{"id":"https://openalex.org/W1800737232","doi":"https://doi.org/10.2312/vg/vg01/253-267","title":"Segmentation of Biological Volume Datasets Using a Level-Set Framework","display_name":"Segmentation of Biological Volume Datasets Using a Level-Set Framework","publication_year":2001,"publication_date":"2001-01-01","ids":{"openalex":"https://openalex.org/W1800737232","doi":"https://doi.org/10.2312/vg/vg01/253-267","mag":"1800737232"},"language":"en","primary_location":{"id":"pmh:oai:CiteSeerX.psu:10.1.1.22.7855","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.22.7855","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.gg.caltech.edu/pub/david/VG01_chapter.pdf","raw_type":"text"},"type":"article","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2312/vg/vg01/253-267","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109840277","display_name":"Ross Whitaker","orcid":null},"institutions":[{"id":"https://openalex.org/I223532165","display_name":"University of Utah","ror":"https://ror.org/03r0ha626","country_code":"US","type":"education","lineage":["https://openalex.org/I223532165"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Whitaker, Ross","raw_affiliation_strings":["[School of Computing University of Utah, Salt Lake City, UT]"],"affiliations":[{"raw_affiliation_string":"[School of Computing University of Utah, Salt Lake City, UT]","institution_ids":["https://openalex.org/I223532165"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061644705","display_name":"David E. Breen","orcid":"https://orcid.org/0000-0002-1376-5008"},"institutions":[{"id":"https://openalex.org/I122411786","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055","country_code":"US","type":"education","lineage":["https://openalex.org/I122411786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Breen, David","raw_affiliation_strings":["Computer Science Department, California Institute of Technology, Pasadena, CA"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, California Institute of Technology, Pasadena, CA","institution_ids":["https://openalex.org/I122411786"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034723250","display_name":"Ken Museth","orcid":"https://orcid.org/0000-0002-9926-780X"},"institutions":[{"id":"https://openalex.org/I122411786","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055","country_code":"US","type":"education","lineage":["https://openalex.org/I122411786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Museth, Ken","raw_affiliation_strings":["Computer Science Department, California Institute of Technology, Pasadena, CA"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, California Institute of Technology, Pasadena, CA","institution_ids":["https://openalex.org/I122411786"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037900079","display_name":"Neha Soni","orcid":"https://orcid.org/0000-0001-5184-9301"},"institutions":[{"id":"https://openalex.org/I122411786","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055","country_code":"US","type":"education","lineage":["https://openalex.org/I122411786"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Soni, Neha","raw_affiliation_strings":["Computer Science Department, California Institute of Technology, Pasadena, CA"],"affiliations":[{"raw_affiliation_string":"Computer Science Department, California Institute of Technology, Pasadena, CA","institution_ids":["https://openalex.org/I122411786"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5109840277"],"corresponding_institution_ids":["https://openalex.org/I223532165"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":26,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"253","last_page":"268"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10481","display_name":"Computer Graphics and Visualization Techniques","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1704","display_name":"Computer Graphics and Computer-Aided Design"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10719","display_name":"3D Shape Modeling and Analysis","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/2206","display_name":"Computational Mechanics"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/initialization","display_name":"Initialization","score":0.8799000978469849},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7491045594215393},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6892408728599548},{"id":"https://openalex.org/keywords/volume","display_name":"Volume (thermodynamics)","score":0.655927300453186},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6492296457290649},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5748034119606018},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5646808743476868},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.5281168222427368},{"id":"https://openalex.org/keywords/level-set","display_name":"Level set (data structures)","score":0.5049939751625061},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.502823531627655},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.502509593963623},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4878978431224823},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.45046326518058777},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.43399810791015625}],"concepts":[{"id":"https://openalex.org/C114466953","wikidata":"https://www.wikidata.org/wiki/Q6034165","display_name":"Initialization","level":2,"score":0.8799000978469849},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7491045594215393},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6892408728599548},{"id":"https://openalex.org/C20556612","wikidata":"https://www.wikidata.org/wiki/Q4469374","display_name":"Volume (thermodynamics)","level":2,"score":0.655927300453186},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6492296457290649},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5748034119606018},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5646808743476868},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.5281168222427368},{"id":"https://openalex.org/C153008295","wikidata":"https://www.wikidata.org/wiki/Q6535093","display_name":"Level set (data structures)","level":2,"score":0.5049939751625061},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.502823531627655},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.502509593963623},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4878978431224823},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.45046326518058777},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.43399810791015625},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"pmh:oai:CiteSeerX.psu:10.1.1.22.7855","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.22.7855","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.gg.caltech.edu/pub/david/VG01_chapter.pdf","raw_type":"text"},{"id":"doi:10.2312/vg/vg01/253-267","is_oa":true,"landing_page_url":"https://doi.org/10.2312/vg/vg01/253-267","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"},{"id":"mag:1800737232","is_oa":false,"landing_page_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-7091-6756-4_17.pdf","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":"Eurographics","raw_type":null}],"best_oa_location":{"id":"doi:10.2312/vg/vg01/253-267","is_oa":true,"landing_page_url":"https://doi.org/10.2312/vg/vg01/253-267","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W128740237","https://openalex.org/W1512148629","https://openalex.org/W1516517100","https://openalex.org/W1977574189","https://openalex.org/W1991113069","https://openalex.org/W2027644430","https://openalex.org/W2031675154","https://openalex.org/W2038091466","https://openalex.org/W2039005177","https://openalex.org/W2039136787","https://openalex.org/W2045618004","https://openalex.org/W2054113582","https://openalex.org/W2058796276","https://openalex.org/W2069754093","https://openalex.org/W2084311783","https://openalex.org/W2096153679","https://openalex.org/W2100588603","https://openalex.org/W2112030171","https://openalex.org/W2116175081","https://openalex.org/W2119231080","https://openalex.org/W2119807014","https://openalex.org/W2120959665","https://openalex.org/W2129143463","https://openalex.org/W2132934990","https://openalex.org/W2140717750","https://openalex.org/W2142054519","https://openalex.org/W2145023731","https://openalex.org/W2149184914","https://openalex.org/W2157229455","https://openalex.org/W2167407599","https://openalex.org/W2229412420","https://openalex.org/W2295355433","https://openalex.org/W2912067802","https://openalex.org/W2998023265","https://openalex.org/W3043312046"],"related_works":["https://openalex.org/W1991113069","https://openalex.org/W2149184914","https://openalex.org/W2104095591","https://openalex.org/W2116040950","https://openalex.org/W1977946246","https://openalex.org/W145507996","https://openalex.org/W2998023265","https://openalex.org/W2144133758","https://openalex.org/W2114487471","https://openalex.org/W2093834886","https://openalex.org/W2087199268","https://openalex.org/W2094856190","https://openalex.org/W376690360","https://openalex.org/W2121462936","https://openalex.org/W1968991373","https://openalex.org/W1525311021","https://openalex.org/W2170977910","https://openalex.org/W1536259931","https://openalex.org/W2937904493","https://openalex.org/W2509481584"],"abstract_inverted_index":{"This":[0,123],"paper":[1],"presents":[2],"a":[3,10,56,105,128,138,142],"framework":[4],"for":[5,111],"extracting":[6],"surface":[7],"models":[8],"from":[9,20,59],"broad":[11],"variety":[12,143],"of":[13,30,103,107,125,137,144],"volume":[14,58],"datasets.":[15],"These":[16],"datasets":[17],"are":[18,26,80],"produced":[19],"standard":[21],"3D":[22],"imaging":[23],"devices,":[24],"and":[25,39,113],"all":[27],"noisy":[28],"samplings":[29],"complex":[31],"biological":[32],"structures":[33],"with":[34,71,87],"boundaries":[35],"that":[36,130],"have":[37],"low":[38],"often":[40],"varying":[41],"contrasts.":[42],"The":[43],"level":[44,76,98,120],"set":[45,77,99,106,121],"segmentation":[46,100],"method,":[47],"which":[48],"is":[49],"well":[50],"documented":[51],"in":[52,91,118],"the":[53,60,119,135],"literature,":[54],"creates":[55],"new":[57],"input":[61],"data":[62],"by":[63],"solving":[64],"an":[65],"initial-value":[66],"partial":[67],"differential":[68],"equation":[69],"(PDE)":[70],"user-defined":[72],"feature-extracting":[73,116],"terms.":[74],"However,":[75],"deformations":[78],"alone":[79],"not":[81],"sufficient,":[82],"they":[83],"must":[84],"be":[85,132],"combined":[86],"powerful":[88],"initialization":[89,112],"techniques":[90,110,126],"order":[92],"to":[93,140],"produce":[94],"successful":[95],"segmentations.":[96],"Our":[97],"approach":[101],"consists":[102],"defining":[104],"suitable":[108],"pre-processing":[109],"selecting/tuning":[114],"different":[115],"terms":[117],"algorithm.":[122],"collection":[124],"forms":[127],"toolkit":[129],"can":[131],"applied,":[133],"under":[134],"guidance":[136],"user,":[139],"segment":[141],"volumetric":[145],"data.":[146]},"counts_by_year":[{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
