{"id":"https://openalex.org/W3157049006","doi":"https://doi.org/10.2298/csis200909030c","title":"A novel network aligner for the analysis of multiple protein-protein interaction networks","display_name":"A novel network aligner for the analysis of multiple protein-protein interaction networks","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3157049006","doi":"https://doi.org/10.2298/csis200909030c","mag":"3157049006"},"language":"en","primary_location":{"id":"doi:10.2298/csis200909030c","is_oa":true,"landing_page_url":"https://doi.org/10.2298/csis200909030c","pdf_url":"http://www.doiserbia.nb.rs/ft.aspx?id=1820-02142100030C","source":{"id":"https://openalex.org/S206939107","display_name":"Computer Science and Information Systems","issn_l":"1820-0214","issn":["1820-0214","2406-1018"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310321031","host_organization_name":"ComSIS Consortium","host_organization_lineage":["https://openalex.org/P4310321031"],"host_organization_lineage_names":["ComSIS Consortium"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computer Science and Information Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"http://www.doiserbia.nb.rs/ft.aspx?id=1820-02142100030C","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065653013","display_name":"Jing Chen","orcid":"https://orcid.org/0000-0003-1673-9734"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jing Chen","raw_affiliation_strings":["School of Artificial Intelligence and Computer Science, Jiangnan University Wuxi, China + Jiangsu Provincial Engineering Laboratory of Pattern Recognition and Computing Intelligence, Jiangnan University, Wuxi, China","School of Artificial Intelligence and Computer Science, Jiangnan University Wuxi, China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Computer Science, Jiangnan University Wuxi, China + Jiangsu Provincial Engineering Laboratory of Pattern Recognition and Computing Intelligence, Jiangnan University, Wuxi, China","institution_ids":["https://openalex.org/I111599522"]},{"raw_affiliation_string":"School of Artificial Intelligence and Computer Science, Jiangnan University Wuxi, China","institution_ids":["https://openalex.org/I111599522"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091235672","display_name":"Jia Huang","orcid":"https://orcid.org/0000-0002-0976-9882"},"institutions":[{"id":"https://openalex.org/I111599522","display_name":"Jiangnan University","ror":"https://ror.org/04mkzax54","country_code":"CN","type":"education","lineage":["https://openalex.org/I111599522"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jia Huang","raw_affiliation_strings":["School of Artificial Intelligence and Computer Science, Jiangnan University Wuxi, China"],"affiliations":[{"raw_affiliation_string":"School of Artificial Intelligence and Computer Science, Jiangnan University Wuxi, China","institution_ids":["https://openalex.org/I111599522"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5065653013"],"corresponding_institution_ids":["https://openalex.org/I111599522"],"apc_list":null,"apc_paid":null,"fwci":0.0804,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.4195371,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"18","issue":"4","first_page":"1427","last_page":"1444"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.9678000211715698,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8549044132232666},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.6553707122802734},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6462862491607666},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4691542387008667},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4405524730682373},{"id":"https://openalex.org/keywords/interaction-network","display_name":"Interaction network","score":0.43844541907310486},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.4307161867618561},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4087281823158264},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.4025542736053467},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.338134765625},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.12893813848495483},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10345661640167236},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.08233559131622314}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8549044132232666},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.6553707122802734},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6462862491607666},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4691542387008667},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4405524730682373},{"id":"https://openalex.org/C55105296","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interaction network","level":3,"score":0.43844541907310486},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.4307161867618561},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4087281823158264},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.4025542736053467},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.338134765625},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.12893813848495483},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10345661640167236},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.08233559131622314},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.2298/csis200909030c","is_oa":true,"landing_page_url":"https://doi.org/10.2298/csis200909030c","pdf_url":"http://www.doiserbia.nb.rs/ft.aspx?id=1820-02142100030C","source":{"id":"https://openalex.org/S206939107","display_name":"Computer Science and Information Systems","issn_l":"1820-0214","issn":["1820-0214","2406-1018"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310321031","host_organization_name":"ComSIS Consortium","host_organization_lineage":["https://openalex.org/P4310321031"],"host_organization_lineage_names":["ComSIS Consortium"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computer Science and Information Systems","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.2298/csis200909030c","is_oa":true,"landing_page_url":"https://doi.org/10.2298/csis200909030c","pdf_url":"http://www.doiserbia.nb.rs/ft.aspx?id=1820-02142100030C","source":{"id":"https://openalex.org/S206939107","display_name":"Computer Science and Information Systems","issn_l":"1820-0214","issn":["1820-0214","2406-1018"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310321031","host_organization_name":"ComSIS Consortium","host_organization_lineage":["https://openalex.org/P4310321031"],"host_organization_lineage_names":["ComSIS Consortium"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computer Science and Information Systems","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7200000286102295,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3157049006.pdf","grobid_xml":"https://content.openalex.org/works/W3157049006.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W1527318567","https://openalex.org/W1686696692","https://openalex.org/W1987027200","https://openalex.org/W2028313734","https://openalex.org/W2028793292","https://openalex.org/W2036265926","https://openalex.org/W2039616005","https://openalex.org/W2039872058","https://openalex.org/W2056124433","https://openalex.org/W2084668512","https://openalex.org/W2092986233","https://openalex.org/W2102562836","https://openalex.org/W2122863289","https://openalex.org/W2127957894","https://openalex.org/W2128408632","https://openalex.org/W2130237248","https://openalex.org/W2130687290","https://openalex.org/W2136845897","https://openalex.org/W2137648512","https://openalex.org/W2139361324","https://openalex.org/W2140084895","https://openalex.org/W2141185847","https://openalex.org/W2153929049","https://openalex.org/W2155834877","https://openalex.org/W2160313295","https://openalex.org/W2161443911","https://openalex.org/W2165253681","https://openalex.org/W2168474259","https://openalex.org/W2171081680","https://openalex.org/W2187406058","https://openalex.org/W2409564679","https://openalex.org/W2614977350","https://openalex.org/W2738984681","https://openalex.org/W2833630675","https://openalex.org/W2888281749","https://openalex.org/W2916767477","https://openalex.org/W2917431650","https://openalex.org/W2950397852","https://openalex.org/W2964024205","https://openalex.org/W3087930525","https://openalex.org/W3125065214","https://openalex.org/W4200351727","https://openalex.org/W4206353653","https://openalex.org/W4236236547","https://openalex.org/W6806866965"],"related_works":["https://openalex.org/W2086397253","https://openalex.org/W2133122801","https://openalex.org/W600422426","https://openalex.org/W2007156430","https://openalex.org/W2804364458","https://openalex.org/W2170882281","https://openalex.org/W3081478936","https://openalex.org/W4298130764","https://openalex.org/W2132641928","https://openalex.org/W2090259340"],"abstract_inverted_index":{"The":[0],"analysis":[1],"of":[2,10,79],"protein-protein":[3],"interaction":[4],"networks":[5,24],"can":[6,36],"transfer":[7],"the":[8,77,81,87,91,111,120],"knowledge":[9],"well-studied":[11],"biological":[12],"functions":[13,15],"to":[14,39,86,96,109],"that":[16,117],"are":[17],"not":[18],"yet":[19],"adequately":[20],"investigated":[21],"by":[22],"constructing":[23],"and":[25,62,72,127],"extracting":[26],"similar":[27,41],"network":[28,34,65,88],"structures":[29],"in":[30,123],"different":[31],"species.":[32],"Multiple":[33,54],"alignment":[35,66],"be":[37],"used":[38,95],"find":[40],"regions":[42],"among":[43],"multiple":[44,64],"networks.":[45],"In":[46,101],"this":[47],"paper,":[48],"we":[49],"introduce":[50],"Accurate":[51],"Combined":[52],"Clustering":[53],"Network":[55],"Alignment":[56],"(ACCMNA),":[57],"which":[58],"is":[59,83,94,107],"a":[60,104],"new":[61],"accurate":[63],"algorithm.":[67],"It":[68],"uses":[69],"both":[70],"topology":[71],"sequence":[73],"similarity":[74],"information.":[75],"First,":[76],"importance":[78],"all":[80],"nodes":[82],"calculated":[84],"according":[85],"structures.":[89],"Second,":[90],"seed-and-extend":[92],"framework":[93],"conduct":[97],"an":[98,132],"iterative":[99],"search.":[100],"each":[102],"iteration,":[103],"clustering":[105],"method":[106],"combined":[108],"generate":[110],"alignment.":[112],"Extensive":[113],"experimental":[114],"results":[115],"show":[116],"ACCMNA":[118],"outperformed":[119],"state-of-the-art":[121],"algorithms":[122],"producing":[124],"functionally":[125],"consistent":[126],"topological":[128],"conservation":[129],"alignments":[130],"within":[131],"acceptable":[133],"running":[134],"time.":[135]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
