{"id":"https://openalex.org/W1519330792","doi":"https://doi.org/10.2312/pe/eurovisshort/eurovisshort2012/067-071","title":"Fast Visualization of Gaussian Density Surfaces for Molecular Dynamics and Particle System Trajectories","display_name":"Fast Visualization of Gaussian Density Surfaces for Molecular Dynamics and Particle System Trajectories","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W1519330792","doi":"https://doi.org/10.2312/pe/eurovisshort/eurovisshort2012/067-071","mag":"1519330792"},"language":"en","primary_location":{"id":"doi:10.2312/pe/eurovisshort/eurovisshort2012/067-071","is_oa":true,"landing_page_url":"https://doi.org/10.2312/pe/eurovisshort/eurovisshort2012/067-071","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},"type":"article","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.2312/pe/eurovisshort/eurovisshort2012/067-071","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003476748","display_name":"Michael Krone","orcid":"https://orcid.org/0000-0002-1445-7568"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Krone, Michael","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048680880","display_name":"John E. Stone","orcid":"https://orcid.org/0000-0001-7215-762X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Stone, John","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038629539","display_name":"Thomas Ertl","orcid":"https://orcid.org/0000-0003-4019-2505"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ertl, Thomas","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5029996336","display_name":"Klaus Schulten","orcid":"https://orcid.org/0000-0001-7192-9632"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schulten, Klaus","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":7.7077,"has_fulltext":false,"cited_by_count":97,"citation_normalized_percentile":{"value":0.98072616,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13126","display_name":"Scientific Research and Discoveries","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13126","display_name":"Scientific Research and Discoveries","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13650","display_name":"Computational Physics and Python Applications","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5485301613807678},{"id":"https://openalex.org/keywords/statistical-physics","display_name":"Statistical physics","score":0.5334205031394958},{"id":"https://openalex.org/keywords/particle","display_name":"Particle (ecology)","score":0.5152321457862854},{"id":"https://openalex.org/keywords/dynamics","display_name":"Dynamics (music)","score":0.4915240705013275},{"id":"https://openalex.org/keywords/particle-system","display_name":"Particle system","score":0.46759623289108276},{"id":"https://openalex.org/keywords/particle-dynamics","display_name":"Particle dynamics","score":0.46500858664512634},{"id":"https://openalex.org/keywords/gaussian","display_name":"Gaussian","score":0.44199663400650024},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41010552644729614},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.35844409465789795},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.31730642914772034},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.3014208972454071},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24434399604797363},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.158002108335495},{"id":"https://openalex.org/keywords/acoustics","display_name":"Acoustics","score":0.07796522974967957}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5485301613807678},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.5334205031394958},{"id":"https://openalex.org/C2778517922","wikidata":"https://www.wikidata.org/wiki/Q7140482","display_name":"Particle (ecology)","level":2,"score":0.5152321457862854},{"id":"https://openalex.org/C145912823","wikidata":"https://www.wikidata.org/wiki/Q113558","display_name":"Dynamics (music)","level":2,"score":0.4915240705013275},{"id":"https://openalex.org/C179003449","wikidata":"https://www.wikidata.org/wiki/Q1757458","display_name":"Particle system","level":2,"score":0.46759623289108276},{"id":"https://openalex.org/C2985906894","wikidata":"https://www.wikidata.org/wiki/Q15994658","display_name":"Particle dynamics","level":3,"score":0.46500858664512634},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.44199663400650024},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41010552644729614},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.35844409465789795},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.31730642914772034},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.3014208972454071},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24434399604797363},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.158002108335495},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.07796522974967957},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.2312/pe/eurovisshort/eurovisshort2012/067-071","is_oa":true,"landing_page_url":"https://doi.org/10.2312/pe/eurovisshort/eurovisshort2012/067-071","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.2312/pe/eurovisshort/eurovisshort2012/067-071","is_oa":true,"landing_page_url":"https://doi.org/10.2312/pe/eurovisshort/eurovisshort2012/067-071","pdf_url":null,"source":{"id":"https://openalex.org/S7407052899","display_name":"Eurographics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W118889687","https://openalex.org/W1503953582","https://openalex.org/W1977115694","https://openalex.org/W2013173369","https://openalex.org/W2028753963","https://openalex.org/W2029667189","https://openalex.org/W2087179087","https://openalex.org/W2114678761","https://openalex.org/W2125404364","https://openalex.org/W2130249022","https://openalex.org/W2152167878","https://openalex.org/W2159497832","https://openalex.org/W2177731497","https://openalex.org/W2229412420","https://openalex.org/W2244686166"],"related_works":["https://openalex.org/W2029667189","https://openalex.org/W2169113748","https://openalex.org/W2028753963","https://openalex.org/W2229412420","https://openalex.org/W2177731497","https://openalex.org/W2154069299","https://openalex.org/W2053448121","https://openalex.org/W2244686166","https://openalex.org/W1977115694","https://openalex.org/W2150981663","https://openalex.org/W2063831812","https://openalex.org/W1993828173","https://openalex.org/W2130479394","https://openalex.org/W2006930542","https://openalex.org/W2132629607","https://openalex.org/W2120568174","https://openalex.org/W2056901100","https://openalex.org/W1968334774","https://openalex.org/W2071657576","https://openalex.org/W2054316010"],"abstract_inverted_index":{"We":[0],"present":[1],"an":[2,41],"efficient":[3],"algorithm":[4,27,39],"for":[5,28,60,87,96,109,116],"computation":[6],"of":[7,13,65,67,76,101],"surface":[8,43,106],"representations":[9,94],"enabling":[10],"interactive":[11,57,110],"visualization":[12],"large":[14],"dynamic":[15],"particle":[16],"data":[17],"sets.":[18],"Our":[19],"method":[20],"is":[21,107],"based":[22],"on":[23,79],"a":[24,30,80,114],"GPU-accelerated":[25,51],"data-parallel":[26],"computing":[29],"volumetric":[31],"density":[32,47],"map":[33],"from":[34,44,84],"Gaussian":[35],"weighted":[36],"particles.":[37],"The":[38,69,104],"extracts":[40],"isovalue":[42],"the":[45,74,98],"computed":[46],"map,":[48],"using":[49],"fast":[50],"Marching":[52],"Cubes.":[53],"This":[54],"approach":[55],"enables":[56],"frame":[58],"rates":[59],"molecular":[61,102],"dynamics":[62],"simulations":[63],"consisting":[64],"millions":[66],"atoms.":[68],"user":[70],"can":[71],"interactively":[72],"adjust":[73],"display":[75],"structural":[77],"detail":[78,86,92],"continuous":[81],"scale,":[82],"ranging":[83],"atomic":[85],"in-depth":[88],"analysis,":[89],"to":[90],"reduced":[91],"visual":[93],"suitable":[95],"viewing":[97],"overall":[99],"architecture":[100],"complexes.":[103],"extracted":[105],"useful":[108],"visualization,":[111],"and":[112],"provides":[113],"basis":[115],"structure":[117],"analysis":[118],"methods.":[119]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":14},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
