{"id":"https://openalex.org/W2965875476","doi":"https://doi.org/10.18653/v1/w19-5021","title":"Annotating Temporal Information in Clinical Notes for Timeline Reconstruction: Towards the Definition of Calendar Expressions","display_name":"Annotating Temporal Information in Clinical Notes for Timeline Reconstruction: Towards the Definition of Calendar Expressions","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2965875476","doi":"https://doi.org/10.18653/v1/w19-5021","mag":"2965875476"},"language":"en","primary_location":{"id":"doi:10.18653/v1/w19-5021","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w19-5021","pdf_url":"https://www.aclweb.org/anthology/W19-5021.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 18th BioNLP Workshop and Shared Task","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.aclweb.org/anthology/W19-5021.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073031146","display_name":"Natalia Viani","orcid":"https://orcid.org/0000-0003-2205-2322"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I4210144746","display_name":"The London College","ror":"https://ror.org/0546ajs61","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210144746"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["GB","SE"],"is_corresponding":true,"raw_author_name":"Natalia Viani","raw_affiliation_strings":["IoPPN, King's College London London, UK","University College London London, UK","College London London, UK","EECS, KTH, Stockholm, Sweden"],"affiliations":[{"raw_affiliation_string":"IoPPN, King's College London London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"University College London London, UK","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"College London London, UK","institution_ids":["https://openalex.org/I4210144746"]},{"raw_affiliation_string":"EECS, KTH, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084283545","display_name":"Hegler Tissot","orcid":"https://orcid.org/0000-0003-4635-451X"},"institutions":[{"id":"https://openalex.org/I4210144746","display_name":"The London College","ror":"https://ror.org/0546ajs61","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210144746"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["GB","SE"],"is_corresponding":false,"raw_author_name":"Hegler Tissot","raw_affiliation_strings":["IoPPN, King's College London London, UK","College London London, UK","EECS, KTH, Stockholm, Sweden","University College London London, UK"],"affiliations":[{"raw_affiliation_string":"IoPPN, King's College London London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"College London London, UK","institution_ids":["https://openalex.org/I4210144746"]},{"raw_affiliation_string":"EECS, KTH, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]},{"raw_affiliation_string":"University College London London, UK","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075479162","display_name":"Ariane Bernardino","orcid":null},"institutions":[{"id":"https://openalex.org/I4210144746","display_name":"The London College","ror":"https://ror.org/0546ajs61","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210144746"]},{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["GB","SE"],"is_corresponding":false,"raw_author_name":"Ariane Bernardino","raw_affiliation_strings":["EECS, KTH, Stockholm, Sweden","College London London, UK","IoPPN, King's College London London, UK","University College London London, UK"],"affiliations":[{"raw_affiliation_string":"EECS, KTH, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]},{"raw_affiliation_string":"College London London, UK","institution_ids":["https://openalex.org/I4210144746"]},{"raw_affiliation_string":"IoPPN, King's College London London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"University College London London, UK","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070579609","display_name":"Sumithra Velupillai","orcid":"https://orcid.org/0000-0002-4178-2980"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I4210144746","display_name":"The London College","ror":"https://ror.org/0546ajs61","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210144746"]},{"id":"https://openalex.org/I183935753","display_name":"King's College London","ror":"https://ror.org/0220mzb33","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I183935753"]},{"id":"https://openalex.org/I86987016","display_name":"KTH Royal Institute of Technology","ror":"https://ror.org/026vcq606","country_code":"SE","type":"education","lineage":["https://openalex.org/I86987016"]}],"countries":["GB","SE"],"is_corresponding":false,"raw_author_name":"Sumithra Velupillai","raw_affiliation_strings":["College London London, UK","EECS, KTH, Stockholm, Sweden","IoPPN, King's College London London, UK","University College London London, UK"],"affiliations":[{"raw_affiliation_string":"College London London, UK","institution_ids":["https://openalex.org/I4210144746"]},{"raw_affiliation_string":"EECS, KTH, Stockholm, Sweden","institution_ids":["https://openalex.org/I86987016"]},{"raw_affiliation_string":"IoPPN, King's College London London, UK","institution_ids":["https://openalex.org/I183935753"]},{"raw_affiliation_string":"University College London London, UK","institution_ids":["https://openalex.org/I45129253"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5073031146"],"corresponding_institution_ids":["https://openalex.org/I183935753","https://openalex.org/I4210144746","https://openalex.org/I45129253","https://openalex.org/I86987016"],"apc_list":null,"apc_paid":null,"fwci":0.1445,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.57660447,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"201","last_page":"210"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/timeline","display_name":"Timeline","score":0.9879035949707031},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.806348443031311},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7935429811477661},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7481422424316406},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5546784996986389},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4677353799343109},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.4323241114616394},{"id":"https://openalex.org/keywords/temporal-annotation","display_name":"Temporal annotation","score":0.4109513461589813},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3965194821357727},{"id":"https://openalex.org/keywords/natural-language","display_name":"Natural language","score":0.11433258652687073}],"concepts":[{"id":"https://openalex.org/C4438859","wikidata":"https://www.wikidata.org/wiki/Q186117","display_name":"Timeline","level":2,"score":0.9879035949707031},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.806348443031311},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7935429811477661},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7481422424316406},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5546784996986389},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4677353799343109},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.4323241114616394},{"id":"https://openalex.org/C7044111","wikidata":"https://www.wikidata.org/wiki/Q15844891","display_name":"Temporal annotation","level":5,"score":0.4109513461589813},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3965194821357727},{"id":"https://openalex.org/C195324797","wikidata":"https://www.wikidata.org/wiki/Q33742","display_name":"Natural language","level":2,"score":0.11433258652687073},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C129353971","wikidata":"https://www.wikidata.org/wiki/Q5156949","display_name":"Comprehension approach","level":3,"score":0.0},{"id":"https://openalex.org/C14919245","wikidata":"https://www.wikidata.org/wiki/Q1976109","display_name":"Language technology","level":4,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.18653/v1/w19-5021","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w19-5021","pdf_url":"https://www.aclweb.org/anthology/W19-5021.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 18th BioNLP Workshop and Shared Task","raw_type":"proceedings-article"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10095200","is_oa":false,"landing_page_url":"https://discovery.ucl.ac.uk/id/eprint/10095200/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"     In:  Proceedings of the 18th BioNLP Workshop and Shared Task.  (pp. pp. 201-210).  Association for Computational Linguistics (ACL): Florence, Italy. (2019)     ","raw_type":"Proceedings paper"}],"best_oa_location":{"id":"doi:10.18653/v1/w19-5021","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w19-5021","pdf_url":"https://www.aclweb.org/anthology/W19-5021.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the 18th BioNLP Workshop and Shared Task","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1525809646","display_name":null,"funder_award_id":"600398","funder_id":"https://openalex.org/F4320323807","funder_display_name":"Institut National Du Cancer"},{"id":"https://openalex.org/G1783795302","display_name":null,"funder_award_id":"Project","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G291618300","display_name":null,"funder_award_id":"2015-0035","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G3456956060","display_name":null,"funder_award_id":"INCA 600398","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"},{"id":"https://openalex.org/G511139680","display_name":null,"funder_award_id":"2015-00359","funder_id":"https://openalex.org/F4320322581","funder_display_name":"Vetenskapsr\u00e5det"}],"funders":[{"id":"https://openalex.org/F4320322581","display_name":"Vetenskapsr\u00e5det","ror":"https://ror.org/03zttf063"},{"id":"https://openalex.org/F4320323807","display_name":"Institut National Du Cancer","ror":"https://ror.org/03m8vkq32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2965875476.pdf","grobid_xml":"https://content.openalex.org/works/W2965875476.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W30314283","https://openalex.org/W795008685","https://openalex.org/W1700470553","https://openalex.org/W1966578683","https://openalex.org/W1990886313","https://openalex.org/W2005430761","https://openalex.org/W2115678331","https://openalex.org/W2137407193","https://openalex.org/W2138563571","https://openalex.org/W2147489532","https://openalex.org/W2185599447","https://openalex.org/W2293452551","https://openalex.org/W2310997048","https://openalex.org/W2468432491","https://openalex.org/W2509285521","https://openalex.org/W2568636364","https://openalex.org/W2788695823","https://openalex.org/W2898749396","https://openalex.org/W2899274402","https://openalex.org/W2917019145"],"related_works":["https://openalex.org/W2080575979","https://openalex.org/W4385569300","https://openalex.org/W48671780","https://openalex.org/W1994489417","https://openalex.org/W2369337446","https://openalex.org/W2573587940","https://openalex.org/W2061851981","https://openalex.org/W3145920652","https://openalex.org/W2137228101","https://openalex.org/W166137614"],"abstract_inverted_index":{"To":[0],"automatically":[1],"analyse":[2],"complex":[3],"trajectory":[4],"information":[5,76],"enclosed":[6],"in":[7,33,79],"clinical":[8,37,80],"text":[9,81],"(e.g.":[10],"timing":[11],"of":[12,15,86,113],"symptoms,":[13],"duration":[14],"treatment),":[16],"it":[17],"is":[18,77,99],"important":[19],"to":[20,101],"understand":[21],"the":[22,36,54,102,111,114],"related":[23],"temporal":[24,75],"aspects,":[25],"anchoring":[26],"each":[27],"event":[28],"on":[29,53,94],"an":[30],"absolute":[31],"point":[32],"time.":[34],"In":[35,69],"domain,":[38],"few":[39],"temporally":[40],"annotated":[41],"corpora":[42],"are":[43],"currently":[44],"available.":[45],"Moreover,":[46],"underlying":[47],"annotation":[48,134],"schemas":[49],"-which":[50],"mainly":[51],"rely":[52],"TimeML":[55,115],"standard":[56],"-are":[57],"not":[58],"necessarily":[59],"easily":[60],"applicable":[61],"for":[62,118,140],"applications":[63],"such":[64],"as":[65],"patient":[66],"timeline":[67,120,141],"reconstruction.":[68],"this":[70],"work,":[71],"we":[72,109,130],"investigated":[73],"how":[74],"documented":[78],"by":[82],"annotating":[83],"a":[84,128,132],"corpus":[85,98],"medical":[87],"reports":[88],"with":[89],"time":[90],"expressions":[91],"(TIMEXes),":[92],"based":[93],"TimeML.":[95],"The":[96],"developed":[97],"available":[100],"NLP":[103],"community.":[104],"Starting":[105],"from":[106],"our":[107],"annotations,":[108],"analysed":[110],"suitability":[112],"TIMEX":[116],"schema":[117,135],"capturing":[119],"information,":[121],"identifying":[122],"challenges":[123],"and":[124],"possible":[125],"solutions.":[126],"As":[127],"result,":[129],"propose":[131],"novel":[133],"that":[136],"could":[137],"be":[138],"useful":[139],"reconstruction:":[142],"CALendar":[143],"EXpression":[144],"(CALEX).":[145]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
