{"id":"https://openalex.org/W6963808132","doi":"https://doi.org/10.2312/vcbm.20221189","title":"Polyp-Cavity Segmentation of Cold-Water Corals guided by Ambient Occlusion and Ambient Curvature","display_name":"Polyp-Cavity Segmentation of Cold-Water Corals guided by Ambient Occlusion and Ambient Curvature","publication_year":2022,"publication_date":"2022-01-01","ids":{"openalex":"https://openalex.org/W6963808132","doi":"https://doi.org/10.2312/vcbm.20221189"},"language":"en","primary_location":{"id":"doi:10.2312/vcbm.20221189","is_oa":true,"landing_page_url":"https://doi.org/10.2312/vcbm.20221189","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":""},"type":"article","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2312/vcbm.20221189","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Schmitt, Kira","orcid":"https://orcid.org/0009-0000-0385-0404"},"institutions":[{"id":"https://openalex.org/I195893171","display_name":"Zuse Institute Berlin","ror":"https://ror.org/02eva5865","country_code":"DE","type":"facility","lineage":["https://openalex.org/I195893171"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Schmitt, Kira","raw_affiliation_strings":["Zuse Institute Berlin, Germany"],"raw_orcid":"https://orcid.org/0009-0000-0385-0404","affiliations":[{"raw_affiliation_string":"Zuse Institute Berlin, Germany","institution_ids":["https://openalex.org/I195893171"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Tit\u00adschack, J\u00fcr\u00adgen","orcid":"https://orcid.org/0000-0001-9373-9688"},"institutions":[{"id":"https://openalex.org/I180437899","display_name":"University of Bremen","ror":"https://ror.org/04ers2y35","country_code":"DE","type":"education","lineage":["https://openalex.org/I180437899"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tit\u00adschack, J\u00fcr\u00adgen","raw_affiliation_strings":["MARUM - Center for Marine Environmental Sciences, University of Bremen, Germany"],"raw_orcid":"https://orcid.org/0000-0001-9373-9688","affiliations":[{"raw_affiliation_string":"MARUM - Center for Marine Environmental Sciences, University of Bremen, Germany","institution_ids":["https://openalex.org/I180437899"]}]},{"author_position":"last","author":{"id":null,"display_name":"Baum, Daniel","orcid":"https://orcid.org/0000-0003-1550-7245"},"institutions":[{"id":"https://openalex.org/I195893171","display_name":"Zuse Institute Berlin","ror":"https://ror.org/02eva5865","country_code":"DE","type":"facility","lineage":["https://openalex.org/I195893171"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Baum, Daniel","raw_affiliation_strings":["Zuse Institute Berlin (ZIB), Germany"],"raw_orcid":"https://orcid.org/0000-0003-1550-7245","affiliations":[{"raw_affiliation_string":"Zuse Institute Berlin (ZIB), Germany","institution_ids":["https://openalex.org/I195893171"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I195893171"],"apc_list":null,"apc_paid":null,"fwci":0.6793,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.72479039,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.6122999787330627,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10341","display_name":"Coral and Marine Ecosystems Studies","score":0.6122999787330627,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11643","display_name":"Building materials and conservation","score":0.025800000876188278,"subfield":{"id":"https://openalex.org/subfields/1904","display_name":"Earth-Surface Processes"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.01640000008046627,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/voxel","display_name":"Voxel","score":0.6920999884605408},{"id":"https://openalex.org/keywords/curvature","display_name":"Curvature","score":0.6794000267982483},{"id":"https://openalex.org/keywords/object","display_name":"Object (grammar)","score":0.5662000179290771},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5460000038146973},{"id":"https://openalex.org/keywords/ambient-noise-level","display_name":"Ambient noise level","score":0.4855000078678131},{"id":"https://openalex.org/keywords/medial-axis","display_name":"Medial axis","score":0.4311000108718872},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4196999967098236},{"id":"https://openalex.org/keywords/gaussian-curvature","display_name":"Gaussian curvature","score":0.35920000076293945}],"concepts":[{"id":"https://openalex.org/C54170458","wikidata":"https://www.wikidata.org/wiki/Q663554","display_name":"Voxel","level":2,"score":0.6920999884605408},{"id":"https://openalex.org/C195065555","wikidata":"https://www.wikidata.org/wiki/Q214881","display_name":"Curvature","level":2,"score":0.6794000267982483},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6136999726295471},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6074000000953674},{"id":"https://openalex.org/C2781238097","wikidata":"https://www.wikidata.org/wiki/Q175026","display_name":"Object (grammar)","level":2,"score":0.5662000179290771},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5460000038146973},{"id":"https://openalex.org/C205312793","wikidata":"https://www.wikidata.org/wiki/Q16002801","display_name":"Ambient noise level","level":3,"score":0.4855000078678131},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48330000042915344},{"id":"https://openalex.org/C185877587","wikidata":"https://www.wikidata.org/wiki/Q1757407","display_name":"Medial axis","level":2,"score":0.4311000108718872},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4196999967098236},{"id":"https://openalex.org/C16140857","wikidata":"https://www.wikidata.org/wiki/Q945953","display_name":"Gaussian curvature","level":3,"score":0.35920000076293945},{"id":"https://openalex.org/C201638289","wikidata":"https://www.wikidata.org/wiki/Q457396","display_name":"Ambient intelligence","level":2,"score":0.3589000105857849},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.33730000257492065},{"id":"https://openalex.org/C157202957","wikidata":"https://www.wikidata.org/wiki/Q1659609","display_name":"Image warping","level":2,"score":0.33489999175071716},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3312000036239624},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.31380000710487366},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.3122999966144562},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.30730000138282776},{"id":"https://openalex.org/C143020374","wikidata":"https://www.wikidata.org/wiki/Q2411228","display_name":"Coral","level":2,"score":0.29429998993873596},{"id":"https://openalex.org/C73621898","wikidata":"https://www.wikidata.org/wiki/Q2940504","display_name":"Distance transform","level":3,"score":0.27489998936653137},{"id":"https://openalex.org/C98083399","wikidata":"https://www.wikidata.org/wiki/Q3246517","display_name":"Underwater","level":2,"score":0.2662000060081482},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.257999986410141},{"id":"https://openalex.org/C199631012","wikidata":"https://www.wikidata.org/wiki/Q205034","display_name":"Perpendicular","level":2,"score":0.2563000023365021},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.2547000050544739},{"id":"https://openalex.org/C159620131","wikidata":"https://www.wikidata.org/wiki/Q1938983","display_name":"Spatial analysis","level":2,"score":0.2531000077724457}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.2312/vcbm.20221189","is_oa":true,"landing_page_url":"https://doi.org/10.2312/vcbm.20221189","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":""}],"best_oa_location":{"id":"doi:10.2312/vcbm.20221189","is_oa":true,"landing_page_url":"https://doi.org/10.2312/vcbm.20221189","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":""},"sustainable_development_goals":[{"display_name":"Life below water","id":"https://metadata.un.org/sdg/14","score":0.7382651567459106}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"The":[0],"segmentation":[1],"of":[2,7,23,126,184,191,211],"cavities":[3,16,143],"in":[4,29,162,174,197],"three-dimensional":[5],"images":[6],"arbitrary":[8],"objects":[9],"is":[10,56,62,89,214,223],"a":[11,36,40,54,70,78,92,163,169,175],"difficult":[12],"problem":[13],"since":[14],"the":[15,21,24,33,43,50,84,96,102,124,148,155,182,209],"are":[17,74],"usually":[18],"connected":[19],"to":[20,39,46,69,83,91,111,114,133,139,203,226,233,245],"outside":[22,44,85],"object":[25,59],"without":[26],"any":[27,235],"difference":[28],"image":[30],"intensity.":[31],"Hence,":[32],"information":[34,109,161],"whether":[35],"voxel":[37,55,67,79],"belongs":[38,68],"cavity":[41,178],"or":[42],"needs":[45,110],"be":[47,112,230],"derived":[48],"from":[49,168],"ambient":[51,127,149,156,160,212],"space.":[52],"If":[53],"enclosed":[57],"by":[58,95,144],"material,":[60],"it":[61,88,138,146,244],"very":[63,192],"likely":[64],"that":[65,208],"this":[66,120,198],"cavity.":[71],"However,":[72],"there":[73],"dense":[75],"structures":[76],"where":[77],"might":[80],"still":[81],"belong":[82],"even":[86],"though":[87],"surrounded":[90],"large":[93],"degree":[94],"object.":[97],"This":[98],"is,":[99],"for":[100,104,217],"example,":[101],"case":[103],"coral":[105,141,189,204],"colonies.":[106],"Therefore,":[107],"additional":[108],"considered":[113],"distinguish":[115],"between":[116],"those":[117],"cases.":[118],"In":[119],"paper,":[121],"we":[122,153,200,206],"introduce":[123],"notion":[125],"curvature,":[128],"present":[129],"an":[130,239],"efficient":[131],"way":[132],"compute":[134],"it,":[135],"and":[136],"use":[137],"segment":[140],"polyp":[142],"integrating":[145],"into":[147],"occlusion":[150],"framework.":[151],"Moreover,":[152],"combine":[154],"curvature":[157,213,227],"with":[158],"other":[159,218],"Gaussian":[164],"mixture":[165],"model,":[166],"trained":[167],"few":[170],"user":[171],"scribbles,":[172],"resulting":[173],"significantly":[176],"improved":[177],"segmentation.":[179],"We":[180],"showcase":[181],"superiority":[183],"our":[185,221],"approach":[186,222],"using":[187],"four":[188],"colonies":[190],"different":[193],"morphological":[194],"types.":[195],"While":[196],"paper":[199],"restrict":[201],"ourselves":[202],"data,":[205],"believe":[207],"concept":[210],"also":[215],"useful":[216],"data.":[219],"Furthermore,":[220],"not":[224],"restricted":[225],"but":[228],"can":[229],"easily":[231],"extended":[232],"exploit":[234],"properties":[236],"given":[237],"on":[238],"object's":[240],"surface,":[241],"thereby":[242],"adjusting":[243],"specific":[246],"applications.":[247]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2025-11-06T06:51:31.235846","created_date":"2025-10-10T00:00:00"}
