{"id":"https://openalex.org/W2739952768","doi":"https://doi.org/10.18653/v1/w17-2315","title":"Biomedical Event Extraction using Abstract Meaning Representation","display_name":"Biomedical Event Extraction using Abstract Meaning Representation","publication_year":2017,"publication_date":"2017-01-01","ids":{"openalex":"https://openalex.org/W2739952768","doi":"https://doi.org/10.18653/v1/w17-2315","mag":"2739952768"},"language":"en","primary_location":{"id":"doi:10.18653/v1/w17-2315","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w17-2315","pdf_url":"https://www.aclweb.org/anthology/W17-2315.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioNLP 2017","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.aclweb.org/anthology/W17-2315.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001484153","display_name":"Sudha Rao","orcid":null},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sudha Rao","raw_affiliation_strings":["Computer Science, University of Maryland, College Park,"],"affiliations":[{"raw_affiliation_string":"Computer Science, University of Maryland, College Park,","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005020376","display_name":"Daniel Marcu","orcid":null},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel Marcu","raw_affiliation_strings":["Information Sciences Institute, University of Southern California"],"affiliations":[{"raw_affiliation_string":"Information Sciences Institute, University of Southern California","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106821597","display_name":"Kevin Knight","orcid":"https://orcid.org/0000-0001-9117-1718"},"institutions":[{"id":"https://openalex.org/I1174212","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60","country_code":"US","type":"education","lineage":["https://openalex.org/I1174212"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin Knight","raw_affiliation_strings":["Information Sciences Institute, University of Southern California"],"affiliations":[{"raw_affiliation_string":"Information Sciences Institute, University of Southern California","institution_ids":["https://openalex.org/I1174212"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019928111","display_name":"Hal Daum\u00e9","orcid":"https://orcid.org/0000-0002-3760-345X"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hal Daum\u00e9 III","raw_affiliation_strings":["Computer Science, University of Maryland, College Park,"],"affiliations":[{"raw_affiliation_string":"Computer Science, University of Maryland, College Park,","institution_ids":["https://openalex.org/I66946132"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5001484153"],"corresponding_institution_ids":["https://openalex.org/I66946132"],"apc_list":null,"apc_paid":null,"fwci":4.147,"has_fulltext":true,"cited_by_count":79,"citation_normalized_percentile":{"value":0.95140104,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":null,"issue":null,"first_page":"126","last_page":"135"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7802884578704834},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.6533792018890381},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6362409591674805},{"id":"https://openalex.org/keywords/meaning","display_name":"Meaning (existential)","score":0.6234825253486633},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5155305862426758},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4998805522918701},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.47076845169067383},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.44316500425338745},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.26199641823768616},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.07545000314712524}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7802884578704834},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.6533792018890381},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6362409591674805},{"id":"https://openalex.org/C2780876879","wikidata":"https://www.wikidata.org/wiki/Q3054749","display_name":"Meaning (existential)","level":2,"score":0.6234825253486633},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5155305862426758},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4998805522918701},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.47076845169067383},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.44316500425338745},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.26199641823768616},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.07545000314712524},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.18653/v1/w17-2315","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w17-2315","pdf_url":"https://www.aclweb.org/anthology/W17-2315.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioNLP 2017","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.18653/v1/w17-2315","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w17-2315","pdf_url":"https://www.aclweb.org/anthology/W17-2315.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioNLP 2017","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2739952768.pdf","grobid_xml":"https://content.openalex.org/works/W2739952768.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W136394213","https://openalex.org/W154351976","https://openalex.org/W850463266","https://openalex.org/W1165382972","https://openalex.org/W1522301498","https://openalex.org/W1969709265","https://openalex.org/W1975481163","https://openalex.org/W2023352384","https://openalex.org/W2028861968","https://openalex.org/W2032566933","https://openalex.org/W2050879574","https://openalex.org/W2064675550","https://openalex.org/W2103305545","https://openalex.org/W2107598941","https://openalex.org/W2108706252","https://openalex.org/W2110408238","https://openalex.org/W2117130368","https://openalex.org/W2129769245","https://openalex.org/W2131774270","https://openalex.org/W2149713870","https://openalex.org/W2149837184","https://openalex.org/W2153579005","https://openalex.org/W2166111585","https://openalex.org/W2166474856","https://openalex.org/W2195986012","https://openalex.org/W2250469303","https://openalex.org/W2250591852","https://openalex.org/W2251108261","https://openalex.org/W2251279337","https://openalex.org/W2251814321","https://openalex.org/W2251988705","https://openalex.org/W2252123671","https://openalex.org/W2293174806","https://openalex.org/W2296308987","https://openalex.org/W2475275044","https://openalex.org/W2518443799","https://openalex.org/W2964121744","https://openalex.org/W3009731111","https://openalex.org/W4252806974","https://openalex.org/W4294170691"],"related_works":["https://openalex.org/W2088836968","https://openalex.org/W2369480852","https://openalex.org/W2140798747","https://openalex.org/W2017063170","https://openalex.org/W2948169060","https://openalex.org/W2062195135","https://openalex.org/W2360473631","https://openalex.org/W2730112582","https://openalex.org/W2897855253","https://openalex.org/W3179723530"],"abstract_inverted_index":{"We":[0,64],"propose":[1],"a":[2,32,39,54],"novel,":[3],"Abstract":[4],"Meaning":[5],"Representation":[6],"(AMR)":[7],"based":[8,57],"approach":[9,58,67],"to":[10,59],"identifying":[11],"molecular":[12],"events/interactions":[13],"in":[14],"biomedical":[15],"text.":[16],"Our":[17],"key":[18],"contributions":[19],"are:":[20],"(1)":[21],"an":[22,29,46,50],"empirical":[23],"validation":[24],"of":[25,34],"our":[26,66],"hypothesis":[27],"that":[28,43],"event":[30,47],"is":[31],"subgraph":[33,48],"the":[35,69],"AMR":[36],"graph,":[37],"(2)":[38],"neural":[40],"network-based":[41],"model":[42],"identifies":[44],"such":[45],"given":[49],"AMR,":[51],"and":[52,80],"(3)":[53],"distant":[55],"supervision":[56],"gather":[60],"additional":[61],"training":[62],"data.":[63],"evaluate":[65],"on":[68],"2013":[70],"Genia":[71],"Event":[72],"Extraction":[73],"dataset":[74],"1":[75],"(Kim":[76],"et":[77],"al.,":[78],"2013)":[79],"show":[81],"promising":[82],"results.":[83]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":13},{"year":2019,"cited_by_count":17},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
