{"id":"https://openalex.org/W2985042738","doi":"https://doi.org/10.18653/v1/d19-5718","title":"Using Snomed to recognize and index chemical and drug mentions.","display_name":"Using Snomed to recognize and index chemical and drug mentions.","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2985042738","doi":"https://doi.org/10.18653/v1/d19-5718","mag":"2985042738"},"language":"en","primary_location":{"id":"doi:10.18653/v1/d19-5718","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/d19-5718","pdf_url":"https://www.aclweb.org/anthology/D19-5718.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.aclweb.org/anthology/D19-5718.pdf","any_repository_has_fulltext":null},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071502761","display_name":"Pilar L\u00f3pez\u2010\u00dabeda","orcid":"https://orcid.org/0000-0003-0478-743X"},"institutions":[{"id":"https://openalex.org/I191420491","display_name":"Universidad de Ja\u00e9n","ror":"https://ror.org/0122p5f64","country_code":"ES","type":"education","lineage":["https://openalex.org/I191420491"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Pilar L\u00f3pez \u00dabeda","raw_affiliation_strings":["Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain","institution_ids":["https://openalex.org/I191420491"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103362129","display_name":"Manuel Carlos D\u00edaz Galiano","orcid":null},"institutions":[{"id":"https://openalex.org/I191420491","display_name":"Universidad de Ja\u00e9n","ror":"https://ror.org/0122p5f64","country_code":"ES","type":"education","lineage":["https://openalex.org/I191420491"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Manuel Carlos D\u00edaz Galiano","raw_affiliation_strings":["Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain","institution_ids":["https://openalex.org/I191420491"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016928206","display_name":"Lu\u00eds Alfonso Ure\u00f1a L\u00f3pez","orcid":"https://orcid.org/0000-0001-7540-4059"},"institutions":[{"id":"https://openalex.org/I191420491","display_name":"Universidad de Ja\u00e9n","ror":"https://ror.org/0122p5f64","country_code":"ES","type":"education","lineage":["https://openalex.org/I191420491"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"L. Alfonso Urena Lopez","raw_affiliation_strings":["Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain","institution_ids":["https://openalex.org/I191420491"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110733682","display_name":"Maite Mart\u00edn","orcid":null},"institutions":[{"id":"https://openalex.org/I191420491","display_name":"Universidad de Ja\u00e9n","ror":"https://ror.org/0122p5f64","country_code":"ES","type":"education","lineage":["https://openalex.org/I191420491"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Maite Martin","raw_affiliation_strings":["Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Advanced Studies Center in ICT (CEATIC) Universidad de Ja\u00e9n, Campus Las Lagunillas, 23071, Ja\u00e9n, Spain","institution_ids":["https://openalex.org/I191420491"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5071502761"],"corresponding_institution_ids":["https://openalex.org/I191420491"],"apc_list":null,"apc_paid":null,"fwci":0.4294,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.63026261,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"115","last_page":"120"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9858999848365784,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.971943736076355},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8135144710540771},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.7313374876976013},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.6837835311889648},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6730746030807495},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.6182538866996765},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6122274994850159},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.600450336933136},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.5852585434913635},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5494189262390137},{"id":"https://openalex.org/keywords/index","display_name":"Index (typography)","score":0.5113179683685303},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2134823501110077},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.1688384711742401},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.08397844433784485},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.06930014491081238}],"concepts":[{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.971943736076355},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8135144710540771},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.7313374876976013},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.6837835311889648},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6730746030807495},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.6182538866996765},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6122274994850159},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.600450336933136},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.5852585434913635},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5494189262390137},{"id":"https://openalex.org/C2777382242","wikidata":"https://www.wikidata.org/wiki/Q6017816","display_name":"Index (typography)","level":2,"score":0.5113179683685303},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2134823501110077},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.1688384711742401},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.08397844433784485},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.06930014491081238},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.18653/v1/d19-5718","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/d19-5718","pdf_url":"https://www.aclweb.org/anthology/D19-5718.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","raw_type":"proceedings-article"}],"best_oa_location":{"id":"doi:10.18653/v1/d19-5718","is_oa":true,"landing_page_url":"https://doi.org/10.18653/v1/d19-5718","pdf_url":"https://www.aclweb.org/anthology/D19-5718.pdf","source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of The 5th Workshop on BioNLP Open Shared Tasks","raw_type":"proceedings-article"},"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G2637878912","display_name":null,"funder_award_id":"RTI2018-094653-B-C21","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G6298273575","display_name":null,"funder_award_id":"RTI2018","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G8922915789","display_name":null,"funder_award_id":"(FEDER)","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G8965061176","display_name":null,"funder_award_id":"TIN2015-65136-C2-1-R","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"}],"funders":[{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2985042738.pdf","grobid_xml":"https://content.openalex.org/works/W2985042738.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W77347155","https://openalex.org/W2040298461","https://openalex.org/W2047782770","https://openalex.org/W2048140075","https://openalex.org/W2056616115","https://openalex.org/W2063753566","https://openalex.org/W2094591616","https://openalex.org/W2117479478","https://openalex.org/W2144896636","https://openalex.org/W2145870108","https://openalex.org/W2147880316","https://openalex.org/W2154896031","https://openalex.org/W2163107094","https://openalex.org/W2963625095","https://openalex.org/W2985294119"],"related_works":["https://openalex.org/W4377865234","https://openalex.org/W2334378031","https://openalex.org/W2916255597","https://openalex.org/W3146821131","https://openalex.org/W3091569222","https://openalex.org/W4241018868","https://openalex.org/W2999302224","https://openalex.org/W1495833002","https://openalex.org/W2075635421","https://openalex.org/W2964631078"],"abstract_inverted_index":{"In":[0],"this":[1,48],"paper":[2],"we":[3,74,89],"describe":[4],"a":[5,14,37,60],"new":[6],"named":[7],"entity":[8],"extraction":[9],"system.":[10],"Our":[11],"work":[12],"proposes":[13],"system":[15],"for":[16,47],"the":[17,81,86,96],"identification":[18],"and":[19,32,54,59,84],"annotation":[20],"of":[21,62,65,95],"drug":[22],"names":[23],"in":[24,77,85],"Spanish":[25],"biomedical":[26],"texts":[27],"based":[28],"on":[29,80],"machine":[30],"learning":[31,34],"deep":[33],"models.":[35],"Subsequently,":[36],"standardized":[38],"code":[39],"using":[40],"Snomed":[41,92],"is":[42],"assigned":[43],"to":[44],"these":[45],"drugs,":[46],"purpose,":[49],"Natural":[50],"Language":[51],"Processing":[52],"tools":[53],"techniques":[55],"have":[56],"been":[57,68],"used,":[58],"dictionary":[61],"different":[63],"sources":[64],"information":[66],"has":[67],"built.":[69],"The":[70],"results":[71],"are":[72],"promising,":[73],"obtain":[75],"78%":[76],"F1":[78],"score":[79],"first":[82],"sub-track":[83],"second":[87],"task":[88],"map":[90],"with":[91],"correctly":[93],"72%":[94],"found":[97],"entities.":[98]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
