{"id":"https://openalex.org/W6888628310","doi":"https://doi.org/10.21227/s9mj-vd81","title":"Single cells of Neurospora crassa show circadian oscillations, light entrainment, temperature compensation, and phase synchronization","display_name":"Single cells of Neurospora crassa show circadian oscillations, light entrainment, temperature compensation, and phase synchronization","publication_year":2019,"publication_date":"2019-02-04","ids":{"openalex":"https://openalex.org/W6888628310","doi":"https://doi.org/10.21227/s9mj-vd81"},"language":"en","primary_location":{"id":"doi:10.21227/s9mj-vd81","is_oa":true,"landing_page_url":"https://doi.org/10.21227/s9mj-vd81","pdf_url":null,"source":{"id":"https://openalex.org/S7407051695","display_name":"IEEE DataPort","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"dataset"},"type":"dataset","indexed_in":["datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.21227/s9mj-vd81","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Deng, Zhaojie","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Deng, Zhaojie","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Hwei-Cheong, Jia","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hwei-Cheong, Jia","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Caranica, Cristian","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Caranica, Cristian","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Wu, Lingyun","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wu, Lingyun","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Judge, Michael","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Judge, Michael","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Hull, Brooke","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hull, Brooke","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Rodriguez, Carmen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rodriguez, Carmen","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Griffith, James","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Griffith, James","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Al-Omari, Ahmad","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Al-Omari, Ahmad","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Arsenault, Sam","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Arsenault, Sam","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Schuttler, Heinz-Bernd","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Schuttler, Heinz-Bernd","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Mao, Leidong","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mao, Leidong","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":null,"display_name":"Arnold, Jonathan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Arnold, Jonathan","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":13,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":true,"primary_topic":null,"topics":[],"keywords":[{"id":"https://openalex.org/keywords/neurospora-crassa","display_name":"Neurospora crassa","score":0.8945000171661377},{"id":"https://openalex.org/keywords/circadian-clock","display_name":"Circadian clock","score":0.7095999717712402},{"id":"https://openalex.org/keywords/circadian-rhythm","display_name":"Circadian rhythm","score":0.5879999995231628},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.54830002784729},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.4214000105857849},{"id":"https://openalex.org/keywords/phase","display_name":"Phase (matter)","score":0.4185999929904938},{"id":"https://openalex.org/keywords/synchronization","display_name":"Synchronization (alternating current)","score":0.4065000116825104},{"id":"https://openalex.org/keywords/period","display_name":"Period (music)","score":0.3513000011444092}],"concepts":[{"id":"https://openalex.org/C2776739539","wikidata":"https://www.wikidata.org/wiki/Q133459","display_name":"Neurospora crassa","level":4,"score":0.8945000171661377},{"id":"https://openalex.org/C38606739","wikidata":"https://www.wikidata.org/wiki/Q5121352","display_name":"Circadian clock","level":3,"score":0.7095999717712402},{"id":"https://openalex.org/C121446783","wikidata":"https://www.wikidata.org/wiki/Q208353","display_name":"Circadian rhythm","level":2,"score":0.5879999995231628},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.5497000217437744},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.54830002784729},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4433000087738037},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.4413999915122986},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.4214000105857849},{"id":"https://openalex.org/C44280652","wikidata":"https://www.wikidata.org/wiki/Q104837","display_name":"Phase (matter)","level":2,"score":0.4185999929904938},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.41830000281333923},{"id":"https://openalex.org/C2778562939","wikidata":"https://www.wikidata.org/wiki/Q1298791","display_name":"Synchronization (alternating current)","level":3,"score":0.4065000116825104},{"id":"https://openalex.org/C2781291010","wikidata":"https://www.wikidata.org/wiki/Q178580","display_name":"Period (music)","level":2,"score":0.3513000011444092},{"id":"https://openalex.org/C84302363","wikidata":"https://www.wikidata.org/wiki/Q16154683","display_name":"Biological clock","level":3,"score":0.33660000562667847},{"id":"https://openalex.org/C2776769606","wikidata":"https://www.wikidata.org/wiki/Q309943","display_name":"Neurospora","level":5,"score":0.3343000113964081},{"id":"https://openalex.org/C54767332","wikidata":"https://www.wikidata.org/wiki/Q1751572","display_name":"Phase response","level":3,"score":0.29420000314712524},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.2851000130176544},{"id":"https://openalex.org/C16613235","wikidata":"https://www.wikidata.org/wiki/Q285982","display_name":"Endogeny","level":2,"score":0.2793000042438507},{"id":"https://openalex.org/C184738001","wikidata":"https://www.wikidata.org/wiki/Q14908739","display_name":"CLOCK","level":4,"score":0.2770000100135803},{"id":"https://openalex.org/C3017476499","wikidata":"https://www.wikidata.org/wiki/Q182925","display_name":"Fluorescent light","level":3,"score":0.2547000050544739},{"id":"https://openalex.org/C52909226","wikidata":"https://www.wikidata.org/wiki/Q5462835","display_name":"Fluorescent labelling","level":3,"score":0.25029999017715454}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.21227/s9mj-vd81","is_oa":true,"landing_page_url":"https://doi.org/10.21227/s9mj-vd81","pdf_url":null,"source":{"id":"https://openalex.org/S7407051695","display_name":"IEEE DataPort","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.21227/s9mj-vd81","is_oa":true,"landing_page_url":"https://doi.org/10.21227/s9mj-vd81","pdf_url":null,"source":{"id":"https://openalex.org/S7407051695","display_name":"IEEE DataPort","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"dataset"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Using":[0],"a":[1,6,14,53,81],"microfluidics":[2],"device,":[3],"fluorescence":[4,76],"of":[5,27,38,56,73,84,99,107,129,149,165],"recorder":[7],"(mCherry":[8],"or":[9,65,174],"mVenus)":[10],"gene":[11],"driven":[12],"by":[13,123,167],"clock-controlled":[15],"gene-2":[16],"promoter":[17],"(ccg-2p)":[18],"was":[19,116,187],"measured":[20,122],"simultaneously":[21],"on":[22,155],"over":[23,52,80],"1,000":[24],"single":[25,105,135],"cells":[26,45,106,112,136,161],"Neurospora":[28],"crassa":[29],"every":[30],"half":[31],"hour":[32,61],"for":[33],"10":[34],"days":[35],"under":[36],"each":[37],"varied":[39],"light":[40,51,178],"and":[41],"temperature":[42],"conditions.":[43],"Single":[44,160],"were":[46,162],"able":[47],"to":[48,50,89,138,171,194],"entrain":[49],"wide":[54],"range":[55,83],"day":[57],"lengths":[58],"including":[59],"6":[60,173],"(h),":[62],"12":[63,175],"h,":[64],"36":[66],"h":[67],"days.":[68],"In":[69],"addition,":[70],"the":[71,127,146,156,190],"period":[72],"oscillations":[74],"in":[75,103,134,142,189],"remained":[77],"remarkably":[78],"stable":[79],"physiological":[82],"temperatures":[85],"from":[86],"20":[87],"oC":[88,91],"30":[90],"(Q10":[92],"=":[93],"1.00-1.07).":[94],"These":[95],"results":[96],"provide":[97],"evidence":[98],"an":[100],"autonomous":[101],"clock":[102,157],"most":[104,111,153],"N.":[108],"crassa.":[109],"While":[110],"had":[113],"clocks,":[114],"there":[115],"substantial":[117],"variation":[118],"between":[119],"clocks":[120,133],"as":[121],"their":[124],"phase,":[125],"raising":[126],"question":[128],"how":[130],"such":[131],"cellular":[132],"phase-synchronize":[137],"achieve":[139],"circadian":[140],"behavior":[141],"eukaryotic":[143],"systems":[144],"at":[145],"macroscopic":[147],"level":[148],"107":[150],"cells,":[151],"where":[152],"measurements":[154],"are":[158],"performed.":[159],"placed":[163],"out":[164,181],"phase":[166,185],"allowing":[168],"one":[169],"population":[170,192],"receive":[172],"hours":[176],"more":[177],"before":[179],"lights":[180],"(D/D).":[182],"The":[183],"average":[184],"difference":[186],"reduced":[188],"mixed":[191],"relative":[193],"two":[195],"unmixed":[196],"control":[197],"populations.":[198]},"counts_by_year":[{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T06:51:31.235846","created_date":"2025-10-10T00:00:00"}
