{"id":"https://openalex.org/W4200032755","doi":"https://doi.org/10.21105/joss.03200","title":"morse: an R-package to analyse toxicity test data","display_name":"morse: an R-package to analyse toxicity test data","publication_year":2021,"publication_date":"2021-12-10","ids":{"openalex":"https://openalex.org/W4200032755","doi":"https://doi.org/10.21105/joss.03200"},"language":"en","primary_location":{"id":"doi:10.21105/joss.03200","is_oa":true,"landing_page_url":"https://doi.org/10.21105/joss.03200","pdf_url":"https://joss.theoj.org/papers/10.21105/joss.03200.pdf","source":{"id":"https://openalex.org/S4210214273","display_name":"The Journal of Open Source Software","issn_l":"2475-9066","issn":["2475-9066"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315853","host_organization_name":"Open Journals","host_organization_lineage":["https://openalex.org/P4310315853"],"host_organization_lineage_names":["Open Journals"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Open Source Software","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://joss.theoj.org/papers/10.21105/joss.03200.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056906475","display_name":"Virgile Baudrot","orcid":"https://orcid.org/0000-0003-1327-9728"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I178906410","display_name":"Lyon College","ror":"https://ror.org/03c4kec23","country_code":"US","type":"education","lineage":["https://openalex.org/I178906410"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR","US"],"is_corresponding":false,"raw_author_name":"Virgile Baudrot","raw_affiliation_strings":[", CNRS UMR5558, Laboratory de Biometry and Evolutionary Biology, 69100 Villeurbanne, France","University of Lyon, University Lyon"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":", CNRS UMR5558, Laboratory de Biometry and Evolutionary Biology, 69100 Villeurbanne, France","institution_ids":["https://openalex.org/I4210135640","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"University of Lyon, University Lyon","institution_ids":["https://openalex.org/I178906410","https://openalex.org/I100532134"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091737129","display_name":"Sandrine Charles","orcid":"https://orcid.org/0000-0003-4604-0166"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I178906410","display_name":"Lyon College","ror":"https://ror.org/03c4kec23","country_code":"US","type":"education","lineage":["https://openalex.org/I178906410"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR","US"],"is_corresponding":false,"raw_author_name":"Sandrine Charles","raw_affiliation_strings":[", CNRS UMR5558, Laboratory de Biometry and Evolutionary Biology, 69100 Villeurbanne, France","University of Lyon, University Lyon"],"raw_orcid":"https://orcid.org/0000-0003-4604-0166","affiliations":[{"raw_affiliation_string":", CNRS UMR5558, Laboratory de Biometry and Evolutionary Biology, 69100 Villeurbanne, France","institution_ids":["https://openalex.org/I4210135640","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"University of Lyon, University Lyon","institution_ids":["https://openalex.org/I178906410","https://openalex.org/I100532134"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.6369,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.86153327,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"6","issue":"68","first_page":"3200","last_page":"3200"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11235","display_name":"Statistical Methods in Clinical Trials","score":0.9909999966621399,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10136","display_name":"Statistical Methods and Inference","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11871","display_name":"Advanced Statistical Methods and Models","score":0.9635000228881836,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/morse-code","display_name":"Morse code","score":0.67429119348526},{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.5524079203605652},{"id":"https://openalex.org/keywords/toxicity","display_name":"Toxicity","score":0.48938101530075073},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.38388895988464355},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2510284185409546},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.16112548112869263},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.12764889001846313}],"concepts":[{"id":"https://openalex.org/C140031139","wikidata":"https://www.wikidata.org/wiki/Q79897","display_name":"Morse code","level":2,"score":0.67429119348526},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.5524079203605652},{"id":"https://openalex.org/C29730261","wikidata":"https://www.wikidata.org/wiki/Q274160","display_name":"Toxicity","level":2,"score":0.48938101530075073},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38388895988464355},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2510284185409546},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.16112548112869263},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.12764889001846313},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.21105/joss.03200","is_oa":true,"landing_page_url":"https://doi.org/10.21105/joss.03200","pdf_url":"https://joss.theoj.org/papers/10.21105/joss.03200.pdf","source":{"id":"https://openalex.org/S4210214273","display_name":"The Journal of Open Source Software","issn_l":"2475-9066","issn":["2475-9066"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315853","host_organization_name":"Open Journals","host_organization_lineage":["https://openalex.org/P4310315853"],"host_organization_lineage_names":["Open Journals"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Open Source Software","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.21105/joss.03200","is_oa":true,"landing_page_url":"https://doi.org/10.21105/joss.03200","pdf_url":"https://joss.theoj.org/papers/10.21105/joss.03200.pdf","source":{"id":"https://openalex.org/S4210214273","display_name":"The Journal of Open Source Software","issn_l":"2475-9066","issn":["2475-9066"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310315853","host_organization_name":"Open Journals","host_organization_lineage":["https://openalex.org/P4310315853"],"host_organization_lineage_names":["Open Journals"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Open Source Software","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.4699999988079071,"display_name":"Zero hunger"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320327122","display_name":"Office National de l\u2019Eau et des Milieux Aquatiques","ror":"https://ror.org/01pf7nz88"},{"id":"https://openalex.org/F4320328415","display_name":"Agence fran\u00e7aise pour la biodiversit\u00e9","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4200032755.pdf","grobid_xml":"https://content.openalex.org/works/W4200032755.grobid-xml"},"referenced_works_count":11,"referenced_works":["https://openalex.org/W1987136446","https://openalex.org/W2013607464","https://openalex.org/W2060274300","https://openalex.org/W2749285214","https://openalex.org/W2781645123","https://openalex.org/W2803988097","https://openalex.org/W2888185901","https://openalex.org/W2965680889","https://openalex.org/W4243972163","https://openalex.org/W4246734657","https://openalex.org/W4252569230"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W4224264613","https://openalex.org/W4252272066","https://openalex.org/W652105763","https://openalex.org/W4251604918","https://openalex.org/W2091040659","https://openalex.org/W2808402399","https://openalex.org/W4298428686","https://openalex.org/W4237045390","https://openalex.org/W3112748197"],"abstract_inverted_index":{"The":[0],"morse":[1,90],"package":[2,91],"is":[3],"used":[4,33],"for":[5,68,75,100,116],"the":[6,89,93,128],"analysis":[7],"of":[8,36,66,71],"experimental":[9],"data":[10],"collected":[11],"from":[12],"standard":[13],"toxicity":[14,28,49,78],"tests.":[15],"It":[16],"provides":[17],"ready-to-use":[18],"functions":[19],"to":[20,25,30,124,133],"visualize":[21],"a":[22,135],"dataset":[23],"and":[24,96,118],"estimate":[26],"several":[27],"indices":[29,50],"be":[31],"further":[32],"in":[34,40,107,127,131],"support":[35],"environmental":[37,138],"risk":[38,139],"assessment":[39],"full":[41],"compliance":[42],"with":[43],"regulatory":[44,57,69],"requirements":[45],"(OECD,":[46,81],"2006).":[47],"Such":[48],"are":[51,113],"indeed":[52],"typically":[53],"requested":[54],"by":[55],"standardized":[56],"guidelines":[58],"on":[59],"which":[60],"national":[61],"agencies":[62],"base":[63],"their":[64],"evaluation":[65],"applications":[67],"approval":[70],"chemical":[72],"substances;":[73],"see":[74],"example":[76],"OECD":[77],"testing":[79],"guideline":[80],"2012(OECD,":[82],",":[83],"2016)).":[84],"Tools":[85],"gathered":[86],"together":[87],"within":[88],"involve":[92],"most":[94],"advanced":[95],"innovative":[97],"methods":[98],"developed":[99],"ecotoxicology,":[101],"such":[102],"as":[103],"appropriate":[104],"stochastic":[105],"parts":[106],"dose-response":[108],"modelling":[109],"Hence,":[110],"these":[111],"tools":[112],"easily":[114],"accessible":[115],"ecotoxicologists":[117],"regulators":[119],"who":[120],"do":[121],"not":[122],"need":[123],"deeply":[125],"invest":[126],"underlying":[129],"technicalities":[130],"order":[132],"perform":[134],"valuable":[136],"quantitative":[137],"assessment.":[140]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
