{"id":"https://openalex.org/W122736534","doi":"https://doi.org/10.2390/biecoll-jib-2010-127","title":"Comparison and Integration of Target Prediction Algorithms for microRNA Studies","display_name":"Comparison and Integration of Target Prediction Algorithms for microRNA Studies","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W122736534","doi":"https://doi.org/10.2390/biecoll-jib-2010-127","mag":"122736534","pmid":"https://pubmed.ncbi.nlm.nih.gov/20375447"},"language":"en","primary_location":{"id":"pmid:20375447","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20375447","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},"type":"article","indexed_in":["datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2390/biecoll-jib-2010-127","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026036572","display_name":"Yanju Zhang","orcid":"https://orcid.org/0000-0002-4475-1135"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Zhang, Yanju","raw_affiliation_strings":["Section Imaging and BioInformatics, Leiden Institute of Advanced Computer Science,Leiden University, The Netherlands. yanju@liacs.nl"],"affiliations":[{"raw_affiliation_string":"Section Imaging and BioInformatics, Leiden Institute of Advanced Computer Science,Leiden University, The Netherlands. yanju@liacs.nl","institution_ids":["https://openalex.org/I121797337"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022631255","display_name":"Fons J. Verbeek","orcid":"https://orcid.org/0000-0003-2445-8158"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Verbeek, Fons J.","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5026036572"],"corresponding_institution_ids":["https://openalex.org/I121797337"],"apc_list":null,"apc_paid":null,"fwci":2.1537,"has_fulltext":false,"cited_by_count":59,"citation_normalized_percentile":{"value":0.87575305,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"7","issue":"3","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.748992919921875},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5882094502449036},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5630802512168884},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5582103133201599},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5210705995559692},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.5109335780143738},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.5099970102310181},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4372013211250305},{"id":"https://openalex.org/keywords/bayesian-network","display_name":"Bayesian network","score":0.436229407787323},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41296079754829407}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.748992919921875},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5882094502449036},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5630802512168884},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5582103133201599},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5210705995559692},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.5109335780143738},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.5099970102310181},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4372013211250305},{"id":"https://openalex.org/C33724603","wikidata":"https://www.wikidata.org/wiki/Q812540","display_name":"Bayesian network","level":2,"score":0.436229407787323},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41296079754829407},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":4,"locations":[{"id":"pmid:20375447","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20375447","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of integrative bioinformatics","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.457.7034","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.457.7034","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://journal.imbio.de/articles/pdf/jib-127.pdf","raw_type":"text"},{"id":"pmh:oai:biecoll.ub.uni-bielefeld.de:5027","is_oa":false,"landing_page_url":"http://biecoll.ub.uni-bielefeld.de/volltexte/2010/5027/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://journal.imbio.de/article.php?aid=127","raw_type":"Journal Article"},{"id":"doi:10.2390/biecoll-jib-2010-127","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2010-127","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.2390/biecoll-jib-2010-127","is_oa":true,"landing_page_url":"https://doi.org/10.2390/biecoll-jib-2010-127","pdf_url":null,"source":{"id":"https://openalex.org/S4306401670","display_name":"PUB \u2013 Publications at Bielefeld University (Bielefeld University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I20121455","host_organization_name":"Bielefeld University","host_organization_lineage":["https://openalex.org/I20121455"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article-journal"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1495061682","https://openalex.org/W1890374229","https://openalex.org/W1995023661","https://openalex.org/W2013282470","https://openalex.org/W2017199818","https://openalex.org/W2024990640","https://openalex.org/W2032766715","https://openalex.org/W2042651042","https://openalex.org/W2062862623","https://openalex.org/W2083381199","https://openalex.org/W2090219560","https://openalex.org/W2094253263","https://openalex.org/W2103760949","https://openalex.org/W2105197182","https://openalex.org/W2114268578","https://openalex.org/W2117431427","https://openalex.org/W2120456037","https://openalex.org/W2123504579","https://openalex.org/W2158698691","https://openalex.org/W2160232885","https://openalex.org/W2160913143","https://openalex.org/W2163199119","https://openalex.org/W2170112109","https://openalex.org/W2966207845"],"related_works":["https://openalex.org/W2083381199","https://openalex.org/W2162674813","https://openalex.org/W2120456037","https://openalex.org/W2149785901","https://openalex.org/W144423133","https://openalex.org/W2026570544","https://openalex.org/W2138664009","https://openalex.org/W2094253263","https://openalex.org/W2059073003","https://openalex.org/W2050869737","https://openalex.org/W2014946489","https://openalex.org/W2159793493","https://openalex.org/W2077327925","https://openalex.org/W2154085311","https://openalex.org/W2116661471","https://openalex.org/W2041509376","https://openalex.org/W2040191060","https://openalex.org/W2101117089","https://openalex.org/W2065831401","https://openalex.org/W2017426710"],"abstract_inverted_index":{"microRNAs":[0],"are":[1,47,70],"short":[2],"RNA":[3],"fragments":[4],"that":[5,87],"have":[6,35],"the":[7,107,114],"capacity":[8],"of":[9,12,20,30,54,109],"regulating":[10],"hundreds":[11],"target":[13,26,32,67,123],"gene":[14],"expression.":[15],"Currently,":[16],"due":[17],"to":[18],"lack":[19],"high-throughput":[21],"experimental":[22],"methods":[23,120],"for":[24],"miRNA":[25],"identification,":[27],"a":[28],"collection":[29],"computational":[31],"prediction":[33,57,68,90,119,124],"approaches":[34,40],"been":[36],"developed.":[37],"However,":[38],"these":[39],"deal":[41],"with":[42],"different":[43,99,104],"features":[44,115],"or":[45],"factors":[46],"weighted":[48],"differently":[49],"resulting":[50],"in":[51],"diverse":[52],"range":[53],"predictions.":[55],"The":[56],"accuracy":[58],"remains":[59],"uncertain.":[60],"In":[61],"this":[62],"paper,":[63],"three":[64],"commonly":[65],"used":[66],"algorithms":[69],"evaluated":[71],"and":[72,80],"further":[73],"integrated":[74],"using":[75],"algorithm":[76,91],"combination,":[77],"ranking":[78],"aggregation":[79],"Bayesian":[81,110],"Network":[82,111],"classification.":[83],"Our":[84],"results":[85],"revealed":[86],"each":[88],"individual":[89],"displays":[92],"its":[93],"advantages":[94],"as":[95],"was":[96],"shown":[97],"on":[98,113],"test":[100],"data":[101],"sets.":[102],"Among":[103],"integration":[105],"strategies,":[106],"application":[108],"classifier":[112],"calculated":[116],"from":[117],"multiple":[118],"significantly":[121],"improved":[122],"accuracy.":[125]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":10},{"year":2014,"cited_by_count":11},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
