{"id":"https://openalex.org/W4362684507","doi":"https://doi.org/10.2352/ei.2023.35.11.hpci-237","title":"Clinical validation of rapid GPU-enabled DTI tractography of the brain","display_name":"Clinical validation of rapid GPU-enabled DTI tractography of the brain","publication_year":2023,"publication_date":"2023-01-16","ids":{"openalex":"https://openalex.org/W4362684507","doi":"https://doi.org/10.2352/ei.2023.35.11.hpci-237"},"language":"en","primary_location":{"id":"doi:10.2352/ei.2023.35.11.hpci-237","is_oa":true,"landing_page_url":"http://dx.doi.org/10.2352/ei.2023.35.11.hpci-237","pdf_url":"https://library.imaging.org/admin/apis/public/api/ist/website/downloadArticle/ei/35/11/HPCI-237","source":{"id":"https://openalex.org/S4210227276","display_name":"Electronic Imaging","issn_l":"2470-1173","issn":["2470-1173"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Electronic Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://library.imaging.org/admin/apis/public/api/ist/website/downloadArticle/ei/35/11/HPCI-237","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021379121","display_name":"Felix Liu","orcid":"https://orcid.org/0000-0001-8288-2817"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Felix Liu","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078699111","display_name":"Vanitha Sankaranarayanan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vanitha Sankaranarayanan","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050968882","display_name":"Javier Villanueva\u2010Meyer","orcid":"https://orcid.org/0000-0002-1212-4233"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Javier Villanueva-Meyer","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038354675","display_name":"Shawn L. Hervey\u2010Jumper","orcid":"https://orcid.org/0000-0003-4699-260X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shawn Hervey-Jumper","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110884905","display_name":"James W. Hawkins","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"James Hawkins","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065822967","display_name":"Pablo F. Damasceno","orcid":"https://orcid.org/0000-0001-5615-121X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pablo Damasceno","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031617537","display_name":"Mauro Bisson","orcid":"https://orcid.org/0000-0002-3025-8227"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mauro Bisson","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066986761","display_name":"Josh Romero","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Josh Romero","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051695509","display_name":"Thorsten Kurth","orcid":"https://orcid.org/0000-0003-0832-6198"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Thorsten Kurth","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079530787","display_name":"Massimiliano Fatica","orcid":"https://orcid.org/0000-0002-5839-1644"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Massimiliano Fatica","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017713150","display_name":"Eleftherios Garyfallidis","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eleftherios Garyfallidis","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057244887","display_name":"Ariel Rokem","orcid":"https://orcid.org/0000-0003-0679-1985"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ariel Rokem","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009379594","display_name":"Jason C. Crane","orcid":"https://orcid.org/0000-0002-1145-5639"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jason C. Crane","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5043462798","display_name":"Sharmila Majumdar","orcid":"https://orcid.org/0000-0002-0201-871X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sharmila Majumdar","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":14,"corresponding_author_ids":["https://openalex.org/A5021379121"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.14058413,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"35","issue":"11","first_page":"237","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11304","display_name":"Advanced Neuroimaging Techniques and Applications","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12552","display_name":"Fetal and Pediatric Neurological Disorders","score":0.9728999733924866,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tractography","display_name":"Tractography","score":0.8973978757858276},{"id":"https://openalex.org/keywords/diffusion-mri","display_name":"Diffusion MRI","score":0.6822839379310608},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6212061643600464},{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.5666905045509338},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4480309784412384},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.4425016939640045},{"id":"https://openalex.org/keywords/white-matter","display_name":"White matter","score":0.4235495328903198},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40629756450653076},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.3613511323928833},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.24387556314468384},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.22175383567810059},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18832340836524963}],"concepts":[{"id":"https://openalex.org/C84787856","wikidata":"https://www.wikidata.org/wiki/Q3076659","display_name":"Tractography","level":4,"score":0.8973978757858276},{"id":"https://openalex.org/C149550507","wikidata":"https://www.wikidata.org/wiki/Q899360","display_name":"Diffusion MRI","level":3,"score":0.6822839379310608},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6212061643600464},{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.5666905045509338},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4480309784412384},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.4425016939640045},{"id":"https://openalex.org/C2781192897","wikidata":"https://www.wikidata.org/wiki/Q822050","display_name":"White matter","level":3,"score":0.4235495328903198},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40629756450653076},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.3613511323928833},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.24387556314468384},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.22175383567810059},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18832340836524963},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.2352/ei.2023.35.11.hpci-237","is_oa":true,"landing_page_url":"http://dx.doi.org/10.2352/ei.2023.35.11.hpci-237","pdf_url":"https://library.imaging.org/admin/apis/public/api/ist/website/downloadArticle/ei/35/11/HPCI-237","source":{"id":"https://openalex.org/S4210227276","display_name":"Electronic Imaging","issn_l":"2470-1173","issn":["2470-1173"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Electronic Imaging","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.2352/ei.2023.35.11.hpci-237","is_oa":true,"landing_page_url":"http://dx.doi.org/10.2352/ei.2023.35.11.hpci-237","pdf_url":"https://library.imaging.org/admin/apis/public/api/ist/website/downloadArticle/ei/35/11/HPCI-237","source":{"id":"https://openalex.org/S4210227276","display_name":"Electronic Imaging","issn_l":"2470-1173","issn":["2470-1173"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Electronic Imaging","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4362684507.pdf","grobid_xml":"https://content.openalex.org/works/W4362684507.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2327564191","https://openalex.org/W57104752","https://openalex.org/W2364198307","https://openalex.org/W2376425756","https://openalex.org/W2001037511","https://openalex.org/W2391066511","https://openalex.org/W2000186706","https://openalex.org/W1977760756","https://openalex.org/W2068008866","https://openalex.org/W2142608172"],"abstract_inverted_index":{"Diffusion":[0],"tensor":[1],"imaging":[2,9,70],"(DTI)":[3],"is":[4,28,64,80],"a":[5,20,125],"non-invasive":[6],"magnetic":[7],"resonance":[8],"(MRI)":[10],"modality":[11],"used":[12],"to":[13,44,54,96,135,149,178],"map":[14],"white":[15],"matter":[16],"fiber":[17,56],"tracts":[18],"for":[19,32,111,128],"variety":[21],"of":[22,26,99,151,157],"clinical":[23],"applications;":[24],"one":[25],"which":[27,131],"aiding":[29],"preoperative":[30],"assessments":[31],"tumor":[33],"patients.":[34],"DTI":[35],"requires":[36,94],"numerical":[37],"computations":[38,107],"on":[39,102],"multiple":[40],"diffusion":[41,46],"weighted":[42],"images":[43],"calculate":[45],"tensors":[47],"at":[48,187],"each":[49],"voxel":[50],"and":[51,71,77,91,93,121,154,174],"probabilistic":[52],"tracking&lt;sup&gt;1&lt;/sup&gt;":[53],"construct":[55],"tracts,":[57],"or":[58],"tractography.":[59,114],"Greater":[60],"accuracy":[61],"in":[62,162,171,185],"tractography":[63,146,170,183],"possible":[65],"with":[66,153,159],"larger,":[67],"more":[68],"advanced":[69,78],"reconstruction":[72,79,142],"algorithms.":[73],"However,":[74],"larger":[75],"scans":[76],"often":[81],"computationally":[82],"intensive.":[83],"The":[84],"post-processing":[85],"pipeline":[86],"involves":[87],"significant":[88],"computational":[89],"resources":[90],"time":[92,101,110],"up":[95],"40":[97],"minutes":[98],"computation":[100],"state-of-the-art":[103],"hardware.":[104],"Parallel":[105],"GPU":[106],"can":[108],"improve":[109],"the":[112,137,179],"resource-intensive":[113],"A":[115],"collaborative":[116],"team":[117],"from":[118],"DIPY,":[119],"NVIDIA,":[120],"UCSF":[122],"recently":[123],"developed":[124],"tool,":[126],"GPUStreamlines,":[127],"GPU-enabled":[129,145,169],"tractography&lt;sup&gt;2&lt;/sup&gt;":[130],"has":[132],"been":[133],"expanded":[134],"support":[136],"constant":[138],"solid":[139],"angle":[140],"(CSA)":[141],"algorithm&lt;sup&gt;3&lt;/sup&gt;.":[143],"This":[144],"was":[147],"applied":[148],"MRIs":[150],"brains":[152],"without":[155],"presence":[156],"lesions,":[158],"substantial":[160],"increases":[161],"processing":[163],"speed.":[164],"We":[165],"demonstrate":[166],"that":[167],"CSA":[168],"normal":[172],"controls":[173],"patients":[175],"are":[176],"comparable":[177],"existing":[180],"gold":[181],"standard":[182],"currently":[184],"place":[186],"UCSF.":[188]},"counts_by_year":[],"updated_date":"2026-03-13T14:20:09.374765","created_date":"2025-10-10T00:00:00"}
