{"id":"https://openalex.org/W2251924674","doi":"https://doi.org/10.18653/v1/w15-3814","title":"Using word embedding for bio-event extraction","display_name":"Using word embedding for bio-event extraction","publication_year":2015,"publication_date":"2015-01-01","ids":{"openalex":"https://openalex.org/W2251924674","doi":"https://doi.org/10.18653/v1/w15-3814","mag":"2251924674"},"language":"en","primary_location":{"id":"doi:10.18653/v1/w15-3814","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w15-3814","pdf_url":"https://www.aclweb.org/anthology/W15-3814.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of BioNLP 15","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.aclweb.org/anthology/W15-3814.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100369793","display_name":"Chen Li","orcid":"https://orcid.org/0000-0002-0079-3106"},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chen Li","raw_affiliation_strings":["Massachusetts Institute of Technology, United States"],"affiliations":[{"raw_affiliation_string":"Massachusetts Institute of Technology, United States","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021719522","display_name":"Runqing Song","orcid":null},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Runqing Song","raw_affiliation_strings":["Xidian University, China"],"affiliations":[{"raw_affiliation_string":"Xidian University, China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007426895","display_name":"Maria Liakata","orcid":"https://orcid.org/0000-0001-5765-0416"},"institutions":[{"id":"https://openalex.org/I39555362","display_name":"University of Warwick","ror":"https://ror.org/01a77tt86","country_code":"GB","type":"education","lineage":["https://openalex.org/I39555362"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Maria Liakata","raw_affiliation_strings":["University of Warwick, United Kingdom"],"affiliations":[{"raw_affiliation_string":"University of Warwick, United Kingdom","institution_ids":["https://openalex.org/I39555362"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067943980","display_name":"Andreas Vlachos","orcid":"https://orcid.org/0000-0003-2123-5071"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andreas Vlachos","raw_affiliation_strings":["University College London, United Kingdom"],"affiliations":[{"raw_affiliation_string":"University College London, United Kingdom","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068777363","display_name":"Stephanie Seneff","orcid":"https://orcid.org/0000-0001-8191-1049"},"institutions":[{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephanie Seneff","raw_affiliation_strings":["Massachusetts Institute of Technology, United States"],"affiliations":[{"raw_affiliation_string":"Massachusetts Institute of Technology, United States","institution_ids":["https://openalex.org/I63966007"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101738630","display_name":"Xiangrong Zhang","orcid":"https://orcid.org/0000-0003-4783-171X"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiangrong Zhang","raw_affiliation_strings":["Xidian University, China"],"affiliations":[{"raw_affiliation_string":"Xidian University, China","institution_ids":["https://openalex.org/I149594827"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5101738630"],"corresponding_institution_ids":["https://openalex.org/I149594827"],"apc_list":null,"apc_paid":null,"fwci":2.4797,"has_fulltext":true,"cited_by_count":29,"citation_normalized_percentile":{"value":0.89764616,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"121","last_page":"126"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/word-embedding","display_name":"Word embedding","score":0.8413428664207458},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.8090413808822632},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.722458004951477},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.6844761967658997},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.6219481825828552},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5384208559989929},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5285709500312805},{"id":"https://openalex.org/keywords/extraction","display_name":"Extraction (chemistry)","score":0.48583313822746277},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.4583214819431305},{"id":"https://openalex.org/keywords/baseline","display_name":"Baseline (sea)","score":0.4399346113204956},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1441417932510376},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.12730824947357178}],"concepts":[{"id":"https://openalex.org/C2777462759","wikidata":"https://www.wikidata.org/wiki/Q18395344","display_name":"Word embedding","level":3,"score":0.8413428664207458},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.8090413808822632},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.722458004951477},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.6844761967658997},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.6219481825828552},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5384208559989929},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5285709500312805},{"id":"https://openalex.org/C4725764","wikidata":"https://www.wikidata.org/wiki/Q844704","display_name":"Extraction (chemistry)","level":2,"score":0.48583313822746277},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.4583214819431305},{"id":"https://openalex.org/C12725497","wikidata":"https://www.wikidata.org/wiki/Q810247","display_name":"Baseline (sea)","level":2,"score":0.4399346113204956},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1441417932510376},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.12730824947357178},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.0},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.18653/v1/w15-3814","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w15-3814","pdf_url":"https://www.aclweb.org/anthology/W15-3814.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of BioNLP 15","raw_type":"proceedings-article"},{"id":"pmh:oai:wrap.warwick.ac.uk:80537","is_oa":false,"landing_page_url":"http://wrap.warwick.ac.uk/80537/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400665","display_name":"Warwick Research Archive Portal (University of Warwick)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I39555362","host_organization_name":"University of Warwick","host_organization_lineage":["https://openalex.org/I39555362"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Item"}],"best_oa_location":{"id":"doi:10.18653/v1/w15-3814","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/w15-3814","pdf_url":"https://www.aclweb.org/anthology/W15-3814.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of BioNLP 15","raw_type":"proceedings-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2251924674.pdf","grobid_xml":"https://content.openalex.org/works/W2251924674.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W1498436455","https://openalex.org/W1988622308","https://openalex.org/W2106921868","https://openalex.org/W2114363816","https://openalex.org/W2121368442","https://openalex.org/W2153579005","https://openalex.org/W2250469303","https://openalex.org/W2916355958","https://openalex.org/W4235765578","https://openalex.org/W4294170691"],"related_works":["https://openalex.org/W4288407670","https://openalex.org/W947140380","https://openalex.org/W2911655849","https://openalex.org/W4286432911","https://openalex.org/W4230884544","https://openalex.org/W4245453790","https://openalex.org/W3194985222","https://openalex.org/W3216571906","https://openalex.org/W4214830338","https://openalex.org/W2518587255"],"abstract_inverted_index":{"Bio-event":[0],"extraction":[1,47],"is":[2,75],"an":[3],"important":[4],"phase":[5],"towards":[6],"the":[7,14,43,50,61,63,69,78],"goal":[8],"of":[9,24,40,71],"extracting":[10],"biological":[11],"networks":[12],"from":[13],"scientific":[15],"literature.":[16],"Recent":[17],"advances":[18],"in":[19,42],"word":[20,25,52],"embedding":[21,53],"make":[22],"computation":[23],"distribution":[26],"more":[27],"efficient":[28],"and":[29,74],"possible.":[30],"In":[31],"this":[32],"study,":[33],"we":[34],"investigate":[35],"methods":[36],"bringing":[37],"distributional":[38],"characteristics":[39],"words":[41],"text":[44],"into":[45],"event":[46],"by":[48,68],"using":[49,56],"latest":[51],"methods.":[54],"By":[55],"bag-ofwords":[57],"(BOW)":[58],"features":[59],"as":[60],"baseline,":[62],"result":[64],"has":[65],"been":[66],"improved":[67],"introduction":[70],"word-embedding":[72],"features,":[73],"comparable":[76],"to":[77],"state-of-the-art":[79],"solution.":[80]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
