eISSN 1613-4516. Available under: doi: 10.2390/biecoll-jib-2012-190","raw_type":"doc-type:Text"},{"id":"doi:10.2390/biecoll-jib-2012-190","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2012-190","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.2390/biecoll-jib-2012-190","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2012-190","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1881863634","display_name":"Trans-national Infrastructure for Plant Genomic Science","funder_award_id":"283496","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G645663373","display_name":null,"funder_award_id":"7th Framework","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W166100103","https://openalex.org/W1509844421","https://openalex.org/W1573503290","https://openalex.org/W1995330620","https://openalex.org/W2024012132","https://openalex.org/W2054251921","https://openalex.org/W2075203604","https://openalex.org/W2081580037","https://openalex.org/W2103487267","https://openalex.org/W2108934940","https://openalex.org/W2123329045","https://openalex.org/W2128964720","https://openalex.org/W2130253098","https://openalex.org/W2135163167","https://openalex.org/W2156467546","https://openalex.org/W2158714788","https://openalex.org/W2159482845","https://openalex.org/W2162136032","https://openalex.org/W2162965868","https://openalex.org/W2432567885","https://openalex.org/W3121926921"],"related_works":["https://openalex.org/W1892467659","https://openalex.org/W151193258","https://openalex.org/W77472803","https://openalex.org/W2170576704","https://openalex.org/W2472885054","https://openalex.org/W2904651995","https://openalex.org/W2106483935","https://openalex.org/W2133414337","https://openalex.org/W2470124677","https://openalex.org/W856118630"],"abstract_inverted_index":{"Knowledge":[0],"found":[1],"in":[2,5,7,24,39,77,95,155],"biomedical":[3,158],"databases,":[4,36],"particular":[6,157],"Web":[8],"information":[9,78],"systems,":[10],"is":[11,21,31,86,127,138,177,214,221,228],"a":[12,25,56,73,107,146,181],"major":[13],"bioinformatics":[14],"resource.":[15],"In":[16,161],"general,":[17],"this":[18,162],"biological":[19],"knowledge":[20,109],"worldwide":[22],"represented":[23],"network":[26,176],"of":[27,35,59,93,105,112,118,122,148,172,203],"databases.":[28,115],"These":[29],"data":[30,52,75,96,125,175,196],"spread":[32],"among":[33,133],"thousands":[34],"which":[37,220],"overlap":[38],"content,":[40],"but":[41,102],"differ":[42],"substantially":[43],"with":[44],"respect":[45],"to":[46,84,128,166],"content":[47],"detail,":[48],"interface,":[49],"formats":[50],"and":[51,185,193,206,227],"structure.":[53],"To":[54],"support":[55],"functional":[57],"annotation":[58],"lab":[60],"data,":[61],"such":[62],"as":[63,70,72,216],"protein":[64],"sequences,":[65],"metabolites":[66],"or":[67],"DNA":[68],"sequences":[69],"well":[71],"semi-automated":[74],"exploration":[76],"retrieval":[79,97,201],"environments,":[80],"an":[81,123,169,173],"integrated":[82,124,174],"view":[83,126],"databases":[85,192],"essential.":[87],"Search":[88],"engines":[89],"have":[90],"the":[91,113,120,142,156,200,217,224,232],"potential":[92],"assisting":[94],"from":[98,188],"these":[99],"structured":[100],"sources,":[101],"fall":[103],"short":[104],"providing":[106],"comprehensive":[108],"except":[110],"out":[111],"interlinked":[114],"A":[116],"prerequisite":[117],"supporting":[119],"concept":[121],"acquire":[129],"insights":[130],"into":[131],"cross-references":[132,151,187],"database":[134],"entities.":[135],"This":[136],"issue":[137],"being":[139],"hampered":[140],"by":[141],"fact,":[143],"that":[144,183],"only":[145],"fraction":[147],"all":[149],"possible":[150,194],"are":[152],"explicitely":[153],"tagged":[154],"informations":[159],"systems.":[160],"work,":[163],"we":[164],"investigate":[165],"what":[167],"extend":[168],"automated":[170],"construction":[171],"possible.":[178],"We":[179,198],"propose":[180],"method":[182,205,213],"predicts":[184],"extracts":[186],"multiple":[189],"life":[190],"science":[191],"referenced":[195],"targets.":[197],"study":[199],"quality":[202],"our":[204],"report":[207],"on":[208],"first,":[209],"promising":[210],"results.":[211],"The":[212],"implemented":[215],"tool":[218],"IDPredictor,":[219],"published":[222],"under":[223],"DOI":[225],"10.5447/IPK/2012/4":[226],"freely":[229],"available":[230],"using":[231],"URL:":[233],"http://dx.doi.org/10.5447/IPK/2012/4.":[234]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
