{"id":"https://openalex.org/W2899206203","doi":"https://doi.org/10.18653/v1/w18-5622","title":"Evaluation of a Sequence Tagging Tool for Biomedical Texts","display_name":"Evaluation of a Sequence Tagging Tool for Biomedical Texts","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W2899206203","doi":"https://doi.org/10.18653/v1/w18-5622","mag":"2899206203"},"language":"en","primary_location":{"id":"doi:10.18653/v1/w18-5622","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w18-5622","pdf_url":"https://www.aclweb.org/anthology/W18-5622.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.aclweb.org/anthology/W18-5622.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024948446","display_name":"Julien Tourille","orcid":"https://orcid.org/0000-0003-4486-4364"},"institutions":[{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Julien Tourille","raw_affiliation_strings":["LIMSI, CNRS, Universit Paris-Saclay,","Univ. Paris-Sud","LIMSI, CNRS, Universit\u00e9 Paris-Saclay,"],"affiliations":[{"raw_affiliation_string":"LIMSI, CNRS, Universit Paris-Saclay,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Univ. Paris-Sud","institution_ids":["https://openalex.org/I102197404"]},{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris-Saclay,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045484943","display_name":"Matthieu Doutreligne","orcid":"https://orcid.org/0000-0001-8072-9966"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210109317","display_name":"Wind Power Engineering (Japan)","ror":"https://ror.org/020wewy68","country_code":"JP","type":"company","lineage":["https://openalex.org/I4210109317"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR","JP"],"is_corresponding":false,"raw_author_name":"Matthieu Doutreligne","raw_affiliation_strings":["LIMSI, CNRS, Universit Paris-Saclay,","WIND-DSI, AP-HP,","LIMSI, CNRS, Universit\u00e9 Paris-Saclay,"],"affiliations":[{"raw_affiliation_string":"LIMSI, CNRS, Universit Paris-Saclay,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"WIND-DSI, AP-HP,","institution_ids":["https://openalex.org/I4210109317"]},{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris-Saclay,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088565202","display_name":"Olivier Ferret","orcid":"https://orcid.org/0000-0003-0755-2361"},"institutions":[{"id":"https://openalex.org/I4210085861","display_name":"Laboratoire d'Int\u00e9gration des Syst\u00e8mes et des Technologies","ror":"https://ror.org/000dbcc61","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210085861","https://openalex.org/I4210117989"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Olivier Ferret","raw_affiliation_strings":["CEA, LIST,"],"affiliations":[{"raw_affiliation_string":"CEA, LIST,","institution_ids":["https://openalex.org/I4210085861"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108234466","display_name":"Aur\u00e9lie N\u00e9v\u00e9ol","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Aur\u00e9lie N\u00e9v\u00e9ol","raw_affiliation_strings":["LIMSI, CNRS, Universit\u00e9 Paris-Saclay,"],"affiliations":[{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris-Saclay,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041159431","display_name":"Nicol\u00e1s Paris","orcid":"https://orcid.org/0000-0002-1533-5087"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I277688954","display_name":"Universit\u00e9 Paris-Saclay","ror":"https://ror.org/03xjwb503","country_code":"FR","type":"education","lineage":["https://openalex.org/I277688954"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210109317","display_name":"Wind Power Engineering (Japan)","ror":"https://ror.org/020wewy68","country_code":"JP","type":"company","lineage":["https://openalex.org/I4210109317"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR","JP"],"is_corresponding":false,"raw_author_name":"Nicolas Paris","raw_affiliation_strings":["Sorbonne Universit\u00e9,","LIMSI, CNRS, Universit\u00e9 Paris-Saclay,","WIND-DSI, AP-HP,"],"affiliations":[{"raw_affiliation_string":"Sorbonne Universit\u00e9,","institution_ids":["https://openalex.org/I39804081"]},{"raw_affiliation_string":"LIMSI, CNRS, Universit\u00e9 Paris-Saclay,","institution_ids":["https://openalex.org/I277688954","https://openalex.org/I4210115485","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"WIND-DSI, AP-HP,","institution_ids":["https://openalex.org/I4210109317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056834851","display_name":"Xavier Tannier","orcid":"https://orcid.org/0000-0002-2452-8868"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210141120","display_name":"Sorbonne University Abu Dhabi","ror":"https://ror.org/03e1ymy32","country_code":"AE","type":"education","lineage":["https://openalex.org/I4210141120"]},{"id":"https://openalex.org/I4389425324","display_name":"Laboratoire d'Informatique M\u00e9dicale et d'Ing\u00e9nierie des Connaissances en e-Sant\u00e9","ror":"https://ror.org/01jr1v359","country_code":null,"type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210091279","https://openalex.org/I4389425324"]},{"id":"https://openalex.org/I51101395","display_name":"Universit\u00e9 Paris 1 Panth\u00e9on-Sorbonne","ror":"https://ror.org/002t25c44","country_code":"FR","type":"education","lineage":["https://openalex.org/I51101395"]}],"countries":["AE","FR"],"is_corresponding":false,"raw_author_name":"Xavier Tannier","raw_affiliation_strings":["Inserm, LIMICS,","Sorbonne Universit,","Sorbonne Universit\u00e9,"],"affiliations":[{"raw_affiliation_string":"Inserm, LIMICS,","institution_ids":["https://openalex.org/I4389425324","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Sorbonne Universit,","institution_ids":["https://openalex.org/I4210141120","https://openalex.org/I39804081","https://openalex.org/I51101395"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9,","institution_ids":["https://openalex.org/I39804081"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5024948446"],"corresponding_institution_ids":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I277688954","https://openalex.org/I4210115485"],"apc_list":null,"apc_paid":null,"fwci":1.5232,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.87388944,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"193","last_page":"203"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.732054591178894},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.624214768409729},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5651794672012329},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4788679778575897},{"id":"https://openalex.org/keywords/part-of-speech-tagging","display_name":"Part-of-speech tagging","score":0.4246901869773865},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40221211314201355},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1336512267589569},{"id":"https://openalex.org/keywords/part-of-speech","display_name":"Part of speech","score":0.12950125336647034}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.732054591178894},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.624214768409729},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5651794672012329},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4788679778575897},{"id":"https://openalex.org/C2780684714","wikidata":"https://www.wikidata.org/wiki/Q1271424","display_name":"Part-of-speech tagging","level":3,"score":0.4246901869773865},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40221211314201355},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1336512267589569},{"id":"https://openalex.org/C123406163","wikidata":"https://www.wikidata.org/wiki/Q82042","display_name":"Part of speech","level":2,"score":0.12950125336647034},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.18653/v1/w18-5622","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w18-5622","pdf_url":"https://www.aclweb.org/anthology/W18-5622.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis","raw_type":"proceedings-article"},{"id":"pmh:oai:HAL:hal-01990502v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01990502","pdf_url":null,"source":{"id":"https://openalex.org/S4406922461","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"International Workshop on Health Text Mining and Information Analysis, Oct 2018, Bruxelles, Belgium","raw_type":"Conference papers"}],"best_oa_location":{"id":"doi:10.18653/v1/w18-5622","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w18-5622","pdf_url":"https://www.aclweb.org/anthology/W18-5622.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3038135699","display_name":null,"funder_award_id":"009-01","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G4603380532","display_name":"Automatic Understanding of Biomedical Texts for Translational Research","funder_award_id":"ANR-13-JS02-0009","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320338463","display_name":"CHIST-ERA","ror":"https://ror.org/00rbzpz17"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2899206203.pdf","grobid_xml":"https://content.openalex.org/works/W2899206203.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W8550301","https://openalex.org/W168564468","https://openalex.org/W1522301498","https://openalex.org/W1614298861","https://openalex.org/W2045718189","https://openalex.org/W2064675550","https://openalex.org/W2106411961","https://openalex.org/W2113207845","https://openalex.org/W2127241285","https://openalex.org/W2144578941","https://openalex.org/W2150102617","https://openalex.org/W2153579005","https://openalex.org/W2158899491","https://openalex.org/W2178441628","https://openalex.org/W2250539671","https://openalex.org/W2251220668","https://openalex.org/W2293452551","https://openalex.org/W2296283641","https://openalex.org/W2384495648","https://openalex.org/W2468432491","https://openalex.org/W2478432301","https://openalex.org/W2493916176","https://openalex.org/W2552553554","https://openalex.org/W2588331448","https://openalex.org/W2800535933","https://openalex.org/W2803609931","https://openalex.org/W2804221886","https://openalex.org/W2899771611","https://openalex.org/W2917019145","https://openalex.org/W2952087486","https://openalex.org/W2952230511","https://openalex.org/W2962739339","https://openalex.org/W2962843773","https://openalex.org/W2962902328","https://openalex.org/W2963186636","https://openalex.org/W2963706742","https://openalex.org/W2963940534","https://openalex.org/W2963956191","https://openalex.org/W2964121744","https://openalex.org/W4294170691","https://openalex.org/W4297748452"],"related_works":["https://openalex.org/W2246244723","https://openalex.org/W2385406649","https://openalex.org/W2769089917","https://openalex.org/W2112284452","https://openalex.org/W2396342956","https://openalex.org/W3188962172","https://openalex.org/W2772917594","https://openalex.org/W3204019825","https://openalex.org/W2048048323","https://openalex.org/W2377704837"],"abstract_inverted_index":{"Julien":[0],"Tourille,":[1],"Matthieu":[2],"Doutreligne,":[3],"Olivier":[4],"Ferret,":[5],"Aur\u00e9lie":[6],"N\u00e9v\u00e9ol,":[7],"Nicolas":[8],"Paris,":[9],"Xavier":[10],"Tannier.":[11],"Proceedings":[12],"of":[13],"the":[14],"Ninth":[15],"International":[16],"Workshop":[17],"on":[18],"Health":[19],"Text":[20],"Mining":[21],"and":[22],"Information":[23],"Analysis.":[24],"2018.":[25]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":4}],"updated_date":"2026-04-16T15:07:20.185449","created_date":"2025-10-10T00:00:00"}
